Definition Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession NC_005125
Length 4,659,019

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The map label for this gene is ssb [C]

Identifier: 37522057

GI number: 37522057

Start: 2646156

End: 2646623

Strand: Direct

Name: ssb [C]

Synonym: glr2488

Alternate gene names: 37522057

Gene position: 2646156-2646623 (Clockwise)

Preceding gene: 37522056

Following gene: 37522058

Centisome position: 56.8

GC content: 69.23

Gene sequence:

>468_bases
ATGAATACGATTGCGCTTCTGGGCACGCTGCACTCCGCCCCGCAACTGCGCCACACCCAGGATGGCCTGGCCCAGGCCTC
GGTGGTGCTGAGTTTTACGACCCTCAAAGCCGACGAAGCCGACTACACCGTCCGGGTCGTCCTCTTCGCCACCGCCGCCG
AGGAGTTCCACACCAATTTCCACCAGGGGGACGCGGTGATCGTCGAGGGCCGCCTGCACAGCGAATCGCGCGCCCGCGAG
GACGGCACCAAGGAGCGCCACGTCGAGGTGATCGCCCGGCGCGTCCACGCTGTGGCCATTCCCGCTGCCCCAGCCACTCC
GGCTCCAGCCTCAGTCCCGCCCGCAACAACCAAACAGCACCCCCCAGCCGCCGAACGCAAAACCGCCGCCCCGACGGCCC
GCCGTCCTGCGCCTTCGGCTCGGCCCCCCGTAGCCGCCGCCGTCGCCGACGACGACATCCCTTTCTAA

Upstream 100 bases:

>100_bases
AGCGCGTGAGCGGCCCGTGATCAAAGTCGACCAGCTCGAACTGCTCGGTCGCGCCGCTCGTCCGGACGAACCTGAATCTT
TCTAATCACGAGGCCATCCT

Downstream 100 bases:

>100_bases
AACCTGCCAACCCAGCCCTTCGACCTGCCGGAGCAAGCTCTATCCCCCGATAACTTGCTCCATTTCTTGTCAAAAGACTT
GAGTCGCTACGCATAAATCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MNTIALLGTLHSAPQLRHTQDGLAQASVVLSFTTLKADEADYTVRVVLFATAAEEFHTNFHQGDAVIVEGRLHSESRARE
DGTKERHVEVIARRVHAVAIPAAPATPAPASVPPATTKQHPPAAERKTAAPTARRPAPSARPPVAAAVADDDIPF

Sequences:

>Translated_155_residues
MNTIALLGTLHSAPQLRHTQDGLAQASVVLSFTTLKADEADYTVRVVLFATAAEEFHTNFHQGDAVIVEGRLHSESRARE
DGTKERHVEVIARRVHAVAIPAAPATPAPASVPPATTKQHPPAAERKTAAPTARRPAPSARPPVAAAVADDDIPF
>Mature_155_residues
MNTIALLGTLHSAPQLRHTQDGLAQASVVLSFTTLKADEADYTVRVVLFATAAEEFHTNFHQGDAVIVEGRLHSESRARE
DGTKERHVEVIARRVHAVAIPAAPATPAPASVPPATTKQHPPAAERKTAAPTARRPAPSARPPVAAAVADDDIPF

Specific function: This Protein Is Essential For Replication Of The Chromosomes And Its Single-Stranded DNA Phages. It Is Also Involved In DNA Recombination And Repair. [C]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16427; Mature: 16427

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTIALLGTLHSAPQLRHTQDGLAQASVVLSFTTLKADEADYTVRVVLFATAAEEFHTNF
CCCEEEEECCCCCCCCCCCHHHHHHHHHEEEEEEECCCCCCCEEEEEEEEHHHHHHHCCC
HQGDAVIVEGRLHSESRAREDGTKERHVEVIARRVHAVAIPAAPATPAPASVPPATTKQH
CCCCEEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCC
PPAAERKTAAPTARRPAPSARPPVAAAVADDDIPF
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MNTIALLGTLHSAPQLRHTQDGLAQASVVLSFTTLKADEADYTVRVVLFATAAEEFHTNF
CCCEEEEECCCCCCCCCCCHHHHHHHHHEEEEEEECCCCCCCEEEEEEEEHHHHHHHCCC
HQGDAVIVEGRLHSESRAREDGTKERHVEVIARRVHAVAIPAAPATPAPASVPPATTKQH
CCCCEEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCC
PPAAERKTAAPTARRPAPSARPPVAAAVADDDIPF
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA