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The map label for this gene is yjcF [C]

Identifier: 37522760

GI number: 37522760

Start: 3397799

End: 3398377

Strand: Reverse

Name: yjcF [C]

Synonym: gll3191

Alternate gene names: 37522760

Gene position: 3398377-3397799 (Counterclockwise)

Preceding gene: 37522761

Following gene: 37522759

Centisome position: 72.94

GC content: 67.01

Gene sequence:

>579_bases
ATGATCGAAGCAGAAAAGATCAAACAGGGTGAAGTTGAAGACCTGCGCGGCGCCGGCCTCGAAGGCATCGATCTGGCGGG
GGTGCGCCTGGAGCGCCACAACCTGGCCGGGGCCAATCTCACCGGCGCCCACCTGGCGGGTGCTGTCCTGCATTGCGACC
TGTGGGGAGCCAACCTGATGGGGGCCAACCTGAGCGAATCCGACCTGCGCGGCGCCAACCTGCGCGGTGCCAACTTGATG
TCGGCCAATCTTCAAAATGCCAGCCTGGGCGGCGCCAATCTGGAGGGAACCAACCTGATGGGCCTCAACGGCATCGGGGC
CGACTTGCGCCACGCGGATCTGCGCGGAGCGCGGCTGAGCGGGGCGAACCTGGCGGGGGCGGATCTTTCGGGAGCGAATC
TGGCAGGGGCGGACCTGCGCGGCGCCGACCTGGAGGAAGCCAACCTCAGCAGCGCCGCCGTGGCCGGGGCCAGTTTCGCC
GGGGCCAATCTGCTGTGTGCGGATCTAAGCGGGATCGACACCCGTCTGGCCGATTTTGAGGGGGCCTGCCTGGTGGGTAC
GCTTCTCGATGCGGTCTGA

Upstream 100 bases:

>100_bases
GCTCCAGCCTAAAGTTGGTACCGGCCAGTGGTTGCTGCACGCGGCGGCGATGGACGCCTCCGAGGAATCGACAGTCCGTT
GAGTGTGTTGTTAACGAGCG

Downstream 100 bases:

>100_bases
GGTAGGCTGTACACAAATTCGTGCGATTTTACGCTTTTCACCGATGACCCCGAGCAACGGCCAACCGCCCAGCAGCAGCG
ACCGGCTCGACCGCATCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MIEAEKIKQGEVEDLRGAGLEGIDLAGVRLERHNLAGANLTGAHLAGAVLHCDLWGANLMGANLSESDLRGANLRGANLM
SANLQNASLGGANLEGTNLMGLNGIGADLRHADLRGARLSGANLAGADLSGANLAGADLRGADLEEANLSSAAVAGASFA
GANLLCADLSGIDTRLADFEGACLVGTLLDAV

Sequences:

>Translated_192_residues
MIEAEKIKQGEVEDLRGAGLEGIDLAGVRLERHNLAGANLTGAHLAGAVLHCDLWGANLMGANLSESDLRGANLRGANLM
SANLQNASLGGANLEGTNLMGLNGIGADLRHADLRGARLSGANLAGADLSGANLAGADLRGADLEEANLSSAAVAGASFA
GANLLCADLSGIDTRLADFEGACLVGTLLDAV
>Mature_192_residues
MIEAEKIKQGEVEDLRGAGLEGIDLAGVRLERHNLAGANLTGAHLAGAVLHCDLWGANLMGANLSESDLRGANLRGANLM
SANLQNASLGGANLEGTNLMGLNGIGADLRHADLRGARLSGANLAGADLSGANLAGADLRGADLEEANLSSAAVAGASFA
GANLLCADLSGIDTRLADFEGACLVGTLLDAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=146, Percent_Identity=41.0958904109589, Blast_Score=87, Evalue=6e-18,
Organism=Drosophila melanogaster, GI221377802, Length=180, Percent_Identity=33.8888888888889, Blast_Score=82, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 19194; Mature: 19194

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEAEKIKQGEVEDLRGAGLEGIDLAGVRLERHNLAGANLTGAHLAGAVLHCDLWGANLM
CCCCHHCCCCCHHHHHCCCCCCEEEEEEEEECCCCCCCCCCHHHHHCEEEEEECCCCEEC
GANLSESDLRGANLRGANLMSANLQNASLGGANLEGTNLMGLNGIGADLRHADLRGARLS
CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEC
GANLAGADLSGANLAGADLRGADLEEANLSSAAVAGASFAGANLLCADLSGIDTRLADFE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEECCCCCCHHHHCCC
GACLVGTLLDAV
CCHHHHHHHHCC
>Mature Secondary Structure
MIEAEKIKQGEVEDLRGAGLEGIDLAGVRLERHNLAGANLTGAHLAGAVLHCDLWGANLM
CCCCHHCCCCCHHHHHCCCCCCEEEEEEEEECCCCCCCCCCHHHHHCEEEEEECCCCEEC
GANLSESDLRGANLRGANLMSANLQNASLGGANLEGTNLMGLNGIGADLRHADLRGARLS
CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEC
GANLAGADLSGANLAGADLRGADLEEANLSSAAVAGASFAGANLLCADLSGIDTRLADFE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEECCCCCCHHHHCCC
GACLVGTLLDAV
CCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA