| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37522458
Identifier: 37522458
GI number: 37522458
Start: 3083198
End: 3084187
Strand: Direct
Name: 37522458
Synonym: glr2889
Alternate gene names: NA
Gene position: 3083198-3084187 (Clockwise)
Preceding gene: 37522456
Following gene: 37522462
Centisome position: 66.18
GC content: 64.24
Gene sequence:
>990_bases ATGGCCGACGTCTCGCTTGAACAACTCGACCGCCTACTTAAAATTGACCGGCTCGTCCGCCTCGGGCAGGCGCGCAGCAC CGCCCAACTCGCCCGAGCCCTCGGGGTGAGCACCGGTACCGTGCAGCGGGCCTTGCTGACTCTGCGCGACGAATACGGTG CGCCGCTGGTGGTCGATCGGGTCCGCGGCTACGTCTACCGCGAAACCACCTGGCAACTGCCGCCCTTGCCCCTTACCCAG GGCGAACTGTTCGTGCTGATGGCCGGCAACCGTCTACTCGCCGCTGCCGAAGGCACCCTCTACGAACAGCAAATCCAGTC GGCCATCGCCCAACTGGTGCACCATCTGCCCAAACTCGCCTGGGTGGACCTGGAGACGGTGCGCGACTACCTGCACACCA GTGCCGAACTGCCCGCCACTTTCAACGATTTCGAAGTCTGGCAACAACTGGGCGACGCCTTCGAATCGGGCCTGCAGACT TTGATTGGCTACGCCGCCCCCGGCGAGGTACCCATCACCCGCCAGGTCAACCCTTATTTGCTCTACGTCTGGCGCGGCTA CGAGCCGTACCTGATTGGCTACGACCTGGGCACCAAACAATTCGAAGCCTTCAGAGTCGACCGCATCCAAGTCATGCAGA CATTGGGCGACAAGTTCACCCGCGACCCGGCCTTTGACCCCCGGCCGGTCATCGACAAAATTAATCAACTGCAACTGGGC ACCGCCGTCACCCGGGTGAGCGTGCGCCTTACCCCCAGAGCGGCCCGGGCCTTGCGCGGCCGGTTGCTCCACCCGACCCA GGTGAGCACCACCCTCGCGGACGGTTCGCTCAGGCTGCAGATGCACGTCTCGGAACTCGAAGATCTCAAGCGCTGGGTGC TCGGTTTTGGGGCCGAGGCCGTCGTCGAAGAACCCCGAGCGCTCGTGGAGCAAATCCGCGCCGAACTCGGCAAACTCAGT GCCCTCTACGGTGCGCCGGTGGCGCGCTGA
Upstream 100 bases:
>100_bases TCAGTCTATCTGAACTTCCCATTTCTTTATCCAACGTCCATAGCCGTCGAAATTTCCCTATGGAACACTCGGTACTCTCG CGCGGGGGACAGCATTACCC
Downstream 100 bases:
>100_bases CCACCCCTGCCATCAATTTTCATCTTCGGTGGCTGTCGCTTCGGTGTAGTCCTGCCCTGCTTCGGCGGGTGAGGGATCGC GGCGCCGCCTACGGTCGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator-Like Protein; Regulatory Protein DeoR; Transcriptional Regulator; HTH Domain Protein; Transcriptional Regulator-Like; Transcriptional Regulator Protein-Like Protein
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MADVSLEQLDRLLKIDRLVRLGQARSTAQLARALGVSTGTVQRALLTLRDEYGAPLVVDRVRGYVYRETTWQLPPLPLTQ GELFVLMAGNRLLAAAEGTLYEQQIQSAIAQLVHHLPKLAWVDLETVRDYLHTSAELPATFNDFEVWQQLGDAFESGLQT LIGYAAPGEVPITRQVNPYLLYVWRGYEPYLIGYDLGTKQFEAFRVDRIQVMQTLGDKFTRDPAFDPRPVIDKINQLQLG TAVTRVSVRLTPRAARALRGRLLHPTQVSTTLADGSLRLQMHVSELEDLKRWVLGFGAEAVVEEPRALVEQIRAELGKLS ALYGAPVAR
Sequences:
>Translated_329_residues MADVSLEQLDRLLKIDRLVRLGQARSTAQLARALGVSTGTVQRALLTLRDEYGAPLVVDRVRGYVYRETTWQLPPLPLTQ GELFVLMAGNRLLAAAEGTLYEQQIQSAIAQLVHHLPKLAWVDLETVRDYLHTSAELPATFNDFEVWQQLGDAFESGLQT LIGYAAPGEVPITRQVNPYLLYVWRGYEPYLIGYDLGTKQFEAFRVDRIQVMQTLGDKFTRDPAFDPRPVIDKINQLQLG TAVTRVSVRLTPRAARALRGRLLHPTQVSTTLADGSLRLQMHVSELEDLKRWVLGFGAEAVVEEPRALVEQIRAELGKLS ALYGAPVAR >Mature_328_residues ADVSLEQLDRLLKIDRLVRLGQARSTAQLARALGVSTGTVQRALLTLRDEYGAPLVVDRVRGYVYRETTWQLPPLPLTQG ELFVLMAGNRLLAAAEGTLYEQQIQSAIAQLVHHLPKLAWVDLETVRDYLHTSAELPATFNDFEVWQQLGDAFESGLQTL IGYAAPGEVPITRQVNPYLLYVWRGYEPYLIGYDLGTKQFEAFRVDRIQVMQTLGDKFTRDPAFDPRPVIDKINQLQLGT AVTRVSVRLTPRAARALRGRLLHPTQVSTTLADGSLRLQMHVSELEDLKRWVLGFGAEAVVEEPRALVEQIRAELGKLSA LYGAPVAR
Specific function: Unknown
COG id: COG2378
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36839; Mature: 36708
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADVSLEQLDRLLKIDRLVRLGQARSTAQLARALGVSTGTVQRALLTLRDEYGAPLVVDR CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEHH VRGYVYRETTWQLPPLPLTQGELFVLMAGNRLLAAAEGTLYEQQIQSAIAQLVHHLPKLA HCCEEEECCCCCCCCCCCCCCCEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH WVDLETVRDYLHTSAELPATFNDFEVWQQLGDAFESGLQTLIGYAAPGEVPITRQVNPYL EEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEE LYVWRGYEPYLIGYDLGTKQFEAFRVDRIQVMQTLGDKFTRDPAFDPRPVIDKINQLQLG EEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH TAVTRVSVRLTPRAARALRGRLLHPTQVSTTLADGSLRLQMHVSELEDLKRWVLGFGAEA HHEEEEEEEECHHHHHHHHCCCCCCCHHHHEECCCEEEEEEEHHHHHHHHHHHHHCCCHH VVEEPRALVEQIRAELGKLSALYGAPVAR HHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ADVSLEQLDRLLKIDRLVRLGQARSTAQLARALGVSTGTVQRALLTLRDEYGAPLVVDR CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEHH VRGYVYRETTWQLPPLPLTQGELFVLMAGNRLLAAAEGTLYEQQIQSAIAQLVHHLPKLA HCCEEEECCCCCCCCCCCCCCCEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH WVDLETVRDYLHTSAELPATFNDFEVWQQLGDAFESGLQTLIGYAAPGEVPITRQVNPYL EEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEE LYVWRGYEPYLIGYDLGTKQFEAFRVDRIQVMQTLGDKFTRDPAFDPRPVIDKINQLQLG EEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH TAVTRVSVRLTPRAARALRGRLLHPTQVSTTLADGSLRLQMHVSELEDLKRWVLGFGAEA HHEEEEEEEECHHHHHHHHCCCCCCCHHHHEECCCEEEEEEEHHHHHHHHHHHHHCCCHH VVEEPRALVEQIRAELGKLSALYGAPVAR HHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA