| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is yeaW [H]
Identifier: 37522269
GI number: 37522269
Start: 2859535
End: 2860602
Strand: Direct
Name: yeaW [H]
Synonym: glr2700
Alternate gene names: 37522269
Gene position: 2859535-2860602 (Clockwise)
Preceding gene: 37522266
Following gene: 37522271
Centisome position: 61.38
GC content: 62.17
Gene sequence:
>1068_bases ATGACTATTAGCCTCCCACTGACTTCCACCAGGCTGGGCTTGCCCGGGCGCTACTACACCGACCCCGACTTCTACCAGCG CGAGTTGAAAACCGTCTGGCGCTCCACCTGGCAGTGGGTCGGACGGCTTGAGGATTTGAGAAATTCCGGCGATTATCTGA CGACGATCCTGGGTGAGGAACCCATCTTCGTGGTCAAAAACGCCGAGGGCGAGCTTCTGGCGATGCACAACGTCTGCCCG CACCGGGGGGCGCGGCTGTTGCCTGAAAAGCAAGGCAGTTGCAAGTTCCTGCAATGCCCCTACCACGCCTGGACCTTCGA TCTCGAAGGCAAATTGCTGGCCGTCTCCCAACCCAAATGGTTTCCGGATCTCGACAAATCGTCCGTCCGGCTTGCCAGGG CGCGGGTGGCCAGTTGGGGCGGCTTCGTGTTCATCAATCCCGACCCTGAAGGTGAGTCCCTCGCCGAGTACCTGGCGGGC TATCCCGAGTACCTGGGCGGCTGGCCGCACCGCTGGGAGGAACTGCGGGAGGTGGCACGCACGGTCTACGAGGAACCGAT CAACTGGAAATTTATCGTCGAGAACTACGTCGAGGACTACCATTTCGCCACCGCCCACGCGGGGAGCCTGGTGCCTTTGT TCGATGTGCAGAATATCCGCACCACCCCCACCGGCCGCCACATCCCGATTCTGGTGCCCTATACGCCCGAGCCGCCCGCA GACCCGGCCTTCCTCAAGCATTGGGAAGCGGACGTGCCTTCCTATCAGGGCTTCATCTTTCCCAACATGATGATCAACAC CGGCAAGAACGGCTGCTCGGTGTGGCAGGTGACGGCTTTAGGACCGGAGCGCTCGCGCCTGGAGACGGTCACCTACCAGA CCCCCGCCCAGTACGCCGCCGACCCCTACGTTCCCGAATCCTGGCAGCAGGTGATGGAGGAAGACTTCTCCGTCTGCCGC CTGCTGCAACGGGGAATCGGCTCGCGGGCCTATCAGGTGCGCGCCCTGGCAGGTGAGCACGAACTGGGAGTCGCTCACTT CCACCAGGTGCTGGCCCAGTATCTCTAG
Upstream 100 bases:
>100_bases CAAGCCGCTCACCTGTCCAAGGCCAGGTAGTTAAAACTACTGCTTGAGAGTGTCCCGTCTGACACGATAAGCAAGAGTTT GTTTACTTTTGGCCATCCTG
Downstream 100 bases:
>100_bases GGCGCTCACTTCAGGGTGAGCGTCTCGGTACGGCCGCTACCGTCGATTTTGAGCACGCGGAAGTTGCCGGTGTCGGCGAT GTACAGATGGCCCCGCTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MTISLPLTSTRLGLPGRYYTDPDFYQRELKTVWRSTWQWVGRLEDLRNSGDYLTTILGEEPIFVVKNAEGELLAMHNVCP HRGARLLPEKQGSCKFLQCPYHAWTFDLEGKLLAVSQPKWFPDLDKSSVRLARARVASWGGFVFINPDPEGESLAEYLAG YPEYLGGWPHRWEELREVARTVYEEPINWKFIVENYVEDYHFATAHAGSLVPLFDVQNIRTTPTGRHIPILVPYTPEPPA DPAFLKHWEADVPSYQGFIFPNMMINTGKNGCSVWQVTALGPERSRLETVTYQTPAQYAADPYVPESWQQVMEEDFSVCR LLQRGIGSRAYQVRALAGEHELGVAHFHQVLAQYL
Sequences:
>Translated_355_residues MTISLPLTSTRLGLPGRYYTDPDFYQRELKTVWRSTWQWVGRLEDLRNSGDYLTTILGEEPIFVVKNAEGELLAMHNVCP HRGARLLPEKQGSCKFLQCPYHAWTFDLEGKLLAVSQPKWFPDLDKSSVRLARARVASWGGFVFINPDPEGESLAEYLAG YPEYLGGWPHRWEELREVARTVYEEPINWKFIVENYVEDYHFATAHAGSLVPLFDVQNIRTTPTGRHIPILVPYTPEPPA DPAFLKHWEADVPSYQGFIFPNMMINTGKNGCSVWQVTALGPERSRLETVTYQTPAQYAADPYVPESWQQVMEEDFSVCR LLQRGIGSRAYQVRALAGEHELGVAHFHQVLAQYL >Mature_354_residues TISLPLTSTRLGLPGRYYTDPDFYQRELKTVWRSTWQWVGRLEDLRNSGDYLTTILGEEPIFVVKNAEGELLAMHNVCPH RGARLLPEKQGSCKFLQCPYHAWTFDLEGKLLAVSQPKWFPDLDKSSVRLARARVASWGGFVFINPDPEGESLAEYLAGY PEYLGGWPHRWEELREVARTVYEEPINWKFIVENYVEDYHFATAHAGSLVPLFDVQNIRTTPTGRHIPILVPYTPEPPAD PAFLKHWEADVPSYQGFIFPNMMINTGKNGCSVWQVTALGPERSRLETVTYQTPAQYAADPYVPESWQQVMEEDFSVCRL LQRGIGSRAYQVRALAGEHELGVAHFHQVLAQYL
Specific function: Unknown
COG id: COG4638
COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
Organism=Escherichia coli, GI1788103, Length=352, Percent_Identity=30.3977272727273, Blast_Score=152, Evalue=4e-38, Organism=Escherichia coli, GI1788888, Length=203, Percent_Identity=33.4975369458128, Blast_Score=107, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017941 - InterPro: IPR015881 - InterPro: IPR001663 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: 1.14.1.- [C]
Molecular weight: Translated: 40605; Mature: 40474
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISLPLTSTRLGLPGRYYTDPDFYQRELKTVWRSTWQWVGRLEDLRNSGDYLTTILGEE CEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC PIFVVKNAEGELLAMHNVCPHRGARLLPEKQGSCKFLQCPYHAWTFDLEGKLLAVSQPKW CEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEECCCCC FPDLDKSSVRLARARVASWGGFVFINPDPEGESLAEYLAGYPEYLGGWPHRWEELREVAR CCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCHHHHCCCCHHHHHHHHHHH TVYEEPINWKFIVENYVEDYHFATAHAGSLVPLFDVQNIRTTPTGRHIPILVPYTPEPPA HHHHCCCCEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCC DPAFLKHWEADVPSYQGFIFPNMMINTGKNGCSVWQVTALGPERSRLETVTYQTPAQYAA CHHHHHHHCCCCCCCCCEECCCEEEECCCCCCEEEEEEECCCCCHHEEEEEEECCHHHCC DPYVPESWQQVMEEDFSVCRLLQRGIGSRAYQVRALAGEHELGVAHFHQVLAQYL CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHC >Mature Secondary Structure TISLPLTSTRLGLPGRYYTDPDFYQRELKTVWRSTWQWVGRLEDLRNSGDYLTTILGEE EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC PIFVVKNAEGELLAMHNVCPHRGARLLPEKQGSCKFLQCPYHAWTFDLEGKLLAVSQPKW CEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEECCCCC FPDLDKSSVRLARARVASWGGFVFINPDPEGESLAEYLAGYPEYLGGWPHRWEELREVAR CCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCHHHHCCCCHHHHHHHHHHH TVYEEPINWKFIVENYVEDYHFATAHAGSLVPLFDVQNIRTTPTGRHIPILVPYTPEPPA HHHHCCCCEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCC DPAFLKHWEADVPSYQGFIFPNMMINTGKNGCSVWQVTALGPERSRLETVTYQTPAQYAA CHHHHHHHCCCCCCCCCEECCCEEEECCCCCCEEEEEEECCCCCHHEEEEEEECCHHHCC DPYVPESWQQVMEEDFSVCRLLQRGIGSRAYQVRALAGEHELGVAHFHQVLAQYL CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]