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The map label for this gene is ydaM [H]

Identifier: 37522128

GI number: 37522128

Start: 2712481

End: 2713761

Strand: Direct

Name: ydaM [H]

Synonym: glr2559

Alternate gene names: 37522128

Gene position: 2712481-2713761 (Clockwise)

Preceding gene: 37522127

Following gene: 37522129

Centisome position: 58.22

GC content: 64.79

Gene sequence:

>1281_bases
GTGCCGGAGAATCCCCGCACACGGCAGGTGCAAACCGCGCTGGTCTGGTCTGCGCTGGTACTTTTTGTACTCGCTTTGCA
CCTGATCCCCACCGGGGCGTCGGTAGTGTGGCTTGCAGCAGGACTGACGGGTCTGTACGCTGTGCGGGTGCTCTTTGCCC
TCAGCCCACGGCCCAAGAGCGATCCTGCCTACCGGCCGCGGGTCTCGGTGCTGGTGGCGGCCAAAAACGAGCAGGCGGTC
GCCGCCCAACTGGTAGCCATGCTGCGCAGGCTCGACTATCCCGACTTTGAAGTCTGGATTGCCGATGACGGCAGCACCGA
CCGCACTTACCAGCGCCTCCTTGAAGCGGGCCGGGGCTGGCAGGCGCTGCATCTGGTGCGGCGCATCCCCGAGCGCAGCC
GACCCGGCAAATCCGCGGTGCTCAACGAGTTGCGCGAGCGCGCCACCGGCGACATTCTGGTGGTCTTCGACGCCGACGCC
CGGGTCGAGCCGGATTTTTTGAGCCGCACGGTGCCGCTGTTCGCCGTTTCAAGCGTCGGGGCCTTGCAGGTGCGCAAGCG
CGTCCACAATGCCGATTTTAACTTCTGGACCCGCGGCCAGTCGGCGGAGATGCTGCTCGATGCCTTTTACCAGCAGCAGC
GCGCCGCCATCGGCGGCACCGCCGAATTGCGCGGCAACGGCCAGCTTGTCCGCGCCGCCGCCCTGGAAGCGGTAGGCGGC
TGGAACGAAGCGACCGTCACCGACGATCTCGATCTCACCTTGCGGCTGCATCTGGGCGGCTGGCAGATCGCCTTTGCAAG
CGACCCGTGCGTCGATGAGGAAGGCGTGACCACCTGGTCGGCGCTCTGGCGGCAGCGATCCCGCTGGGCCGAAGGCGGCT
TCCAGCGCTACCTCGACTATGCCCCGCGGCTGTTCGGGGGGGCCATGGGCACGACCAAAACCGTCGACCAATTGATCTTT
TGCACGATCCAGTACCTGATGCCGGTGGCGGCAGTACTTGATCTGCTTTTTGCGTTCCAGCGCGGCGCTGCGCCGCTGCT
CACACCCTTGGTTCTGGTGGCGACTGTGTTTACTGTCTGCGGATTTTACTTCGGCCAGCGCGAGCGGGGAGTGCAAGTGG
GCAGAGCAATGCTCGAAACGCTGGCGGGCACGATCTACTTTCTGCACTGGTTTCCAGTCATCCTGGTGAAACTGGCCCGC
ACGGCGCTTGAACCCAAAAAACTCGTCTGGGTCAAGACCGCCCACCAGGGCGAATACGGGACGGCCGACTTCAAGCCGTA
G

Upstream 100 bases:

>100_bases
CGGACCAAGACGGCCGCTGGTCGGTGATCAATTTCGAACTGGTCAAAGAGCCGGGTCCGCCCCTCAAATACCCGTACTTT
CGTCTATTCGATTGAGAGCC

Downstream 100 bases:

>100_bases
AACTTGAAATTACCCTTAGACGTCAGTTCGGGATAAGGAAATACGGTCCGCCTAGGCTGGGATTACCACATCACAAGCCA
CGGACCGCTCGCTATGCCCA

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MPENPRTRQVQTALVWSALVLFVLALHLIPTGASVVWLAAGLTGLYAVRVLFALSPRPKSDPAYRPRVSVLVAAKNEQAV
AAQLVAMLRRLDYPDFEVWIADDGSTDRTYQRLLEAGRGWQALHLVRRIPERSRPGKSAVLNELRERATGDILVVFDADA
RVEPDFLSRTVPLFAVSSVGALQVRKRVHNADFNFWTRGQSAEMLLDAFYQQQRAAIGGTAELRGNGQLVRAAALEAVGG
WNEATVTDDLDLTLRLHLGGWQIAFASDPCVDEEGVTTWSALWRQRSRWAEGGFQRYLDYAPRLFGGAMGTTKTVDQLIF
CTIQYLMPVAAVLDLLFAFQRGAAPLLTPLVLVATVFTVCGFYFGQRERGVQVGRAMLETLAGTIYFLHWFPVILVKLAR
TALEPKKLVWVKTAHQGEYGTADFKP

Sequences:

>Translated_426_residues
MPENPRTRQVQTALVWSALVLFVLALHLIPTGASVVWLAAGLTGLYAVRVLFALSPRPKSDPAYRPRVSVLVAAKNEQAV
AAQLVAMLRRLDYPDFEVWIADDGSTDRTYQRLLEAGRGWQALHLVRRIPERSRPGKSAVLNELRERATGDILVVFDADA
RVEPDFLSRTVPLFAVSSVGALQVRKRVHNADFNFWTRGQSAEMLLDAFYQQQRAAIGGTAELRGNGQLVRAAALEAVGG
WNEATVTDDLDLTLRLHLGGWQIAFASDPCVDEEGVTTWSALWRQRSRWAEGGFQRYLDYAPRLFGGAMGTTKTVDQLIF
CTIQYLMPVAAVLDLLFAFQRGAAPLLTPLVLVATVFTVCGFYFGQRERGVQVGRAMLETLAGTIYFLHWFPVILVKLAR
TALEPKKLVWVKTAHQGEYGTADFKP
>Mature_425_residues
PENPRTRQVQTALVWSALVLFVLALHLIPTGASVVWLAAGLTGLYAVRVLFALSPRPKSDPAYRPRVSVLVAAKNEQAVA
AQLVAMLRRLDYPDFEVWIADDGSTDRTYQRLLEAGRGWQALHLVRRIPERSRPGKSAVLNELRERATGDILVVFDADAR
VEPDFLSRTVPLFAVSSVGALQVRKRVHNADFNFWTRGQSAEMLLDAFYQQQRAAIGGTAELRGNGQLVRAAALEAVGGW
NEATVTDDLDLTLRLHLGGWQIAFASDPCVDEEGVTTWSALWRQRSRWAEGGFQRYLDYAPRLFGGAMGTTKTVDQLIFC
TIQYLMPVAAVLDLLFAFQRGAAPLLTPLVLVATVFTVCGFYFGQRERGVQVGRAMLETLAGTIYFLHWFPVILVKLART
ALEPKKLVWVKTAHQGEYGTADFKP

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=376, Percent_Identity=25.531914893617, Blast_Score=93, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 47299; Mature: 47168

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPENPRTRQVQTALVWSALVLFVLALHLIPTGASVVWLAAGLTGLYAVRVLFALSPRPKS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
DPAYRPRVSVLVAAKNEQAVAAQLVAMLRRLDYPDFEVWIADDGSTDRTYQRLLEAGRGW
CCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCH
QALHLVRRIPERSRPGKSAVLNELRERATGDILVVFDADARVEPDFLSRTVPLFAVSSVG
HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCCHHHHHHCCH
ALQVRKRVHNADFNFWTRGQSAEMLLDAFYQQQRAAIGGTAELRGNGQLVRAAALEAVGG
HHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHCC
WNEATVTDDLDLTLRLHLGGWQIAFASDPCVDEEGVTTWSALWRQRSRWAEGGFQRYLDY
CCCCCCCCCCCEEEEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
APRLFGGAMGTTKTVDQLIFCTIQYLMPVAAVLDLLFAFQRGAAPLLTPLVLVATVFTVC
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
GFYFGQRERGVQVGRAMLETLAGTIYFLHWFPVILVKLARTALEPKKLVWVKTAHQGEYG
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
TADFKP
CCCCCC
>Mature Secondary Structure 
PENPRTRQVQTALVWSALVLFVLALHLIPTGASVVWLAAGLTGLYAVRVLFALSPRPKS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
DPAYRPRVSVLVAAKNEQAVAAQLVAMLRRLDYPDFEVWIADDGSTDRTYQRLLEAGRGW
CCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCH
QALHLVRRIPERSRPGKSAVLNELRERATGDILVVFDADARVEPDFLSRTVPLFAVSSVG
HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCCHHHHHHCCH
ALQVRKRVHNADFNFWTRGQSAEMLLDAFYQQQRAAIGGTAELRGNGQLVRAAALEAVGG
HHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHCC
WNEATVTDDLDLTLRLHLGGWQIAFASDPCVDEEGVTTWSALWRQRSRWAEGGFQRYLDY
CCCCCCCCCCCEEEEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
APRLFGGAMGTTKTVDQLIFCTIQYLMPVAAVLDLLFAFQRGAAPLLTPLVLVATVFTVC
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
GFYFGQRERGVQVGRAMLETLAGTIYFLHWFPVILVKLARTALEPKKLVWVKTAHQGEYG
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
TADFKP
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]