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The map label for this gene is ykoM [H]

Identifier: 37522330

GI number: 37522330

Start: 2940546

End: 2941001

Strand: Direct

Name: ykoM [H]

Synonym: glr2761

Alternate gene names: 37522330

Gene position: 2940546-2941001 (Clockwise)

Preceding gene: 37522328

Following gene: 37522332

Centisome position: 63.12

GC content: 59.21

Gene sequence:

>456_bases
ATGCCCCCCTCCTCCTCCAAGACGATTCGAGCGGCTCAGGAAAACTTCATGCCCACCCTGCGCGAATTGGCCGGAGCCTA
CCAGGCATTTTCGAACTATTCGGCCCGGCACGTGCGCTCGGTGGGCCTCACGCCGCCCCAGTTCGATGTGATCAGCACCC
TCGGCAACACCGACGGCATGAGCATGAACAAATTGGGAGAAAAGACGCTCATCACCAAGGGTACGCTCACGGGAATCATC
GACCGGCTCGAAGAAAAAGGACTGGTCAAGCGCGCCGTTACCGAGGGTAATCGCCGCAGCTTTACCGTCGCCCTCACCCC
CGAGGGCGAGCAACTGTTCGAGCAGATATTCCCGGCCCATGTCGCCCACCTCAAGGCGCGCTTTATGGGCCTGAGCGAAG
CGCAACTCGACCAACTGTTTGTCGCCCTTAAAATGCTGCGTACATTGTTCGAGTGA

Upstream 100 bases:

>100_bases
GCTGGTGTTCCCATAGTGCCTGTTTCGGTCGCTTTCTGCTAGAAAGTCCCCCATCCCGGTAGGATTGTTCCCAACAGAAC
GGGTAAGGAGAGTAGTCGCC

Downstream 100 bases:

>100_bases
TGTATCAGGTGTCAGCTGCCGGAAGGTCACAAACTTCCACAACGGCGTTGAGATTGAGCGGCCCGTAGAGGTGCGGAAAT
GTCTCGCCGCGGCCGTGGGC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MPPSSSKTIRAAQENFMPTLRELAGAYQAFSNYSARHVRSVGLTPPQFDVISTLGNTDGMSMNKLGEKTLITKGTLTGII
DRLEEKGLVKRAVTEGNRRSFTVALTPEGEQLFEQIFPAHVAHLKARFMGLSEAQLDQLFVALKMLRTLFE

Sequences:

>Translated_151_residues
MPPSSSKTIRAAQENFMPTLRELAGAYQAFSNYSARHVRSVGLTPPQFDVISTLGNTDGMSMNKLGEKTLITKGTLTGII
DRLEEKGLVKRAVTEGNRRSFTVALTPEGEQLFEQIFPAHVAHLKARFMGLSEAQLDQLFVALKMLRTLFE
>Mature_150_residues
PPSSSKTIRAAQENFMPTLRELAGAYQAFSNYSARHVRSVGLTPPQFDVISTLGNTDGMSMNKLGEKTLITKGTLTGIID
RLEEKGLVKRAVTEGNRRSFTVALTPEGEQLFEQIFPAHVAHLKARFMGLSEAQLDQLFVALKMLRTLFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16729; Mature: 16597

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPSSSKTIRAAQENFMPTLRELAGAYQAFSNYSARHVRSVGLTPPQFDVISTLGNTDGM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHCCCCCC
SMNKLGEKTLITKGTLTGIIDRLEEKGLVKRAVTEGNRRSFTVALTPEGEQLFEQIFPAH
CHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHH
VAHLKARFMGLSEAQLDQLFVALKMLRTLFE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PPSSSKTIRAAQENFMPTLRELAGAYQAFSNYSARHVRSVGLTPPQFDVISTLGNTDGM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHCCCCCC
SMNKLGEKTLITKGTLTGIIDRLEEKGLVKRAVTEGNRRSFTVALTPEGEQLFEQIFPAH
CHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHH
VAHLKARFMGLSEAQLDQLFVALKMLRTLFE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]