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The map label for this gene is yoeB [H]

Identifier: 37522701

GI number: 37522701

Start: 3334690

End: 3334845

Strand: Direct

Name: yoeB [H]

Synonym: gsr3132

Alternate gene names: 37522701

Gene position: 3334690-3334845 (Clockwise)

Preceding gene: 37522700

Following gene: 37522702

Centisome position: 71.57

GC content: 59.62

Gene sequence:

>156_bases
ATGCGCGATCCTTTTCGGGGGCTGGGAAAACCGGAGCCGCTCAAGTACATTGCCAGTAACACCTGGTCCCGGCGCCTCAC
CGCCGAGCATCGGCTGGTCTACCGTGTCGCAGGCGAGCAGATCGATTTTCTGCAGGCCAGGTACCACTACGATTAA

Upstream 100 bases:

>100_bases
GGTCGCCGTCTTTACCACGGCCTTTCGCGAAGATCTTGCCTACTGGATAGCCAACGAACCGAAAACGGCGCTAAGAGCCC
TCGAGCTGGTCAAAGACGTC

Downstream 100 bases:

>100_bases
TTTTTATGGCTGCTCGGAAAACCAATAGCCCTACTGCAGGCGTATTGGTAGACAAAGCCATGCAACGACCAGAGGAGAGA
GGGGGTCGCACCCCCAGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: Endoribonuclease YoeB; Putative mRNA interferase YoeB [H]

Number of amino acids: Translated: 51; Mature: 51

Protein sequence:

>51_residues
MRDPFRGLGKPEPLKYIASNTWSRRLTAEHRLVYRVAGEQIDFLQARYHYD

Sequences:

>Translated_51_residues
MRDPFRGLGKPEPLKYIASNTWSRRLTAEHRLVYRVAGEQIDFLQARYHYD
>Mature_51_residues
MRDPFRGLGKPEPLKYIASNTWSRRLTAEHRLVYRVAGEQIDFLQARYHYD

Specific function: Part of a toxin-antitoxin (TA) module. Has RNase activity and preferentially cleaves at the 3'-end of purine ribonucleotides [H]

COG id: COG4115

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YoeB family [H]

Homologues:

Organism=Escherichia coli, GI87082025, Length=49, Percent_Identity=57.1428571428571, Blast_Score=61, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009614 [H]

Pfam domain/function: PF06769 Plasmid_Txe [H]

EC number: NA

Molecular weight: Translated: 6123; Mature: 6123

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDPFRGLGKPEPLKYIASNTWSRRLTAEHRLVYRVAGEQIDFLQARYHYD
CCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHEECCCCCCCHHHHEECCC
>Mature Secondary Structure
MRDPFRGLGKPEPLKYIASNTWSRRLTAEHRLVYRVAGEQIDFLQARYHYD
CCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHEECCCCCCCHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]