| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is pksJ [H]
Identifier: 37522418
GI number: 37522418
Start: 3037935
End: 3040349
Strand: Direct
Name: pksJ [H]
Synonym: glr2849
Alternate gene names: 37522418
Gene position: 3037935-3040349 (Clockwise)
Preceding gene: 37522417
Following gene: 37522419
Centisome position: 65.21
GC content: 65.05
Gene sequence:
>2415_bases ATGTTCACTCCCTCAGCCCATCCGCTCTGTCTGATTGCTGGCGACGATGGCAGGGTCGGCGCCTCCCTGGCGCGGCTTCT GGCCGAACGGGGATGGAAGGTGGTGATGCTCACCTCGGTGCACGATGGCGATGGGGAAGCGCAGCCGGCCGACGGAATGG AGAGGACCATCCTGGCGCCCGAAGCTGAACAGGCCGAGCAGGTGCGCTCGTTGCAGGAGCGCCACGGACCCCTCGGGGTG TTTATCTATCTGCATCCGGTGCTGCCCCCAGGGGCTACTGCCCACAGCTTTATCAGCGCCGCGGACAGAGAACCGATCGA GCGGGTGTTTCTGCTGCTGCGGCATCTGAGAAGCCCTTTGCAGCGGGCGGCCGAGGCCGGAGGTCGTGGCGCACTGTTAA TGGTCGCCCGCCTGGACGGGGCACTCGGCCTGGGCGCAAACGGCGCCTTCCGGCCTGCCTCAGGAGCGCTTTTTGGCCTG GGCAAAACCTTGCGCCAGGAATGGCCGCAGGTTTTCTGCCGAACTGTCGATCTCGACCCCGAGATCGCGGATGAGCAAGC TGCCCGTCACATCCTGGCGGAGTTGCACGACCCGGATATCACCCTGGCGGAGACGGGCTACGGCTGGCAAGGAAGGGTCA CCCTCGTTGCCGCACCCGCCATGGTACCGGCTTTGCCGGCGGAACCCGCCGCTATTCGCCCCGAATCGGTTTTTGTGGTG AGCGGTGGGGGCAGGGGCATCACCGCCCGCTGTGCCGTCGAGATGGCCAGGCTCTACCGCTGCCGCTTCGTGCTGTTGGG CCGCTCGGGGCTTGAGCCTGTGCCCGACTGGGCCTGGGGGTCGGACGAAGCGGCTCTGAAGCGGCGGCTACTTGCTGAGG CGACCGCGCGCGGCGAGAAGCTTTCCCCGCCTGCTCTCGAATCTGCTTGCCGGGATCTAGCCGCCCGGCAGGAAATTCAA TCGACTCTGCGGGCAATCGAACAGGCGGGGGGGCAGGCCCTTTACGCCTGCGCCGATGTGACGAACGCCGAGGCCGTCAA GGCGGCCATTGAAGCGGCAACGCTCCAGCTTGGCCCGGTGACGGGCGTCATCCACGGGGCGGGCAGCCTGGCCGACAAAC GCCTTGAAAAAAAGACCGCCCGGGATTTCGCAGCCGTCTACGGTCCAAAAGTCGAAGGGCTTGCCAATCTGCTGGCGGCC GTGCCCCCGGAACAGCTGGAGTACCTGGTGCTTTTTTCCTCGGTGGCCGCTTTCTTCGGCAACCTGGGCCAGGCGGATTA CGCCCTGGCAAACGAAGTGCTCAACAAAGCGGCCCACCGCCTCAAGCGGCTCTTCCCGGCCTGCCGGGTGCTGGCGCTCA ACTGGGGGCCGTGGGACGGGGGGATGGTGAGCGCCGAACTCAAGCGTTCCTTCGAGCGCCAACAGATCGCCGTAATCCCT CCCCAGGCCGGTGCCAAAGCGTTCCTGGCCGAACTGGCCACAGCCGACGGACAGCCCCTGCAGCGGATCATCGGCAGTCC GCTGGTGCAACCCCCGGCTCACATCGAACCGGCAGCGCGCCGCGTGCGCATCGAAAGGCGGCTGAATCTGGCGGACAATC CCTTCCTGCCGGATCACGCGATCGCGGGTAAGCCCGTGTTGCCGTTTACCTGCGCTTTTGCCTGGATCGCCGCCGCCTGC GAGCAAGTGTGCCCCGGCTATACCGCCTATTGCTACGAAGAAGCCCGCATCCTCAAAGGTATCGTCATGGGCAGCGAGCA GGATCACCTTTGCACCCTGGAACTGGAGGAAATACCCGCTCCCACCGAGGGCCGGCTGCAATTTCTGGCCAAGATTTCAA GCCGGAGCAGCCGGGGCAAAGCCGTCTTTCATTACGCCTGCCGGGTGACGCTTGCGCGGCAATGGCCCGATGGCGACATC AAGCCGGACGGTCTGTCTTCCAGACCAACCGGCGTGGACGCGAGCCCGTTCTATGCAAGCGGTGTTCTCTTTCACGGCCC CTGCTTTCAGGGGATCGAGCGGCTGCTGACCATCGATGCGGACGGGCTGAGCCTGCAGTGCCGACTACCGCCCATCGACC GGCGCACCCAGGGTCAGTTTCCCGTCCGCTTCCACAACCCCTTTGCGCTCGATGTGCAGTTGCAGGGGATGCTCATCTGG ACCCACAGATACTGCCACAAAGGTTGCCTGCCCACCCGGGTCGAACGTTACGAGCAGTTTGCCCCCATGCCTTTCGGCGA ACCGTTCTACGTCCGTCTGCAGGTGCAAAATCGCGGCGCGAACAGCGTCACTGTCGATCTCACGGCGCACGCCGCCGCCG GCCGGATTCTCAGCCGCCTGCACAGTCTGCAAGGAACCTTGAGCGAACGTCTACAGCACCAGTTCCAGGCCCGGTCCGAG CAACAACTGCACTAA
Upstream 100 bases:
>100_bases ATTGAGCCCCGGATCCGGACAGCCGACACCCCCCCTGCTGATCCCGGCCCTTTCGCGCTGTCTTGTTGAACTCCAGACAC TGCCGCAACCCGACTGCCTG
Downstream 100 bases:
>100_bases ACGGTAGTGTCCAAGCTCACTTTTTTTGGAGTCAGTCCATGGCATTCATCGACAATTTCGACACGGACAACCCCGCCGCC GCCGGTCCCACGGTCGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: PKS [H]
Number of amino acids: Translated: 804; Mature: 804
Protein sequence:
>804_residues MFTPSAHPLCLIAGDDGRVGASLARLLAERGWKVVMLTSVHDGDGEAQPADGMERTILAPEAEQAEQVRSLQERHGPLGV FIYLHPVLPPGATAHSFISAADREPIERVFLLLRHLRSPLQRAAEAGGRGALLMVARLDGALGLGANGAFRPASGALFGL GKTLRQEWPQVFCRTVDLDPEIADEQAARHILAELHDPDITLAETGYGWQGRVTLVAAPAMVPALPAEPAAIRPESVFVV SGGGRGITARCAVEMARLYRCRFVLLGRSGLEPVPDWAWGSDEAALKRRLLAEATARGEKLSPPALESACRDLAARQEIQ STLRAIEQAGGQALYACADVTNAEAVKAAIEAATLQLGPVTGVIHGAGSLADKRLEKKTARDFAAVYGPKVEGLANLLAA VPPEQLEYLVLFSSVAAFFGNLGQADYALANEVLNKAAHRLKRLFPACRVLALNWGPWDGGMVSAELKRSFERQQIAVIP PQAGAKAFLAELATADGQPLQRIIGSPLVQPPAHIEPAARRVRIERRLNLADNPFLPDHAIAGKPVLPFTCAFAWIAAAC EQVCPGYTAYCYEEARILKGIVMGSEQDHLCTLELEEIPAPTEGRLQFLAKISSRSSRGKAVFHYACRVTLARQWPDGDI KPDGLSSRPTGVDASPFYASGVLFHGPCFQGIERLLTIDADGLSLQCRLPPIDRRTQGQFPVRFHNPFALDVQLQGMLIW THRYCHKGCLPTRVERYEQFAPMPFGEPFYVRLQVQNRGANSVTVDLTAHAAAGRILSRLHSLQGTLSERLQHQFQARSE QQLH
Sequences:
>Translated_804_residues MFTPSAHPLCLIAGDDGRVGASLARLLAERGWKVVMLTSVHDGDGEAQPADGMERTILAPEAEQAEQVRSLQERHGPLGV FIYLHPVLPPGATAHSFISAADREPIERVFLLLRHLRSPLQRAAEAGGRGALLMVARLDGALGLGANGAFRPASGALFGL GKTLRQEWPQVFCRTVDLDPEIADEQAARHILAELHDPDITLAETGYGWQGRVTLVAAPAMVPALPAEPAAIRPESVFVV SGGGRGITARCAVEMARLYRCRFVLLGRSGLEPVPDWAWGSDEAALKRRLLAEATARGEKLSPPALESACRDLAARQEIQ STLRAIEQAGGQALYACADVTNAEAVKAAIEAATLQLGPVTGVIHGAGSLADKRLEKKTARDFAAVYGPKVEGLANLLAA VPPEQLEYLVLFSSVAAFFGNLGQADYALANEVLNKAAHRLKRLFPACRVLALNWGPWDGGMVSAELKRSFERQQIAVIP PQAGAKAFLAELATADGQPLQRIIGSPLVQPPAHIEPAARRVRIERRLNLADNPFLPDHAIAGKPVLPFTCAFAWIAAAC EQVCPGYTAYCYEEARILKGIVMGSEQDHLCTLELEEIPAPTEGRLQFLAKISSRSSRGKAVFHYACRVTLARQWPDGDI KPDGLSSRPTGVDASPFYASGVLFHGPCFQGIERLLTIDADGLSLQCRLPPIDRRTQGQFPVRFHNPFALDVQLQGMLIW THRYCHKGCLPTRVERYEQFAPMPFGEPFYVRLQVQNRGANSVTVDLTAHAAAGRILSRLHSLQGTLSERLQHQFQARSE QQLH >Mature_804_residues MFTPSAHPLCLIAGDDGRVGASLARLLAERGWKVVMLTSVHDGDGEAQPADGMERTILAPEAEQAEQVRSLQERHGPLGV FIYLHPVLPPGATAHSFISAADREPIERVFLLLRHLRSPLQRAAEAGGRGALLMVARLDGALGLGANGAFRPASGALFGL GKTLRQEWPQVFCRTVDLDPEIADEQAARHILAELHDPDITLAETGYGWQGRVTLVAAPAMVPALPAEPAAIRPESVFVV SGGGRGITARCAVEMARLYRCRFVLLGRSGLEPVPDWAWGSDEAALKRRLLAEATARGEKLSPPALESACRDLAARQEIQ STLRAIEQAGGQALYACADVTNAEAVKAAIEAATLQLGPVTGVIHGAGSLADKRLEKKTARDFAAVYGPKVEGLANLLAA VPPEQLEYLVLFSSVAAFFGNLGQADYALANEVLNKAAHRLKRLFPACRVLALNWGPWDGGMVSAELKRSFERQQIAVIP PQAGAKAFLAELATADGQPLQRIIGSPLVQPPAHIEPAARRVRIERRLNLADNPFLPDHAIAGKPVLPFTCAFAWIAAAC EQVCPGYTAYCYEEARILKGIVMGSEQDHLCTLELEEIPAPTEGRLQFLAKISSRSSRGKAVFHYACRVTLARQWPDGDI KPDGLSSRPTGVDASPFYASGVLFHGPCFQGIERLLTIDADGLSLQCRLPPIDRRTQGQFPVRFHNPFALDVQLQGMLIW THRYCHKGCLPTRVERYEQFAPMPFGEPFYVRLQVQNRGANSVTVDLTAHAAAGRILSRLHSLQGTLSERLQHQFQARSE QQLH
Specific function: Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 acyl carrier domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010071 - InterPro: IPR009081 - InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR000794 - InterPro: IPR001242 - InterPro: IPR018201 - InterPro: IPR014031 - InterPro: IPR014030 - InterPro: IPR016040 - InterPro: IPR006163 - InterPro: IPR020842 - InterPro: IPR020841 - InterPro: IPR020807 - InterPro: IPR013968 - InterPro: IPR020806 - InterPro: IPR006162 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF00501 AMP-binding; PF00668 Condensation; PF00109 ketoacyl-synt; PF02801 Ketoacyl-synt_C; PF08659 KR; PF00550 PP-binding [H]
EC number: NA
Molecular weight: Translated: 87214; Mature: 87214
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTPSAHPLCLIAGDDGRVGASLARLLAERGWKVVMLTSVHDGDGEAQPADGMERTILAP CCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCEEECC EAEQAEQVRSLQERHGPLGVFIYLHPVLPPGATAHSFISAADREPIERVFLLLRHLRSPL CHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH QRAAEAGGRGALLMVARLDGALGLGANGAFRPASGALFGLGKTLRQEWPQVFCRTVDLDP HHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC EIADEQAARHILAELHDPDITLAETGYGWQGRVTLVAAPAMVPALPAEPAAIRPESVFVV CCCHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEE SGGGRGITARCAVEMARLYRCRFVLLGRSGLEPVPDWAWGSDEAALKRRLLAEATARGEK ECCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC LSPPALESACRDLAARQEIQSTLRAIEQAGGQALYACADVTNAEAVKAAIEAATLQLGPV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHEEECCC TGVIHGAGSLADKRLEKKTARDFAAVYGPKVEGLANLLAAVPPEQLEYLVLFSSVAAFFG EEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC NLGQADYALANEVLNKAAHRLKRLFPACRVLALNWGPWDGGMVSAELKRSFERQQIAVIP CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEHHHHHHHHHCEEEEEC PQAGAKAFLAELATADGQPLQRIIGSPLVQPPAHIEPAARRVRIERRLNLADNPFLPDHA CCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC IAGKPVLPFTCAFAWIAAACEQVCPGYTAYCYEEARILKGIVMGSEQDHLCTLELEEIPA CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCC PTEGRLQFLAKISSRSSRGKAVFHYACRVTLARQWPDGDIKPDGLSSRPTGVDASPFYAS CCHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHC GVLFHGPCFQGIERLLTIDADGLSLQCRLPPIDRRTQGQFPVRFHNPFALDVQLQGMLIW CEEEECHHHHHHHHHEEECCCCCEEEEECCCCCCCCCCCCCEEECCCEEEEEEECCEEEE THRYCHKGCLPTRVERYEQFAPMPFGEPFYVRLQVQNRGANSVTVDLTAHAAAGRILSRL EHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEEEECHHHHHHHHHHH HSLQGTLSERLQHQFQARSEQQLH HHHHHHHHHHHHHHHHHCHHCCCC >Mature Secondary Structure MFTPSAHPLCLIAGDDGRVGASLARLLAERGWKVVMLTSVHDGDGEAQPADGMERTILAP CCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCEEECC EAEQAEQVRSLQERHGPLGVFIYLHPVLPPGATAHSFISAADREPIERVFLLLRHLRSPL CHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH QRAAEAGGRGALLMVARLDGALGLGANGAFRPASGALFGLGKTLRQEWPQVFCRTVDLDP HHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC EIADEQAARHILAELHDPDITLAETGYGWQGRVTLVAAPAMVPALPAEPAAIRPESVFVV CCCHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEE SGGGRGITARCAVEMARLYRCRFVLLGRSGLEPVPDWAWGSDEAALKRRLLAEATARGEK ECCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC LSPPALESACRDLAARQEIQSTLRAIEQAGGQALYACADVTNAEAVKAAIEAATLQLGPV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHEEECCC TGVIHGAGSLADKRLEKKTARDFAAVYGPKVEGLANLLAAVPPEQLEYLVLFSSVAAFFG EEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC NLGQADYALANEVLNKAAHRLKRLFPACRVLALNWGPWDGGMVSAELKRSFERQQIAVIP CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEHHHHHHHHHCEEEEEC PQAGAKAFLAELATADGQPLQRIIGSPLVQPPAHIEPAARRVRIERRLNLADNPFLPDHA CCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC IAGKPVLPFTCAFAWIAAACEQVCPGYTAYCYEEARILKGIVMGSEQDHLCTLELEEIPA CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCC PTEGRLQFLAKISSRSSRGKAVFHYACRVTLARQWPDGDIKPDGLSSRPTGVDASPFYAS CCHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHC GVLFHGPCFQGIERLLTIDADGLSLQCRLPPIDRRTQGQFPVRFHNPFALDVQLQGMLIW CEEEECHHHHHHHHHEEECCCCCEEEEECCCCCCCCCCCCCEEECCCEEEEEEECCEEEE THRYCHKGCLPTRVERYEQFAPMPFGEPFYVRLQVQNRGANSVTVDLTAHAAAGRILSRL EHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEEEECHHHHHHHHHHH HSLQGTLSERLQHQFQARSEQQLH HHHHHHHHHHHHHHHHHCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7704258; 9384377; 10568751 [H]