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The map label for this gene is ubiF [C]

Identifier: 37522396

GI number: 37522396

Start: 3009060

End: 3010334

Strand: Reverse

Name: ubiF [C]

Synonym: gll2827

Alternate gene names: 37522396

Gene position: 3010334-3009060 (Counterclockwise)

Preceding gene: 37522397

Following gene: 37522395

Centisome position: 64.61

GC content: 65.65

Gene sequence:

>1275_bases
ATGGCATTCAACAACCGCAACACCCTGGCTGCAGAACGCGGCAAAGCCGCTTTGCAGGCGGACTGCATCATCATCGGCGG
CGGACCGGCGGGGGCCGTCCTCTCCCTGCTGTTGGCCCGCCAGGGGGTCTCGGTGATCCTCTTCGAAGCGCAAAAAGACT
TCGACCGCGATTTTCGGGGCGACTCGCTGCACGCCGTGGTCATGGAGTTGATGGACGATCTTCGATTGACCGAGCGCCTT
TTGGAGCACAAGCACAGCAAGCTCAAAACCCTCACCATGGTCAGCGCCGTGGGGGCGGCCCGGGTGGCTGATTTCAGCCG
CTTGCCGACCCACCACAACTACATGACCATGGTCGCCCAGAAGGACTTTTTGAACTTCATGGTCGCCGAGGCAAAGCGCT
ACGCGAATTTCCGAGTCTTCATGGCCACCAGCGTGCAGCGGCTCATCGAGGAGGAGGGCGAAATCCGCGGGGTAGTCTTC
AATGGCCCGGACGGACCGCAGGAGGCCCGCTGCGCCCTGACGGTCGGTGCGGACGGACGCTCCTCGCGCACCCGCCAGAT
GGCCGGCATCGATCTGGTCAAATTTTCCCAAGCCGTAGACGTGCTCTGGTTCCGCCTGCCGCGCTACCCCCACGAACCGG
AGGGGGTACTCTACCGGGTCGGTCAGGGGGCGGTCATGGGCCAGGCCGATCGCTCCGATGTCTGGCAAATCAGCTATATC
ATCCGCAAGGGCACCTACCAGAAACTGCGCGCCCAGGGCATCGAGGGGTTGCGCCGGTCGGTGACGACGCTGGTGCCGGA
ACTGGCCGACCGGGTGGGGCTGCTCAAGGACTGGTCACAGGCGTCGCTGCTGTCGGTCGAATCGGGTTATGTCCGCCGCT
GGTACCGCCCGGGGCTGTTGCTGATTGGCGATGCGGCCCACGTGATGTCGCCTTTCGGTGGGGTGGGCATCAGCTACGCA
ATCCAGGACGCGGTCGCTGCGGCCAATGTTCTGGCGGGGCCTTTGCGCAGCGGGCGCGTCGGGGTGGGCCACCTGGCCGC
CGTCCAGCGCCGCCGGGAACTGCCCACCCGCCTCAGCCAGTACTACCAGGCGATGATCCAGGACCAGCTGTTGGCCACAG
CCGCCAACGAAGGCATTCCGCCCAAACCGACCCTGCTGCGGCGGCTGCTGCGCCTGCCCGGGCTGCGGGAACTGCCGACG
CGGCTGCTCGCCTTCGGCCTGTGGCCCGCCCGCCTGCGCATCAAGAACAGTATTCCGCCCAATATCCATCGCTAG

Upstream 100 bases:

>100_bases
GGGCTCATCGACCTGCGGCTCGGCTCGCTCGCAGCCTTGCTGCCGCTCATCGACGATCGGCAGGCCGCGGCCTGAGACAG
AGATATTTGGGGGTTTTCTC

Downstream 100 bases:

>100_bases
GAGAGTGCCGACTATGCGTTGTCTTTTGATCCTCGGACTGACAACCTGTACCGCCTTCGGTCTGGGCAGCTTTGCCCCGC
AGGTCTCGCAGGCCAGACCC

Product: hypothetical protein

Products: 2-Octaprenyl-3-Methyl-5-Hydroxy-6-Methoxy-1,4- Benzoquinol [C]

Alternate protein names: None

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MAFNNRNTLAAERGKAALQADCIIIGGGPAGAVLSLLLARQGVSVILFEAQKDFDRDFRGDSLHAVVMELMDDLRLTERL
LEHKHSKLKTLTMVSAVGAARVADFSRLPTHHNYMTMVAQKDFLNFMVAEAKRYANFRVFMATSVQRLIEEEGEIRGVVF
NGPDGPQEARCALTVGADGRSSRTRQMAGIDLVKFSQAVDVLWFRLPRYPHEPEGVLYRVGQGAVMGQADRSDVWQISYI
IRKGTYQKLRAQGIEGLRRSVTTLVPELADRVGLLKDWSQASLLSVESGYVRRWYRPGLLLIGDAAHVMSPFGGVGISYA
IQDAVAAANVLAGPLRSGRVGVGHLAAVQRRRELPTRLSQYYQAMIQDQLLATAANEGIPPKPTLLRRLLRLPGLRELPT
RLLAFGLWPARLRIKNSIPPNIHR

Sequences:

>Translated_424_residues
MAFNNRNTLAAERGKAALQADCIIIGGGPAGAVLSLLLARQGVSVILFEAQKDFDRDFRGDSLHAVVMELMDDLRLTERL
LEHKHSKLKTLTMVSAVGAARVADFSRLPTHHNYMTMVAQKDFLNFMVAEAKRYANFRVFMATSVQRLIEEEGEIRGVVF
NGPDGPQEARCALTVGADGRSSRTRQMAGIDLVKFSQAVDVLWFRLPRYPHEPEGVLYRVGQGAVMGQADRSDVWQISYI
IRKGTYQKLRAQGIEGLRRSVTTLVPELADRVGLLKDWSQASLLSVESGYVRRWYRPGLLLIGDAAHVMSPFGGVGISYA
IQDAVAAANVLAGPLRSGRVGVGHLAAVQRRRELPTRLSQYYQAMIQDQLLATAANEGIPPKPTLLRRLLRLPGLRELPT
RLLAFGLWPARLRIKNSIPPNIHR
>Mature_423_residues
AFNNRNTLAAERGKAALQADCIIIGGGPAGAVLSLLLARQGVSVILFEAQKDFDRDFRGDSLHAVVMELMDDLRLTERLL
EHKHSKLKTLTMVSAVGAARVADFSRLPTHHNYMTMVAQKDFLNFMVAEAKRYANFRVFMATSVQRLIEEEGEIRGVVFN
GPDGPQEARCALTVGADGRSSRTRQMAGIDLVKFSQAVDVLWFRLPRYPHEPEGVLYRVGQGAVMGQADRSDVWQISYII
RKGTYQKLRAQGIEGLRRSVTTLVPELADRVGLLKDWSQASLLSVESGYVRRWYRPGLLLIGDAAHVMSPFGGVGISYAI
QDAVAAANVLAGPLRSGRVGVGHLAAVQRRRELPTRLSQYYQAMIQDQLLATAANEGIPPKPTLLRRLLRLPGLRELPTR
LLAFGLWPARLRIKNSIPPNIHR

Specific function: Oxygenase That Introduces The Hydroxyl Group At Carbon Five Of 2-Octaprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol Resulting In The Formation Of 2-Octaprenyl-3-Methyl-5-Hydroxy-6-Methoxy-1,4- Benzoquinol. [C]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.14.13.- [C]

Molecular weight: Translated: 46979; Mature: 46848

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFNNRNTLAAERGKAALQADCIIIGGGPAGAVLSLLLARQGVSVILFEAQKDFDRDFRG
CCCCCCCCHHHHCCCCEEEECEEEECCCCHHHHHHHHHHHCCCEEEEEECCHHHCCCCCC
DSLHAVVMELMDDLRLTERLLEHKHSKLKTLTMVSAVGAARVADFSRLPTHHNYMTMVAQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
KDFLNFMVAEAKRYANFRVFMATSVQRLIEEEGEIRGVVFNGPDGPQEARCALTVGADGR
HHHHHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEECCCCC
SSRTRQMAGIDLVKFSQAVDVLWFRLPRYPHEPEGVLYRVGQGAVMGQADRSDVWQISYI
CCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEECCCCCCCHHHHHHH
IRKGTYQKLRAQGIEGLRRSVTTLVPELADRVGLLKDWSQASLLSVESGYVRRWYRPGLL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECCCHHHHHHCCCCEE
LIGDAAHVMSPFGGVGISYAIQDAVAAANVLAGPLRSGRVGVGHLAAVQRRRELPTRLSQ
EEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
YYQAMIQDQLLATAANEGIPPKPTLLRRLLRLPGLRELPTRLLAFGLWPARLRIKNSIPP
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHEEECCCCCC
NIHR
CCCC
>Mature Secondary Structure 
AFNNRNTLAAERGKAALQADCIIIGGGPAGAVLSLLLARQGVSVILFEAQKDFDRDFRG
CCCCCCCHHHHCCCCEEEECEEEECCCCHHHHHHHHHHHCCCEEEEEECCHHHCCCCCC
DSLHAVVMELMDDLRLTERLLEHKHSKLKTLTMVSAVGAARVADFSRLPTHHNYMTMVAQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
KDFLNFMVAEAKRYANFRVFMATSVQRLIEEEGEIRGVVFNGPDGPQEARCALTVGADGR
HHHHHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEECCCCC
SSRTRQMAGIDLVKFSQAVDVLWFRLPRYPHEPEGVLYRVGQGAVMGQADRSDVWQISYI
CCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEECCCCCCCHHHHHHH
IRKGTYQKLRAQGIEGLRRSVTTLVPELADRVGLLKDWSQASLLSVESGYVRRWYRPGLL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECCCHHHHHHCCCCEE
LIGDAAHVMSPFGGVGISYAIQDAVAAANVLAGPLRSGRVGVGHLAAVQRRRELPTRLSQ
EEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
YYQAMIQDQLLATAANEGIPPKPTLLRRLLRLPGLRELPTRLLAFGLWPARLRIKNSIPP
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHEEECCCCCC
NIHR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: @OCTA02.txt*2-Octaprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol! [C]

Specific reaction: @OCTA02.txt*2-Octaprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol! = 2-Octaprenyl-3-Methyl-5-Hydroxy-6-Methoxy-1,4- Benzoquinol [C]

General reaction: Hydroxylation [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA