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The map label for this gene is yjcF [C]

Identifier: 37522461

GI number: 37522461

Start: 3085915

End: 3087288

Strand: Reverse

Name: yjcF [C]

Synonym: gll2892

Alternate gene names: 37522461

Gene position: 3087288-3085915 (Counterclockwise)

Preceding gene: 37522468

Following gene: 37522460

Centisome position: 66.26

GC content: 65.14

Gene sequence:

>1374_bases
ATGGCAAAGCTAGAGCACCTGAAAATACTCCTTTGCGGAAGTGCACAGTTCTCGGCGTGGCGGAGGGCCAACGGGGGCAT
TCGGCCCGATTTGTCGGCGGCGGACCTGGGCGGAGCCAACCTGGGTGGAGTCGACCTGGGCGGAGCCAACCTGGGTGGAG
CCGACCTGGACGGAGCCGACCTGGGTGGAGCCGACCTGGGCGGAGCGGATCTGGAAGGGGCGAACCTGGGCGGGGCAAAC
CTAAGCGAGGCAGACTTGAGAGGGGCGAACCTGAACTGGGCGAACCTGAACTGGGCGAACCTAAACTGGGCCGACCTGAG
CGGGGCGGACCTGAATGGGGCGAACCTGAACTGGGCCCACCTGAACTGGGCCGACCTGAGGGAGGCAAACCTGGGCGGGG
CAGAACTGAACAGAGCGAACCTGAGGGAGGCAAACCTGGGCGGGGCGAACCTGAGCGGGGTGAGCCTGAGCAGAGCGTTC
ATGAGCGGGGCGGATCTGCGCGGGGCGGACCTGGGCGGGGCAAACCTAAGCGAGGCGGACCTAGGTGGGGCGAACCTGGG
CGGGGCGAACCTGAAAGGGGCAGACCTGGGCGGGGCGAACCTGGAACGCACGAGTTTGAGGGGGGCGGACCTGCGCGGCG
CGGACTTGCGAAGGACCCGACTCACCGGCTGCTCCCTTGAGGGGGCAGTTTTGGAAGGCTGCCAGGTTTACGGGACCGCT
GCCTGGGACGCCAAAATCGACGAGAGCACCGACCAACGCAACCTCGTCATCACCGACGTGGGCCAGCCCGCGGTGAGCGT
AGACAACTTGAAGATCGCCCGGTTCCTCCACTTGCTGATCGACAACGCCGAGATCCGAGATGCCATCGACGCGATCACCT
TCAAGGCGGTGCTGATCCTGGGGCGCTTCTCGCCGGAGCGCAAGCCCGTCCTCGACGCCCTGCGGGAAGCATTGCGCGAG
CGCGATCACCTGCCTGTCGTGTTCGATCTCGCCACAACCCAAAACCAGGCAGCCACAGAAACGGTCAGGATTTTAGCGGG
CCTGGCGAGGTTTGTCATCGCCGACCTCGCCGACGGCAGGAGCGTTCCTGCGGAGTTGCACTCGATTGTCCCCGACATGG
ATAGCCTGGCGTTCGTGCTCATTGCGGAGGAAGGCAGCCGGGTGCACGGGCAAATCGAGGGGCTCATGCACCGGTCGAAC
GTCGTGGAAGCCGTTTTCGAGTACGGTTCGCCGGAACACCTCCTGGCCTCGCTTGGGGAGGGGGGCGTTGTCCCCGCCGA
GGCGAAGTCCGAGCAATTGCGCGTGAACAAACAAGTGAGGACCCGAAACGAGGGGAACGCGTCGCTGCTCGAGTGTGGCT
GCGCTGAAAGCTAA

Upstream 100 bases:

>100_bases
CCGAGCGCCGGCTTGGCGGGGGACCCGGGGCGATCCGACTGCGTACCGACCCCCCCCGTGCACACATCGAGAAGGGACAC
TAATTTGTGGAGCACCCCCA

Downstream 100 bases:

>100_bases
CAGAACCCAGTCGAGGAGGAGACCCAATGATCTTGATTACCGGCGCCACCGGCAACAACGGGGTGGAAATCGTCCGATTG
CTTGCGCAGAAAAACATCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MAKLEHLKILLCGSAQFSAWRRANGGIRPDLSAADLGGANLGGVDLGGANLGGADLDGADLGGADLGGADLEGANLGGAN
LSEADLRGANLNWANLNWANLNWADLSGADLNGANLNWAHLNWADLREANLGGAELNRANLREANLGGANLSGVSLSRAF
MSGADLRGADLGGANLSEADLGGANLGGANLKGADLGGANLERTSLRGADLRGADLRRTRLTGCSLEGAVLEGCQVYGTA
AWDAKIDESTDQRNLVITDVGQPAVSVDNLKIARFLHLLIDNAEIRDAIDAITFKAVLILGRFSPERKPVLDALREALRE
RDHLPVVFDLATTQNQAATETVRILAGLARFVIADLADGRSVPAELHSIVPDMDSLAFVLIAEEGSRVHGQIEGLMHRSN
VVEAVFEYGSPEHLLASLGEGGVVPAEAKSEQLRVNKQVRTRNEGNASLLECGCAES

Sequences:

>Translated_457_residues
MAKLEHLKILLCGSAQFSAWRRANGGIRPDLSAADLGGANLGGVDLGGANLGGADLDGADLGGADLGGADLEGANLGGAN
LSEADLRGANLNWANLNWANLNWADLSGADLNGANLNWAHLNWADLREANLGGAELNRANLREANLGGANLSGVSLSRAF
MSGADLRGADLGGANLSEADLGGANLGGANLKGADLGGANLERTSLRGADLRGADLRRTRLTGCSLEGAVLEGCQVYGTA
AWDAKIDESTDQRNLVITDVGQPAVSVDNLKIARFLHLLIDNAEIRDAIDAITFKAVLILGRFSPERKPVLDALREALRE
RDHLPVVFDLATTQNQAATETVRILAGLARFVIADLADGRSVPAELHSIVPDMDSLAFVLIAEEGSRVHGQIEGLMHRSN
VVEAVFEYGSPEHLLASLGEGGVVPAEAKSEQLRVNKQVRTRNEGNASLLECGCAES
>Mature_456_residues
AKLEHLKILLCGSAQFSAWRRANGGIRPDLSAADLGGANLGGVDLGGANLGGADLDGADLGGADLGGADLEGANLGGANL
SEADLRGANLNWANLNWANLNWADLSGADLNGANLNWAHLNWADLREANLGGAELNRANLREANLGGANLSGVSLSRAFM
SGADLRGADLGGANLSEADLGGANLGGANLKGADLGGANLERTSLRGADLRGADLRRTRLTGCSLEGAVLEGCQVYGTAA
WDAKIDESTDQRNLVITDVGQPAVSVDNLKIARFLHLLIDNAEIRDAIDAITFKAVLILGRFSPERKPVLDALREALRER
DHLPVVFDLATTQNQAATETVRILAGLARFVIADLADGRSVPAELHSIVPDMDSLAFVLIAEEGSRVHGQIEGLMHRSNV
VEAVFEYGSPEHLLASLGEGGVVPAEAKSEQLRVNKQVRTRNEGNASLLECGCAES

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=153, Percent_Identity=40.5228758169935, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI221377802, Length=156, Percent_Identity=37.1794871794872, Blast_Score=93, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 47715; Mature: 47584

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLEHLKILLCGSAQFSAWRRANGGIRPDLSAADLGGANLGGVDLGGANLGGADLDGAD
CCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCHHCCCCCCCCCEECCCCCCCCCCCCCCC
LGGADLGGADLEGANLGGANLSEADLRGANLNWANLNWANLNWADLSGADLNGANLNWAH
CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEE
LNWADLREANLGGAELNRANLREANLGGANLSGVSLSRAFMSGADLRGADLGGANLSEAD
CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
LGGANLGGANLKGADLGGANLERTSLRGADLRGADLRRTRLTGCSLEGAVLEGCQVYGTA
CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHEECCCCCCCHHHCCCEEEEEE
AWDAKIDESTDQRNLVITDVGQPAVSVDNLKIARFLHLLIDNAEIRDAIDAITFKAVLIL
ECCCCCCCCCCCCCEEEEECCCCCEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
GRFSPERKPVLDALREALRERDHLPVVFDLATTQNQAATETVRILAGLARFVIADLADGR
HCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
SVPAELHSIVPDMDSLAFVLIAEEGSRVHGQIEGLMHRSNVVEAVFEYGSPEHLLASLGE
CCHHHHHHHCCCCCCEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC
GGVVPAEAKSEQLRVNKQVRTRNEGNASLLECGCAES
CCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCC
>Mature Secondary Structure 
AKLEHLKILLCGSAQFSAWRRANGGIRPDLSAADLGGANLGGVDLGGANLGGADLDGAD
CCCCEEEEEEECCCHHHHHHHCCCCCCCCCCHHCCCCCCCCCEECCCCCCCCCCCCCCC
LGGADLGGADLEGANLGGANLSEADLRGANLNWANLNWANLNWADLSGADLNGANLNWAH
CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEE
LNWADLREANLGGAELNRANLREANLGGANLSGVSLSRAFMSGADLRGADLGGANLSEAD
CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
LGGANLGGANLKGADLGGANLERTSLRGADLRGADLRRTRLTGCSLEGAVLEGCQVYGTA
CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHEECCCCCCCHHHCCCEEEEEE
AWDAKIDESTDQRNLVITDVGQPAVSVDNLKIARFLHLLIDNAEIRDAIDAITFKAVLIL
ECCCCCCCCCCCCCEEEEECCCCCEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
GRFSPERKPVLDALREALRERDHLPVVFDLATTQNQAATETVRILAGLARFVIADLADGR
HCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
SVPAELHSIVPDMDSLAFVLIAEEGSRVHGQIEGLMHRSNVVEAVFEYGSPEHLLASLGE
CCHHHHHHHCCCCCCEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC
GGVVPAEAKSEQLRVNKQVRTRNEGNASLLECGCAES
CCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA