Definition Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession NC_005125
Length 4,659,019

Click here to switch to the map view.

The map label for this gene is 37522888

Identifier: 37522888

GI number: 37522888

Start: 3517062

End: 3518231

Strand: Reverse

Name: 37522888

Synonym: gll3319

Alternate gene names: NA

Gene position: 3518231-3517062 (Counterclockwise)

Preceding gene: 37522889

Following gene: 37522886

Centisome position: 75.51

GC content: 63.85

Gene sequence:

>1170_bases
ATGGACCAAAAAGAAGGCGCAGGACACCACAAGATTACCGAGGAAGCGACCCGTAAGCTTTTTGGGACGCGCGACACCAT
CGACGGCATGGGCCAGCAGGAGTACTTCCAGCAGCTCGACGAAGGCCAGGAACACGCCGATCGCAGTCCCATCAGCAGCC
CGCTCGACTGGGGGGAGACCTGGAAGCCGCACTGGATGGCCGAGGACGCCCAGCGCGAACACAGCATGGCGGACCCGAAC
CTGAGCCCCGAGCAGAACCTGCAGGCCATCCGCAGCTTTGTAGGCGGGCAGCTCAATAATGCCCACGCCGCCCACAGCGC
CTCGCGCGACTTTGCTGCCCTCGACGGCGACGGCGACGGACACTTAACAAGTACTGAGATCAAAAGCGGCATGGGCGACA
AGAAACTGGCCGAATCGGCAGCCTACCTGAGCCGTGAACTGGGCAATCTCGAAGAACTGAGCAACGACGAATTGGGCGAC
GAGAACGACGGGTTCACCCAAAAAGATCTCCAAAAAGCGGAGATGCGCAGCCTCGGGGCCGCCACCCACGCCCTCGAAGA
CAGCTACAGCAGCGCCCATATGTTCCGCGACACCACCGACCCGTCCGATCCCCACGCCAGGGTCGAAGGCATCAACGTCT
TCAACCCGCTGGACGAAGAGACGACGACGGGGGCGGCAGACGGCGCCGCCGTTGGAGCGCTGTTCGGCGGACTGGCAGGG
GCGCTCGTCGGTGCTGTGGCCGGCGGACTCATCGGGGTCGGCCAGGACGAAGATATGGGCACCCACGATCACCGCTTCGA
CGAAGTGCCGGTGGACGAGGAAGGCCGTCTGGCGCGCGCCTCGGACCTGGCCGCGGCGGCGGCTTCCGCCGAGATGCTCT
CCACGTACTACGAACACCGCGACGACGATGACGCTGCGGCCCACCAGGCGTTCGCGGATAATGTCGCTTCTTTCTATCAG
GCGAGCGACCAGGGTGTGAGCGTCTTCGAAGACAACGACGATCCGGCCTGGCAGCAGGAGCGCGACGAGCGGCTCAACGC
CACCAACAATGTCGCCGACTACGACTGGGTGGGCGGGACGTGCGAAGAGGAGGCGAGCCCAACGGCTTCTGAAGTGCCAG
ACTCAGGCCAGTACGAGTCCTGGGAACCCGAGCAGGAAATTTGCGAATAA

Upstream 100 bases:

>100_bases
CGCAGGTCGGCAGGCCGGTCCTGCCGTAGTGGATTAATCGTAATTTAACCAGGGCCGCCCAAGGCCCGCGCACACGCCCG
CCCCCCGAGAGGACAAAGCC

Downstream 100 bases:

>100_bases
TCCGAGTACTTGGGGTACTGTGCCCTACCCCCCGGCACTCCCATCAGGGCCGGTCTTTGAGCTTGAGTTCCTGTAGCCGG
GCGCGCAGACGGGCCATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MDQKEGAGHHKITEEATRKLFGTRDTIDGMGQQEYFQQLDEGQEHADRSPISSPLDWGETWKPHWMAEDAQREHSMADPN
LSPEQNLQAIRSFVGGQLNNAHAAHSASRDFAALDGDGDGHLTSTEIKSGMGDKKLAESAAYLSRELGNLEELSNDELGD
ENDGFTQKDLQKAEMRSLGAATHALEDSYSSAHMFRDTTDPSDPHARVEGINVFNPLDEETTTGAADGAAVGALFGGLAG
ALVGAVAGGLIGVGQDEDMGTHDHRFDEVPVDEEGRLARASDLAAAAASAEMLSTYYEHRDDDDAAAHQAFADNVASFYQ
ASDQGVSVFEDNDDPAWQQERDERLNATNNVADYDWVGGTCEEEASPTASEVPDSGQYESWEPEQEICE

Sequences:

>Translated_389_residues
MDQKEGAGHHKITEEATRKLFGTRDTIDGMGQQEYFQQLDEGQEHADRSPISSPLDWGETWKPHWMAEDAQREHSMADPN
LSPEQNLQAIRSFVGGQLNNAHAAHSASRDFAALDGDGDGHLTSTEIKSGMGDKKLAESAAYLSRELGNLEELSNDELGD
ENDGFTQKDLQKAEMRSLGAATHALEDSYSSAHMFRDTTDPSDPHARVEGINVFNPLDEETTTGAADGAAVGALFGGLAG
ALVGAVAGGLIGVGQDEDMGTHDHRFDEVPVDEEGRLARASDLAAAAASAEMLSTYYEHRDDDDAAAHQAFADNVASFYQ
ASDQGVSVFEDNDDPAWQQERDERLNATNNVADYDWVGGTCEEEASPTASEVPDSGQYESWEPEQEICE
>Mature_389_residues
MDQKEGAGHHKITEEATRKLFGTRDTIDGMGQQEYFQQLDEGQEHADRSPISSPLDWGETWKPHWMAEDAQREHSMADPN
LSPEQNLQAIRSFVGGQLNNAHAAHSASRDFAALDGDGDGHLTSTEIKSGMGDKKLAESAAYLSRELGNLEELSNDELGD
ENDGFTQKDLQKAEMRSLGAATHALEDSYSSAHMFRDTTDPSDPHARVEGINVFNPLDEETTTGAADGAAVGALFGGLAG
ALVGAVAGGLIGVGQDEDMGTHDHRFDEVPVDEEGRLARASDLAAAAASAEMLSTYYEHRDDDDAAAHQAFADNVASFYQ
ASDQGVSVFEDNDDPAWQQERDERLNATNNVADYDWVGGTCEEEASPTASEVPDSGQYESWEPEQEICE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42097; Mature: 42097

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQKEGAGHHKITEEATRKLFGTRDTIDGMGQQEYFQQLDEGQEHADRSPISSPLDWGET
CCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
WKPHWMAEDAQREHSMADPNLSPEQNLQAIRSFVGGQLNNAHAAHSASRDFAALDGDGDG
CCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEECCCCCC
HLTSTEIKSGMGDKKLAESAAYLSRELGNLEELSNDELGDENDGFTQKDLQKAEMRSLGA
CEEHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
ATHALEDSYSSAHMFRDTTDPSDPHARVEGINVFNPLDEETTTGAADGAAVGALFGGLAG
HHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHH
ALVGAVAGGLIGVGQDEDMGTHDHRFDEVPVDEEGRLARASDLAAAAASAEMLSTYYEHR
HHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
DDDDAAAHQAFADNVASFYQASDQGVSVFEDNDDPAWQQERDERLNATNNVADYDWVGGT
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
CEEEASPTASEVPDSGQYESWEPEQEICE
CCHHCCCCHHHCCCCCCCCCCCCHHHHCC
>Mature Secondary Structure
MDQKEGAGHHKITEEATRKLFGTRDTIDGMGQQEYFQQLDEGQEHADRSPISSPLDWGET
CCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
WKPHWMAEDAQREHSMADPNLSPEQNLQAIRSFVGGQLNNAHAAHSASRDFAALDGDGDG
CCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEECCCCCC
HLTSTEIKSGMGDKKLAESAAYLSRELGNLEELSNDELGDENDGFTQKDLQKAEMRSLGA
CEEHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
ATHALEDSYSSAHMFRDTTDPSDPHARVEGINVFNPLDEETTTGAADGAAVGALFGGLAG
HHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHH
ALVGAVAGGLIGVGQDEDMGTHDHRFDEVPVDEEGRLARASDLAAAAASAEMLSTYYEHR
HHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
DDDDAAAHQAFADNVASFYQASDQGVSVFEDNDDPAWQQERDERLNATNNVADYDWVGGT
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
CEEEASPTASEVPDSGQYESWEPEQEICE
CCHHCCCCHHHCCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA