Click here to switch to the map view.

The map label for this gene is ysnF [H]

Identifier: 37522320

GI number: 37522320

Start: 2926701

End: 2927648

Strand: Direct

Name: ysnF [H]

Synonym: glr2751

Alternate gene names: 37522320

Gene position: 2926701-2927648 (Clockwise)

Preceding gene: 37522319

Following gene: 37522321

Centisome position: 62.82

GC content: 60.02

Gene sequence:

>948_bases
GTGCCCTCTTTTTTTGTGGCTTTGCCCACTGGATTGGTTGCATCCCTAAACATTTCGCCCACGACATTACGGAGTAAAAA
CATGCAAAGTGCCAATCTGCCCCCAACCGCCAACGCAACGGTTGCCGGCTTGTTCAACGACCGCCGCAGTGCGGATGTGG
CCGTTCGGGAGTTGCAGGCCGCCGGTTTTGCAGGCAATCAGATCGAGCAGTTTTTTGCGCCACAGGGCGCAAAAGCCAAC
GAAGGCGGCTTTTTTGATTCAATAGCCGGCTTTTTTGGGGACACTTCCGCACGCGGGAGTGTCCAGGCAGCGCCAAACGC
CTACGATCGCTTAGTAGCAATGGGCCTCGATGCGGACGACGCCCAAGAACTTCAAGACCGCATTGAAGGCGGCGGTGTGC
TCGTACTTCTGCGCGCCGGCAACAAGGCGATGGAGGCTCTTGAGGTTCTCAAGCGCAACGGTGCCTCCCCGGCCCAGTTG
GACCTGCAGGGCGACACCGCCCCCGTACCCGACGCGAAGCGTCAGGCCGTTGACACGACTACCGAGGCGCCTCAGCGCAT
TCAACTGCTCAAGGAAGTGCTGCGCGTCAACAAAGAGCGCGTGAAGAGCGGCGAAATCCGCCTGCGCAAGGAAGTCGTCT
CCGAAACGCAAACAGTCGAGGTGCCACTCATGCACGAGGAAGTCGTCATTGAGCGCCGCACGGTTACGGATGGGGAAGCG
GCCGTCGGCGAAATCGGCTCTGGTGAGACCATCCGGGTGCCCGTCAGCGAGGAGCGGGTCATCGTCGACAAGCGCGCCGT
GGTTTCTGAGGAAGTCACCGTCGGCAAGCGCGATGTCCAGGAAACCGAGCAGGTCACCGATACCGTCCGGCACGAAGAGC
TGCGCACGGACACCGAGGGTGAGGTAATTATGGACAGCGAAAAACGGCGTGTTCCCCCTGCCAAATAA

Upstream 100 bases:

>100_bases
CGATCGAGGTAAAGGGGTCGCTGCAAAGGCCATCCTAGGGAGGAGGTAAATAGCTGCACCTCAGTGCAAGACTGTTGTTC
AGGATGAACTTTTCCCCTTG

Downstream 100 bases:

>100_bases
CCCTATGCATCAAGACCGCGCCTCTTGGCGCGGTCTTGAACCGTAGACGCTGTAGGCAGCAGCAGGCACAGCGGAGGCCC
TTCGCCCGGCGACTCGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MPSFFVALPTGLVASLNISPTTLRSKNMQSANLPPTANATVAGLFNDRRSADVAVRELQAAGFAGNQIEQFFAPQGAKAN
EGGFFDSIAGFFGDTSARGSVQAAPNAYDRLVAMGLDADDAQELQDRIEGGGVLVLLRAGNKAMEALEVLKRNGASPAQL
DLQGDTAPVPDAKRQAVDTTTEAPQRIQLLKEVLRVNKERVKSGEIRLRKEVVSETQTVEVPLMHEEVVIERRTVTDGEA
AVGEIGSGETIRVPVSEERVIVDKRAVVSEEVTVGKRDVQETEQVTDTVRHEELRTDTEGEVIMDSEKRRVPPAK

Sequences:

>Translated_315_residues
MPSFFVALPTGLVASLNISPTTLRSKNMQSANLPPTANATVAGLFNDRRSADVAVRELQAAGFAGNQIEQFFAPQGAKAN
EGGFFDSIAGFFGDTSARGSVQAAPNAYDRLVAMGLDADDAQELQDRIEGGGVLVLLRAGNKAMEALEVLKRNGASPAQL
DLQGDTAPVPDAKRQAVDTTTEAPQRIQLLKEVLRVNKERVKSGEIRLRKEVVSETQTVEVPLMHEEVVIERRTVTDGEA
AVGEIGSGETIRVPVSEERVIVDKRAVVSEEVTVGKRDVQETEQVTDTVRHEELRTDTEGEVIMDSEKRRVPPAK
>Mature_314_residues
PSFFVALPTGLVASLNISPTTLRSKNMQSANLPPTANATVAGLFNDRRSADVAVRELQAAGFAGNQIEQFFAPQGAKANE
GGFFDSIAGFFGDTSARGSVQAAPNAYDRLVAMGLDADDAQELQDRIEGGGVLVLLRAGNKAMEALEVLKRNGASPAQLD
LQGDTAPVPDAKRQAVDTTTEAPQRIQLLKEVLRVNKERVKSGEIRLRKEVVSETQTVEVPLMHEEVVIERRTVTDGEAA
VGEIGSGETIRVPVSEERVIVDKRAVVSEEVTVGKRDVQETEQVTDTVRHEELRTDTEGEVIMDSEKRRVPPAK

Specific function: Unknown

COG id: COG3861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011756
- InterPro:   IPR019060 [H]

Pfam domain/function: PF09557 DUF2382 [H]

EC number: NA

Molecular weight: Translated: 34027; Mature: 33895

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSFFVALPTGLVASLNISPTTLRSKNMQSANLPPTANATVAGLFNDRRSADVAVRELQA
CCCEEEEECCCEEEEECCCCHHHCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHH
AGFAGNQIEQFFAPQGAKANEGGFFDSIAGFFGDTSARGSVQAAPNAYDRLVAMGLDADD
CCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEECCCCHHHHHEEECCCCCH
AQELQDRIEGGGVLVLLRAGNKAMEALEVLKRNGASPAQLDLQGDTAPVPDAKRQAVDTT
HHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHCCC
TEAPQRIQLLKEVLRVNKERVKSGEIRLRKEVVSETQTVEVPLMHEEVVIERRTVTDGEA
CCCHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHCCCCEEEECCCHHHHHEECCCCCCCCH
AVGEIGSGETIRVPVSEERVIVDKRAVVSEEVTVGKRDVQETEQVTDTVRHEELRTDTEG
HHCCCCCCCEEEEECCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC
EVIMDSEKRRVPPAK
CEEECCCCCCCCCCC
>Mature Secondary Structure 
PSFFVALPTGLVASLNISPTTLRSKNMQSANLPPTANATVAGLFNDRRSADVAVRELQA
CCEEEEECCCEEEEECCCCHHHCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHH
AGFAGNQIEQFFAPQGAKANEGGFFDSIAGFFGDTSARGSVQAAPNAYDRLVAMGLDADD
CCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEECCCCHHHHHEEECCCCCH
AQELQDRIEGGGVLVLLRAGNKAMEALEVLKRNGASPAQLDLQGDTAPVPDAKRQAVDTT
HHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHCCC
TEAPQRIQLLKEVLRVNKERVKSGEIRLRKEVVSETQTVEVPLMHEEVVIERRTVTDGEA
CCCHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHCCCCEEEECCCHHHHHEECCCCCCCCH
AVGEIGSGETIRVPVSEERVIVDKRAVVSEEVTVGKRDVQETEQVTDTVRHEELRTDTEG
HHCCCCCCCEEEEECCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC
EVIMDSEKRRVPPAK
CEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377; 10568751; 11988534 [H]