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The map label for this gene is ycf81

Identifier: 37522655

GI number: 37522655

Start: 3287618

End: 3288700

Strand: Direct

Name: ycf81

Synonym: gvip427

Alternate gene names: NA

Gene position: 3287618-3288700 (Clockwise)

Preceding gene: 37522645

Following gene: 37522656

Centisome position: 70.56

GC content: 61.03

Gene sequence:

>1083_bases
ATGTTAGATGTCGCCATCGTTTGCCTTTTCATCCTAGCAGGGGCAGGAATCGGCTTTAACAGCATCGCTTTTCTGCCTTC
CTCCTGGACGGCAAACGCCGACATCAGCGGCGTGCGCTGGGTGACTTTGGGGTTCGGTTTTGTCTTCGGTGCCGCCCTTG
GGGCCGTCGTGCGCTCCGCCTACCGACGCCTGGAGCGCAACATCCGCGAGATGCCCACCGACGCCCTTTTGACCCGCTCG
GTCGGTCTGGTGGGCGGTCTGTTGCTCGCGAACTTTCTGCTCGGTCCCATCTTTTTGTTTCCGTTTCCCGAGTCCCTCGC
GTTCATCAAATTTCTCGCGTCGATTTTGGCGAGTTTGGTGTTTGCGTACCTGGGCATGACCCTCTCCGATGTGCACGGGC
GCACGCTGCTCAGGCGCTTCAATCTCAACAGCCTCAATGCGGGCTCCGAGTCGGGGCAGTTCCGGGGGGACGCCCGCCCC
AAAATCGTCGACACCAGCTGCATCATCGACGGCAGGCTCGAAGAATTGCTGGGCACCGGATTTCTCGAAGGCTATCTGGT
AGTGCCGCGCTTTGTGCTCGACGAATTGCAATTGCTCTCCGACAGCGCCGACGCCGACAGGCGCTCCAAGGGCCGCCGCG
GCCTCGACATCCTCAGCCAGTTGCAGACGGGCTTCGGTGAGCGGCTCGTCCTGCACGAACTCGATTACCCGAAACTTGCC
ACCGTCGACGCCAAATTGGTGCGCCTCACCCAAGATCTCGAAGGGGCGCTTGTCACCAACGATTTCAACCTCAACAAAGT
GGCCAACCTGCAGGGGCTCACCGTCCTCAACGTCAATGACTTGGCCAGCGTGCTCAAGCCGCGCTTTCTGCCCGGGGATC
TGTTGCAGGTGAAGGTGCTGCGCGAAGGCAAAGAACCCCATCAAGGCATCGCCTACCTCGAGGACGGCACGATGGTCGTC
ATCGAAGAAGGCAGCGGCCACATCGGCGAGCAGGCGAGCGTTTCGGTGACCTCGGCTCTGCAGACCTCCGCCGGCCGCAT
GATCTTTGCCCGCCTACAAAACCGCCCTGTGCCCAAGGCTTGA

Upstream 100 bases:

>100_bases
TTTGAGGAAGTGTTGCACAGGGAGGATGCGGGACGGTAGAGGCTATAATCTGTGTGTTCGCCTCGTCCTGTCGTTCCATT
CGCGAGCGGAATTGTTCCGG

Downstream 100 bases:

>100_bases
ACCGGCAGCCGGCAGAGCGCGCGATCAATTGGCGCCAAGATTAATCTGTATCAAAAGTGACCAAGTTTGACTGACTTTGC
GCGGACTGTTTCTCCCCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MLDVAIVCLFILAGAGIGFNSIAFLPSSWTANADISGVRWVTLGFGFVFGAALGAVVRSAYRRLERNIREMPTDALLTRS
VGLVGGLLLANFLLGPIFLFPFPESLAFIKFLASILASLVFAYLGMTLSDVHGRTLLRRFNLNSLNAGSESGQFRGDARP
KIVDTSCIIDGRLEELLGTGFLEGYLVVPRFVLDELQLLSDSADADRRSKGRRGLDILSQLQTGFGERLVLHELDYPKLA
TVDAKLVRLTQDLEGALVTNDFNLNKVANLQGLTVLNVNDLASVLKPRFLPGDLLQVKVLREGKEPHQGIAYLEDGTMVV
IEEGSGHIGEQASVSVTSALQTSAGRMIFARLQNRPVPKA

Sequences:

>Translated_360_residues
MLDVAIVCLFILAGAGIGFNSIAFLPSSWTANADISGVRWVTLGFGFVFGAALGAVVRSAYRRLERNIREMPTDALLTRS
VGLVGGLLLANFLLGPIFLFPFPESLAFIKFLASILASLVFAYLGMTLSDVHGRTLLRRFNLNSLNAGSESGQFRGDARP
KIVDTSCIIDGRLEELLGTGFLEGYLVVPRFVLDELQLLSDSADADRRSKGRRGLDILSQLQTGFGERLVLHELDYPKLA
TVDAKLVRLTQDLEGALVTNDFNLNKVANLQGLTVLNVNDLASVLKPRFLPGDLLQVKVLREGKEPHQGIAYLEDGTMVV
IEEGSGHIGEQASVSVTSALQTSAGRMIFARLQNRPVPKA
>Mature_360_residues
MLDVAIVCLFILAGAGIGFNSIAFLPSSWTANADISGVRWVTLGFGFVFGAALGAVVRSAYRRLERNIREMPTDALLTRS
VGLVGGLLLANFLLGPIFLFPFPESLAFIKFLASILASLVFAYLGMTLSDVHGRTLLRRFNLNSLNAGSESGQFRGDARP
KIVDTSCIIDGRLEELLGTGFLEGYLVVPRFVLDELQLLSDSADADRRSKGRRGLDILSQLQTGFGERLVLHELDYPKLA
TVDAKLVRLTQDLEGALVTNDFNLNKVANLQGLTVLNVNDLASVLKPRFLPGDLLQVKVLREGKEPHQGIAYLEDGTMVV
IEEGSGHIGEQASVSVTSALQTSAGRMIFARLQNRPVPKA

Specific function: Unknown

COG id: COG4956

COG function: function code R; Integral membrane protein (PIN domain superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596
- InterPro:   IPR002792 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 39028; Mature: 39028

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDVAIVCLFILAGAGIGFNSIAFLPSSWTANADISGVRWVTLGFGFVFGAALGAVVRSA
CHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
YRRLERNIREMPTDALLTRSVGLVGGLLLANFLLGPIFLFPFPESLAFIKFLASILASLV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
FAYLGMTLSDVHGRTLLRRFNLNSLNAGSESGQFRGDARPKIVDTSCIIDGRLEELLGTG
HHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECHHEECHHHHHHHCCH
FLEGYLVVPRFVLDELQLLSDSADADRRSKGRRGLDILSQLQTGFGERLVLHELDYPKLA
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCCH
TVDAKLVRLTQDLEGALVTNDFNLNKVANLQGLTVLNVNDLASVLKPRFLPGDLLQVKVL
HHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEECHHHHHHHHCCCCCCCHHHHHHHH
REGKEPHQGIAYLEDGTMVVIEEGSGHIGEQASVSVTSALQTSAGRMIFARLQNRPVPKA
HCCCCCCCCCEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLDVAIVCLFILAGAGIGFNSIAFLPSSWTANADISGVRWVTLGFGFVFGAALGAVVRSA
CHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
YRRLERNIREMPTDALLTRSVGLVGGLLLANFLLGPIFLFPFPESLAFIKFLASILASLV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
FAYLGMTLSDVHGRTLLRRFNLNSLNAGSESGQFRGDARPKIVDTSCIIDGRLEELLGTG
HHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECHHEECHHHHHHHCCH
FLEGYLVVPRFVLDELQLLSDSADADRRSKGRRGLDILSQLQTGFGERLVLHELDYPKLA
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCCH
TVDAKLVRLTQDLEGALVTNDFNLNKVANLQGLTVLNVNDLASVLKPRFLPGDLLQVKVL
HHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEECHHHHHHHHCCCCCCCHHHHHHHH
REGKEPHQGIAYLEDGTMVVIEEGSGHIGEQASVSVTSALQTSAGRMIFARLQNRPVPKA
HCCCCCCCCCEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]