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The map label for this gene is psbH

Identifier: 37522571

GI number: 37522571

Start: 3201105

End: 3201341

Strand: Direct

Name: psbH

Synonym: gvip412

Alternate gene names: 37522571

Gene position: 3201105-3201341 (Clockwise)

Preceding gene: 37522569

Following gene: 37522572

Centisome position: 68.71

GC content: 58.23

Gene sequence:

>237_bases
ATGGCCCGTAGGACCTGGTTAGGAGACCGACTGAAGCCGCTCAACTCCGAGATTGGCAAGGCCAGCCCCGGTTGGGGGAC
CACCCCGATCATGGGAGCTTTGATTGCCCTTTTTGGTGTCTTTCTCATCATCATCCTGCAGATTGCCAACAACTCCTTGC
TGCTTGAAGGCGTCAACGAGGGCGTGCCGCAAAGCCCGGCCGGTCAGGGTTACGGTTACTACCCGCAATCGCGCTAA

Upstream 100 bases:

>100_bases
CGCAGGCTTCTACGATCGCTTCGATCAAAAAGTCCGGGTTTAAGTTGGGTCTCGATAAAATACGTATAATTTAGAAACAT
TCATTGTGACAGGTGCACTG

Downstream 100 bases:

>100_bases
TCTTTTGGAGCTGGAGCCTTCCCCTGTCCCTGGGTGGGCGGGGGCCTGCTCTATACTTGACGAAGCGAGAAGGTCACTTC
GATGGAACTGTTCGGTGTCG

Product: photosystem II reaction center protein H

Products: NA

Alternate protein names: PSII-H

Number of amino acids: Translated: 78; Mature: 77

Protein sequence:

>78_residues
MARRTWLGDRLKPLNSEIGKASPGWGTTPIMGALIALFGVFLIIILQIANNSLLLEGVNEGVPQSPAGQGYGYYPQSR

Sequences:

>Translated_78_residues
MARRTWLGDRLKPLNSEIGKASPGWGTTPIMGALIALFGVFLIIILQIANNSLLLEGVNEGVPQSPAGQGYGYYPQSR
>Mature_77_residues
ARRTWLGDRLKPLNSEIGKASPGWGTTPIMGALIALFGVFLIIILQIANNSLLLEGVNEGVPQSPAGQGYGYYPQSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbH family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBH_GLOVI (Q7NCH7)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_925948.1
- ProteinModelPortal:   Q7NCH7
- SMR:   Q7NCH7
- GeneID:   2601403
- GenomeReviews:   BA000045_GR
- NMPDR:   fig|251221.1.peg.3002
- HOGENOM:   HBG286501
- OMA:   ILQIYNS
- ProtClustDB:   PRK02624
- BioCyc:   GVIO251221:GSR3002-MONOMER
- GO:   GO:0015979
- HAMAP:   MF_00752
- InterPro:   IPR001056
- ProDom:   PD003584

Pfam domain/function: PF00737 PsbH

EC number: NA

Molecular weight: Translated: 8386; Mature: 8255

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x162baa30)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRTWLGDRLKPLNSEIGKASPGWGTTPIMGALIALFGVFLIIILQIANNSLLLEGVNE
CCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
GVPQSPAGQGYGYYPQSR
CCCCCCCCCCCCCCCCCH
>Mature Secondary Structure 
ARRTWLGDRLKPLNSEIGKASPGWGTTPIMGALIALFGVFLIIILQIANNSLLLEGVNE
CCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
GVPQSPAGQGYGYYPQSR
CCCCCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14621292