BacMap

Definition	Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession	NC_005125
Length	4,659,019

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The map label for this gene is vat [H]

Identifier: 37522828

GI number: 37522828

Start: 3463908

End: 3465431

Strand: Reverse

Name: vat [H]

Synonym: gll3259

Alternate gene names: 37522828

Gene position: 3465431-3463908 (Counterclockwise)

Preceding gene: 37522829

Following gene: 37522827

Centisome position: 74.38

GC content: 62.2

Gene sequence:

>1524_bases
GTGGCGATCGTCGTGCATGAACTCGAAGTCTTGATTGAGGCCCGTTATCCCCTCATCTACCTGCTGACTTCTGAGGAGGA
GCGCGCCGAGCAGGCCATCGCCGCCATCTCCCAAATCGAGCCGACGCGCCGGCTCTTTGTCTGGACGCTCACCCACGGCA
TCGTCGAGTACGGATCGGCGCGGGCGCCCGCCCAGCACAACACAGTCTCTCCCCAGGCGGCCATCGAGTGGGTTGTGCGG
CGAGGCGAGCCGGGCATCTTCATCTTCAAGGATCTGCACCCGTTCATCGATCTGGCCCCGGTCAAGCGCTGGCTGCGCGA
TGCTGTGGCCGGCTTCAAGGGCACCGACAAAGTCCTCGTGTTGATGTCGCCGATCCAGCAGATCCCAACCGAATTGGAAA
AAGAGGTCGTCGTCGTCGAATTTCCCCTCCCGGGTCCCGGCGAGTTGAACGAATTGCTGAACGTTCATCTCAGTCAAGCT
CCCGATAAGCTCCGTATCTTGAGTGACGCGGGCCGTGAAAAGCTGGTCAAAGCCGCCCTCGGGCTCACCAAAGACGAAGC
CGACAAGGTCTACCGCAAGGCCGAAGTCGTCTCCGGACGACTCACCGAAGCCGAAGTCGACATCGTCCTCTCCGAAAAAA
AGCAGATCATCAAGCGCAACGGCATCCTCGAATACCTCGAATTCGACGACACCATCGACTCGGTCGGCGGCCTCGCCGAG
CTGAAGCGCTGGCTCACCCAGCGCTCCGACGCCTTCACCGAGCGCGCCCGCCAGTACGGCCTGCCCCAACCCAAGGGATT
ACTGATCCTGGGGGTGCCCGGCTGCGGCAAGTCGCTGATCGCCAAGACCACCGCGCGGCTGTGGGGTCTGCCGCTGCTGC
GCCTCGACATCGGCCGGGTCTACGACGGTTCGATGGTGGGCCGTTCGGAGGCGAACCTGCGCAACGCTCTGCGGGTGGCC
GAATCGATTTCGCCGGTGATTTTGTTTATCGACGAAGTGGACAAGGCGTTCGCGGGGGCGGGGGGTTCGTCGGACTCGGA
CGGCGGGACGTCGATGCGGATTTTCGGTTCGTTTTTGACGTGGATGCAGGAGAAGACCTCTCCGGTGTTCGTGATGGCGA
CGGCGAACCGGGTGGAGCGGTTGCCGAGCGAGTTTTTGCGCAAGGGCCGCTTCGATGAAATCTTCTTCGTCGACCTGCCA
GGCGACACGGAACGCCGGGAAATCGCCCGCATCCACCTTGGCAAGCGGCGCGCCGATACTTCCGGCTTCGACATCGCTGA
GTTGTCCAGCTCGTGCGAGGGCTACTCAGGAGCCGAGATTGAGCAAGGGCTGGTGGCGGCCATGTACGGCGCCTTTGCCC
AGAACCGGGAGTTCAACCAGTTCGACATTCTGGCCGCCCTCAAATCGACAAGGCCCCTTTCTCAAACAATGACCGAGCAA
GTGTCGGCTTTGCGCAATTGGGCGAAGCAGCGTGCCCGGCCGGCCGACAGCATGAGTGCCGATTACCGGCGCATGGAGTT
TTGA

Upstream 100 bases:

>100_bases
CATGGGCAATGAAGACGGGAAGCGGCGAGCGGAGTAATCCGAGTGAGAATAGAGGGGTAAAGGTAGTCTTTGATTACCGA
GCCCTTTCTGCTTCCCAAAG

Downstream 100 bases:

>100_bases
GGAACTCCGGTGCGAACAGCTCTGAGTGGATGGTGGCGGCAAGAGCCTGATCCTGCGGCTTTTAGCGCCCTACCGGACGT
GAATTAAAGTCAACACATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 506

Protein sequence:

>507_residues
MAIVVHELEVLIEARYPLIYLLTSEEERAEQAIAAISQIEPTRRLFVWTLTHGIVEYGSARAPAQHNTVSPQAAIEWVVR
RGEPGIFIFKDLHPFIDLAPVKRWLRDAVAGFKGTDKVLVLMSPIQQIPTELEKEVVVVEFPLPGPGELNELLNVHLSQA
PDKLRILSDAGREKLVKAALGLTKDEADKVYRKAEVVSGRLTEAEVDIVLSEKKQIIKRNGILEYLEFDDTIDSVGGLAE
LKRWLTQRSDAFTERARQYGLPQPKGLLILGVPGCGKSLIAKTTARLWGLPLLRLDIGRVYDGSMVGRSEANLRNALRVA
ESISPVILFIDEVDKAFAGAGGSSDSDGGTSMRIFGSFLTWMQEKTSPVFVMATANRVERLPSEFLRKGRFDEIFFVDLP
GDTERREIARIHLGKRRADTSGFDIAELSSSCEGYSGAEIEQGLVAAMYGAFAQNREFNQFDILAALKSTRPLSQTMTEQ
VSALRNWAKQRARPADSMSADYRRMEF

Sequences:

>Translated_507_residues
MAIVVHELEVLIEARYPLIYLLTSEEERAEQAIAAISQIEPTRRLFVWTLTHGIVEYGSARAPAQHNTVSPQAAIEWVVR
RGEPGIFIFKDLHPFIDLAPVKRWLRDAVAGFKGTDKVLVLMSPIQQIPTELEKEVVVVEFPLPGPGELNELLNVHLSQA
PDKLRILSDAGREKLVKAALGLTKDEADKVYRKAEVVSGRLTEAEVDIVLSEKKQIIKRNGILEYLEFDDTIDSVGGLAE
LKRWLTQRSDAFTERARQYGLPQPKGLLILGVPGCGKSLIAKTTARLWGLPLLRLDIGRVYDGSMVGRSEANLRNALRVA
ESISPVILFIDEVDKAFAGAGGSSDSDGGTSMRIFGSFLTWMQEKTSPVFVMATANRVERLPSEFLRKGRFDEIFFVDLP
GDTERREIARIHLGKRRADTSGFDIAELSSSCEGYSGAEIEQGLVAAMYGAFAQNREFNQFDILAALKSTRPLSQTMTEQ
VSALRNWAKQRARPADSMSADYRRMEF
>Mature_506_residues
AIVVHELEVLIEARYPLIYLLTSEEERAEQAIAAISQIEPTRRLFVWTLTHGIVEYGSARAPAQHNTVSPQAAIEWVVRR
GEPGIFIFKDLHPFIDLAPVKRWLRDAVAGFKGTDKVLVLMSPIQQIPTELEKEVVVVEFPLPGPGELNELLNVHLSQAP
DKLRILSDAGREKLVKAALGLTKDEADKVYRKAEVVSGRLTEAEVDIVLSEKKQIIKRNGILEYLEFDDTIDSVGGLAEL
KRWLTQRSDAFTERARQYGLPQPKGLLILGVPGCGKSLIAKTTARLWGLPLLRLDIGRVYDGSMVGRSEANLRNALRVAE
SISPVILFIDEVDKAFAGAGGSSDSDGGTSMRIFGSFLTWMQEKTSPVFVMATANRVERLPSEFLRKGRFDEIFFVDLPG
DTERREIARIHLGKRRADTSGFDIAELSSSCEGYSGAEIEQGLVAAMYGAFAQNREFNQFDILAALKSTRPLSQTMTEQV
SALRNWAKQRARPADSMSADYRRMEF

Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAA ATPase family. CDC48 subfamily [H]

Homologues:

Organism=Homo sapiens, GI157671927, Length=211, Percent_Identity=35.5450236966825, Blast_Score=109, Evalue=6e-24,
Organism=Homo sapiens, GI45643125, Length=266, Percent_Identity=28.9473684210526, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI45643123, Length=239, Percent_Identity=29.7071129707113, Blast_Score=96, Evalue=9e-20,
Organism=Homo sapiens, GI4507173, Length=218, Percent_Identity=33.0275229357798, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI6005942, Length=241, Percent_Identity=31.5352697095436, Blast_Score=92, Evalue=2e-18,
Organism=Homo sapiens, GI300192933, Length=241, Percent_Identity=30.2904564315353, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI31377644, Length=184, Percent_Identity=30.9782608695652, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI310125280, Length=218, Percent_Identity=28.8990825688073, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI310125282, Length=218, Percent_Identity=28.8990825688073, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI195539395, Length=248, Percent_Identity=27.4193548387097, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI156564401, Length=218, Percent_Identity=28.8990825688073, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI24497435, Length=251, Percent_Identity=27.0916334661355, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI7657689, Length=233, Percent_Identity=29.1845493562232, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI21327685, Length=233, Percent_Identity=29.1845493562232, Blast_Score=78, Evalue=3e-14,
Organism=Homo sapiens, GI24497618, Length=238, Percent_Identity=28.1512605042017, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI21361144, Length=214, Percent_Identity=28.9719626168224, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI7019569, Length=179, Percent_Identity=30.7262569832402, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI24430151, Length=204, Percent_Identity=30.8823529411765, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI89064750, Length=203, Percent_Identity=29.064039408867, Blast_Score=76, Evalue=8e-14,
Organism=Homo sapiens, GI5729991, Length=203, Percent_Identity=29.064039408867, Blast_Score=76, Evalue=8e-14,
Organism=Homo sapiens, GI24430155, Length=203, Percent_Identity=29.064039408867, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI153792536, Length=219, Percent_Identity=28.310502283105, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI229577436, Length=268, Percent_Identity=25.3731343283582, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI4505725, Length=225, Percent_Identity=26.6666666666667, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI17865802, Length=179, Percent_Identity=29.608938547486, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI194018488, Length=129, Percent_Identity=37.2093023255814, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI31742536, Length=270, Percent_Identity=25.9259259259259, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI112789543, Length=270, Percent_Identity=25.9259259259259, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI5901990, Length=288, Percent_Identity=27.0833333333333, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI4506209, Length=250, Percent_Identity=28.4, Blast_Score=66, Evalue=7e-11,
Organism=Escherichia coli, GI1789568, Length=227, Percent_Identity=31.7180616740088, Blast_Score=86, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17508053, Length=271, Percent_Identity=30.2583025830258, Blast_Score=108, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI17532375, Length=217, Percent_Identity=29.9539170506912, Blast_Score=101, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI17531535, Length=186, Percent_Identity=33.8709677419355, Blast_Score=96, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI71994521, Length=266, Percent_Identity=32.3308270676692, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17537217, Length=221, Percent_Identity=30.7692307692308, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI25153574, Length=225, Percent_Identity=28.8888888888889, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17562804, Length=215, Percent_Identity=32.093023255814, Blast_Score=89, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI193209502, Length=224, Percent_Identity=27.6785714285714, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17541224, Length=239, Percent_Identity=28.0334728033473, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17541226, Length=239, Percent_Identity=28.0334728033473, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17554264, Length=204, Percent_Identity=30.3921568627451, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17554786, Length=232, Percent_Identity=28.0172413793103, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71987372, Length=233, Percent_Identity=28.755364806867, Blast_Score=80, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI71987364, Length=233, Percent_Identity=28.755364806867, Blast_Score=80, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17563250, Length=230, Percent_Identity=29.1304347826087, Blast_Score=79, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI25144278, Length=232, Percent_Identity=28.8793103448276, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI25144281, Length=232, Percent_Identity=28.8793103448276, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI86561515, Length=179, Percent_Identity=31.2849162011173, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI115534323, Length=217, Percent_Identity=29.9539170506912, Blast_Score=77, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI133901662, Length=212, Percent_Identity=27.8301886792453, Blast_Score=73, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI133901658, Length=212, Percent_Identity=27.8301886792453, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17508701, Length=208, Percent_Identity=26.9230769230769, Blast_Score=72, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17554784, Length=208, Percent_Identity=28.8461538461538, Blast_Score=72, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI25146157, Length=246, Percent_Identity=28.0487804878049, Blast_Score=72, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17563248, Length=250, Percent_Identity=27.6, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17505546, Length=252, Percent_Identity=25.7936507936508, Blast_Score=66, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6323429, Length=238, Percent_Identity=32.7731092436975, Blast_Score=107, Evalue=6e-24,
Organism=Saccharomyces cerevisiae, GI6320077, Length=216, Percent_Identity=32.4074074074074, Blast_Score=103, Evalue=6e-23,
Organism=Saccharomyces cerevisiae, GI6322994, Length=221, Percent_Identity=30.7692307692308, Blast_Score=97, Evalue=9e-21,
Organism=Saccharomyces cerevisiae, GI6322651, Length=194, Percent_Identity=30.4123711340206, Blast_Score=94, Evalue=6e-20,
Organism=Saccharomyces cerevisiae, GI6324833, Length=248, Percent_Identity=29.4354838709677, Blast_Score=90, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6324000, Length=231, Percent_Identity=28.5714285714286, Blast_Score=87, Evalue=7e-18,
Organism=Saccharomyces cerevisiae, GI6321465, Length=184, Percent_Identity=27.7173913043478, Blast_Score=84, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6319554, Length=215, Percent_Identity=30.6976744186047, Blast_Score=82, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6324691, Length=238, Percent_Identity=29.4117647058824, Blast_Score=81, Evalue=4e-16,
Organism=Saccharomyces cerevisiae, GI6325281, Length=232, Percent_Identity=28.8793103448276, Blast_Score=80, Evalue=6e-16,
Organism=Saccharomyces cerevisiae, GI6323736, Length=203, Percent_Identity=32.512315270936, Blast_Score=80, Evalue=8e-16,
Organism=Saccharomyces cerevisiae, GI6321390, Length=231, Percent_Identity=29.004329004329, Blast_Score=80, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6320854, Length=265, Percent_Identity=29.811320754717, Blast_Score=80, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6320197, Length=203, Percent_Identity=28.0788177339901, Blast_Score=70, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6320602, Length=269, Percent_Identity=29.368029739777, Blast_Score=70, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6322704, Length=219, Percent_Identity=28.7671232876712, Blast_Score=67, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24660075, Length=275, Percent_Identity=31.6363636363636, Blast_Score=106, Evalue=4e-23,
Organism=Drosophila melanogaster, GI281365776, Length=275, Percent_Identity=31.6363636363636, Blast_Score=106, Evalue=5e-23,
Organism=Drosophila melanogaster, GI45552965, Length=275, Percent_Identity=31.6363636363636, Blast_Score=105, Evalue=5e-23,
Organism=Drosophila melanogaster, GI19921202, Length=254, Percent_Identity=33.0708661417323, Blast_Score=99, Evalue=8e-21,
Organism=Drosophila melanogaster, GI161076488, Length=213, Percent_Identity=29.1079812206573, Blast_Score=99, Evalue=8e-21,
Organism=Drosophila melanogaster, GI17137560, Length=213, Percent_Identity=29.1079812206573, Blast_Score=99, Evalue=9e-21,
Organism=Drosophila melanogaster, GI161076486, Length=213, Percent_Identity=29.1079812206573, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24639391, Length=214, Percent_Identity=30.3738317757009, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24652279, Length=183, Percent_Identity=31.1475409836066, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI20129529, Length=190, Percent_Identity=33.6842105263158, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24665814, Length=207, Percent_Identity=30.4347826086957, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI28574878, Length=207, Percent_Identity=30.4347826086957, Blast_Score=89, Evalue=8e-18,
Organism=Drosophila melanogaster, GI24658770, Length=234, Percent_Identity=29.4871794871795, Blast_Score=89, Evalue=1e-17,
Organism=Drosophila melanogaster, GI20129423, Length=182, Percent_Identity=31.8681318681319, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI281363136, Length=223, Percent_Identity=30.0448430493274, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI78707192, Length=223, Percent_Identity=30.0448430493274, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24656825, Length=263, Percent_Identity=26.9961977186312, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24656820, Length=263, Percent_Identity=26.9961977186312, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI18860063, Length=208, Percent_Identity=29.3269230769231, Blast_Score=82, Evalue=7e-16,
Organism=Drosophila melanogaster, GI17738151, Length=211, Percent_Identity=29.3838862559242, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI19920408, Length=251, Percent_Identity=26.6932270916335, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24649446, Length=203, Percent_Identity=31.0344827586207, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI281361487, Length=210, Percent_Identity=27.6190476190476, Blast_Score=79, Evalue=8e-15,
Organism=Drosophila melanogaster, GI24651451, Length=246, Percent_Identity=26.8292682926829, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI18859657, Length=179, Percent_Identity=31.8435754189944, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28573010, Length=217, Percent_Identity=30.4147465437788, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21355121, Length=252, Percent_Identity=26.984126984127, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24640100, Length=252, Percent_Identity=26.5873015873016, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24663015, Length=252, Percent_Identity=26.984126984127, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17137738, Length=249, Percent_Identity=28.5140562248996, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI17864540, Length=216, Percent_Identity=28.7037037037037, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24581396, Length=232, Percent_Identity=28.448275862069, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24644145, Length=191, Percent_Identity=29.8429319371728, Blast_Score=69, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003593
- InterPro:   IPR005938
- InterPro:   IPR003959
- InterPro:   IPR003960
- InterPro:   IPR003338
- InterPro:   IPR004201 [H]

Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 56446; Mature: 56315

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIVVHELEVLIEARYPLIYLLTSEEERAEQAIAAISQIEPTRRLFVWTLTHGIVEYGSA
CEEEHEEHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHCCC
RAPAQHNTVSPQAAIEWVVRRGEPGIFIFKDLHPFIDLAPVKRWLRDAVAGFKGTDKVLV
CCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEE
LMSPIQQIPTELEKEVVVVEFPLPGPGELNELLNVHLSQAPDKLRILSDAGREKLVKAAL
EEHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHH
GLTKDEADKVYRKAEVVSGRLTEAEVDIVLSEKKQIIKRNGILEYLEFDDTIDSVGGLAE
CCCHHHHHHHHHHHHHHCCCCCHHHHHEEHHHHHHHHHHCCCEEEHHHCHHHHHHCCHHH
LKRWLTQRSDAFTERARQYGLPQPKGLLILGVPGCGKSLIAKTTARLWGLPLLRLDIGRV
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCC
YDGSMVGRSEANLRNALRVAESISPVILFIDEVDKAFAGAGGSSDSDGGTSMRIFGSFLT
CCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
WMQEKTSPVFVMATANRVERLPSEFLRKGRFDEIFFVDLPGDTERREIARIHLGKRRADT
HHHHCCCCEEEEECHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCC
SGFDIAELSSSCEGYSGAEIEQGLVAAMYGAFAQNREFNQFDILAALKSTRPLSQTMTEQ
CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHH
VSALRNWAKQRARPADSMSADYRRMEF
HHHHHHHHHHHCCCCCCCCCCHHHCCC
>Mature Secondary Structure 
AIVVHELEVLIEARYPLIYLLTSEEERAEQAIAAISQIEPTRRLFVWTLTHGIVEYGSA
EEEHEEHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHCCC
RAPAQHNTVSPQAAIEWVVRRGEPGIFIFKDLHPFIDLAPVKRWLRDAVAGFKGTDKVLV
CCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEE
LMSPIQQIPTELEKEVVVVEFPLPGPGELNELLNVHLSQAPDKLRILSDAGREKLVKAAL
EEHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHH
GLTKDEADKVYRKAEVVSGRLTEAEVDIVLSEKKQIIKRNGILEYLEFDDTIDSVGGLAE
CCCHHHHHHHHHHHHHHCCCCCHHHHHEEHHHHHHHHHHCCCEEEHHHCHHHHHHCCHHH
LKRWLTQRSDAFTERARQYGLPQPKGLLILGVPGCGKSLIAKTTARLWGLPLLRLDIGRV
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCC
YDGSMVGRSEANLRNALRVAESISPVILFIDEVDKAFAGAGGSSDSDGGTSMRIFGSFLT
CCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
WMQEKTSPVFVMATANRVERLPSEFLRKGRFDEIFFVDLPGDTERREIARIHLGKRRADT
HHHHCCCCEEEEECHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCC
SGFDIAELSSSCEGYSGAEIEQGLVAAMYGAFAQNREFNQFDILAALKSTRPLSQTMTEQ
CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHH
VSALRNWAKQRARPADSMSADYRRMEF
HHHHHHHHHHHCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9119075; 11029001; 10356978 [H]