| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
Click here to switch to the map view.
The map label for this gene is 37522509
Identifier: 37522509
GI number: 37522509
Start: 3134650
End: 3135801
Strand: Direct
Name: 37522509
Synonym: glr2940
Alternate gene names: NA
Gene position: 3134650-3135801 (Clockwise)
Preceding gene: 37522507
Following gene: 37522510
Centisome position: 67.28
GC content: 68.23
Gene sequence:
>1152_bases GTGTCGAAGAAGCGGTTGTTGTGCTTGAGCAACGGTCACGGTGAGGATCTGATCGCCACCCGAATTGCCGAGGCCTTGCT CGCCTACGACATCGAGGTGCTCGCCCTGCCAATTGTCGGTGAGGGGCAGGCCTACCGCGCCCTGGGCATGGAGATCGTCG GCCCGACGCGCACGATGCCCTCGGGGGGCTTCATCTATATGGATGTGCGCGAGCTCTGGAAGGACGTGCGCGGCGGCCTC GGCAAGCTCACCCTCGAACAGTGGCGGACGTTGCGCAGGCTGGCCCCCGGCTGCGATCTGGTCCTGGCGGTGGGCGATGT CGTCGTCCTCACCCTGGCTTACCTGACGGGAGCGCCCTACGCCTTCGTGGGCACCGCCAAGTCCGACTATTACCAGCTGG GGCGGCCCAGCGACTACACGCCGCTGGAGCGCTGGCTGATGACCCGGCCGGCCTGTCTGGCCTCCTACGTGCGCGACCGG CTCACCGCCGAGAACCTCGGCCGCTGGGTGCCGCGGGCGACCTATCTGGGCAACCCGATGATGGACCGGCTGGAGCCGAC CACCACCCTGGCGATACCCGAGGGAGCGCTTGTGGTGCTGTTGTTGCCGGGATCGCGCCCGCCGGAGGCCTATCGCAACC TGGCGCGCATGCTCGAAGTGGTCGAACGGCTGGGGGAGGTGCCGGATAGACCCGTGCATGTGCTGTGCGCCCGGGCGGGC AGCCTGGAGGATGCGGGTATCGGTGCCCACCTGCCTGCCGGCTGGCGCCTCGAAGGAGCGTTGCTGCGCCGGGCGGATCT GGCGGTGCACCTGGAGCGGGGGCGCTTCGCCGAATGCCTGCACCGCGCCCAACTGGCCATCGCCATGGCCGGGACCGCTA CCGAGCAGTGCGTGGGACTCGGCAAACCCGTCTTCACGATGCCCGGCGAGGGGCCGCAGTTTACCTATCGCTTTGCCGAG GCGCAAACGCGGCTATTGGGCGAATCGGTGCAACTGGTGAGCGGCGGTCCCGAGACGCTCGCCCGGCGCATCCAACAGGT GATCGGCGACGCGGAGCTATGCGAGCGCATCCGCCGCAACGGCATCGAACGCATGGGCAGTCCCGGGGCGGCGGACCGCA TTGCCGAGCATTTGATTAAGCACATCGGCTAA
Upstream 100 bases:
>100_bases CTCGGCTTATCCAGTTTAGCGCGGCGCCAGCGGCGACTGGCAGGCGGCTACAATATGCACCAGTAGCGGCGTCGGGCCAG CCGAGGCATCGGGAATACAC
Downstream 100 bases:
>100_bases GGCTGCGGTTCCCTCGCAATGGAGGTGAACAATTTTGGCGCTTTCCCTTAGACTGAAGCTTAACTTTTCTTTGGGTTGAG CTGGTGAAATTCCGGCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MSKKRLLCLSNGHGEDLIATRIAEALLAYDIEVLALPIVGEGQAYRALGMEIVGPTRTMPSGGFIYMDVRELWKDVRGGL GKLTLEQWRTLRRLAPGCDLVLAVGDVVVLTLAYLTGAPYAFVGTAKSDYYQLGRPSDYTPLERWLMTRPACLASYVRDR LTAENLGRWVPRATYLGNPMMDRLEPTTTLAIPEGALVVLLLPGSRPPEAYRNLARMLEVVERLGEVPDRPVHVLCARAG SLEDAGIGAHLPAGWRLEGALLRRADLAVHLERGRFAECLHRAQLAIAMAGTATEQCVGLGKPVFTMPGEGPQFTYRFAE AQTRLLGESVQLVSGGPETLARRIQQVIGDAELCERIRRNGIERMGSPGAADRIAEHLIKHIG
Sequences:
>Translated_383_residues MSKKRLLCLSNGHGEDLIATRIAEALLAYDIEVLALPIVGEGQAYRALGMEIVGPTRTMPSGGFIYMDVRELWKDVRGGL GKLTLEQWRTLRRLAPGCDLVLAVGDVVVLTLAYLTGAPYAFVGTAKSDYYQLGRPSDYTPLERWLMTRPACLASYVRDR LTAENLGRWVPRATYLGNPMMDRLEPTTTLAIPEGALVVLLLPGSRPPEAYRNLARMLEVVERLGEVPDRPVHVLCARAG SLEDAGIGAHLPAGWRLEGALLRRADLAVHLERGRFAECLHRAQLAIAMAGTATEQCVGLGKPVFTMPGEGPQFTYRFAE AQTRLLGESVQLVSGGPETLARRIQQVIGDAELCERIRRNGIERMGSPGAADRIAEHLIKHIG >Mature_382_residues SKKRLLCLSNGHGEDLIATRIAEALLAYDIEVLALPIVGEGQAYRALGMEIVGPTRTMPSGGFIYMDVRELWKDVRGGLG KLTLEQWRTLRRLAPGCDLVLAVGDVVVLTLAYLTGAPYAFVGTAKSDYYQLGRPSDYTPLERWLMTRPACLASYVRDRL TAENLGRWVPRATYLGNPMMDRLEPTTTLAIPEGALVVLLLPGSRPPEAYRNLARMLEVVERLGEVPDRPVHVLCARAGS LEDAGIGAHLPAGWRLEGALLRRADLAVHLERGRFAECLHRAQLAIAMAGTATEQCVGLGKPVFTMPGEGPQFTYRFAEA QTRLLGESVQLVSGGPETLARRIQQVIGDAELCERIRRNGIERMGSPGAADRIAEHLIKHIG
Specific function: Unknown
COG id: COG4370
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41909; Mature: 41778
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKRLLCLSNGHGEDLIATRIAEALLAYDIEVLALPIVGEGQAYRALGMEIVGPTRTMP CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHCCEEECCCCCCC SGGFIYMDVRELWKDVRGGLGKLTLEQWRTLRRLAPGCDLVLAVGDVVVLTLAYLTGAPY CCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCE AFVGTAKSDYYQLGRPSDYTPLERWLMTRPACLASYVRDRLTAENLGRWVPRATYLGNPM EEEECCCHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHH MDRLEPTTTLAIPEGALVVLLLPGSRPPEAYRNLARMLEVVERLGEVPDRPVHVLCARAG HHHCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC SLEDAGIGAHLPAGWRLEGALLRRADLAVHLERGRFAECLHRAQLAIAMAGTATEQCVGL CCCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHC GKPVFTMPGEGPQFTYRFAEAQTRLLGESVQLVSGGPETLARRIQQVIGDAELCERIRRN CCCEEECCCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHC GIERMGSPGAADRIAEHLIKHIG CHHHCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SKKRLLCLSNGHGEDLIATRIAEALLAYDIEVLALPIVGEGQAYRALGMEIVGPTRTMP CCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHCCEEECCCCCCC SGGFIYMDVRELWKDVRGGLGKLTLEQWRTLRRLAPGCDLVLAVGDVVVLTLAYLTGAPY CCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCE AFVGTAKSDYYQLGRPSDYTPLERWLMTRPACLASYVRDRLTAENLGRWVPRATYLGNPM EEEECCCHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHH MDRLEPTTTLAIPEGALVVLLLPGSRPPEAYRNLARMLEVVERLGEVPDRPVHVLCARAG HHHCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC SLEDAGIGAHLPAGWRLEGALLRRADLAVHLERGRFAECLHRAQLAIAMAGTATEQCVGL CCCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHC GKPVFTMPGEGPQFTYRFAEAQTRLLGESVQLVSGGPETLARRIQQVIGDAELCERIRRN CCCEEECCCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHC GIERMGSPGAADRIAEHLIKHIG CHHHCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA