| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is yliI [C]
Identifier: 37522012
GI number: 37522012
Start: 2598770
End: 2599873
Strand: Direct
Name: yliI [C]
Synonym: glr2443
Alternate gene names: 37522012
Gene position: 2598770-2599873 (Clockwise)
Preceding gene: 37522011
Following gene: 37522015
Centisome position: 55.78
GC content: 64.4
Gene sequence:
>1104_bases ATGCGCGCATCGAAACTGGCGGCACTGTTGCTCGTTTTTTTCCCCTGGTACCCAGCCCAGGCGGCGCCGAATCTCGATCG CATCGGCCTGCCGCCCGGATTTGCAATCGGTATTTTTGCCCAGGGGCTGGACAGGCCCCGCGCCGTCGCCTTTGCTCCCA ACGGCGATTTGTTTGTCACCGAGATCGGGGCGGGGCGCGTGAGTGTGCTGCCCGATCGCGACGGCAACGGCAAAGCTGAC CGCCGAGTGACCTTCGCAGGCAAGTTGAGTGATCCCCACGGCCTCGCTTTCTACAGGGGCTATCTCTACGTCGGTGAGAC CGGTAAAGTCGCCCGCTACCCCTACAAAAGCGGGCAGCTCGAAGGCCGCAACCGGCAGGTGGTGGTGAATAACCTGCCTT CCGGCGGGGGCCACTTTACCCGCACGGTCGCCTTCGGTCCGGACGATAAAATGTACGTATCGATCGGTTCGACCTGCAAC GTCTGTGTCGAGCGCGACAAGCGGCGCGCCACGGTCATGCAGTTCAATGCCGACGGCACCGGCGGTCGCATCTACGCAAG CGGCCTGCGCAACGCGGTCGGTTTGCGCTTCGACTCGGCAGGCAGGCTGTGGGCCACCAGCAACGGCCGCGACTGGCTGG GGGACGACACGCCGCCGGACGAGCTGCACATTCTCGAAGACGGCATGAGCGCCGGCTGGCCCTTTTGCCACGCGGGCAAG TACAAAGATCCCGAGCCCAAATATGCAGCACTGGGTTCCTGTGAGCAAGTGAAGCGGCCGCTCTGGGGGTTTCAGGCCCA CTCGGCGCCTCTGGGGGTTAGTGAATACACCGGCAATCAGTTTCCGCCCGAGTACCGGGGCGATTTGTTCGTGGCCTTCC ACGGCAGCTGGAACCGCTCGCGCCCGACCGGCTATAAAGTGGTGCGCGCCGAGATCGAGAACGGCAAGGTCACCCGGTTG AGCGATTTTGCCACCGGCTGGCTGCGCCCCGATCGCGAGGTGGCCGGTCGTCCCGTCGATGTGCTGGCCGGGCCGGACGG CAGTCTGTTTGTCACCGACGACGGCGAAGGGGTGATCTACCGCATCCGCTATACGGGGCAGTAG
Upstream 100 bases:
>100_bases CGGCCTGCGGGCCATCGCTCTGTTCCTGCGTCGGCGGGCCGAGCAGGACGAGGGTCCCTGTCGATAGACTGGAAAGGCAA CCCTTTTGGCGAATCGCTCC
Downstream 100 bases:
>100_bases GGCGAACCGAGCTCGGGGCGAGCGTGGTTGGTCAAATCACTGTCGTCAATACGGGAACCGTTGGCGCTGCCCTAGCCGAG GTCGGGCATCAGGTTGAGCA
Product: L-sorbosone dehydrogenase
Products: NA
Alternate protein names: SNDH [H]
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MRASKLAALLLVFFPWYPAQAAPNLDRIGLPPGFAIGIFAQGLDRPRAVAFAPNGDLFVTEIGAGRVSVLPDRDGNGKAD RRVTFAGKLSDPHGLAFYRGYLYVGETGKVARYPYKSGQLEGRNRQVVVNNLPSGGGHFTRTVAFGPDDKMYVSIGSTCN VCVERDKRRATVMQFNADGTGGRIYASGLRNAVGLRFDSAGRLWATSNGRDWLGDDTPPDELHILEDGMSAGWPFCHAGK YKDPEPKYAALGSCEQVKRPLWGFQAHSAPLGVSEYTGNQFPPEYRGDLFVAFHGSWNRSRPTGYKVVRAEIENGKVTRL SDFATGWLRPDREVAGRPVDVLAGPDGSLFVTDDGEGVIYRIRYTGQ
Sequences:
>Translated_367_residues MRASKLAALLLVFFPWYPAQAAPNLDRIGLPPGFAIGIFAQGLDRPRAVAFAPNGDLFVTEIGAGRVSVLPDRDGNGKAD RRVTFAGKLSDPHGLAFYRGYLYVGETGKVARYPYKSGQLEGRNRQVVVNNLPSGGGHFTRTVAFGPDDKMYVSIGSTCN VCVERDKRRATVMQFNADGTGGRIYASGLRNAVGLRFDSAGRLWATSNGRDWLGDDTPPDELHILEDGMSAGWPFCHAGK YKDPEPKYAALGSCEQVKRPLWGFQAHSAPLGVSEYTGNQFPPEYRGDLFVAFHGSWNRSRPTGYKVVRAEIENGKVTRL SDFATGWLRPDREVAGRPVDVLAGPDGSLFVTDDGEGVIYRIRYTGQ >Mature_367_residues MRASKLAALLLVFFPWYPAQAAPNLDRIGLPPGFAIGIFAQGLDRPRAVAFAPNGDLFVTEIGAGRVSVLPDRDGNGKAD RRVTFAGKLSDPHGLAFYRGYLYVGETGKVARYPYKSGQLEGRNRQVVVNNLPSGGGHFTRTVAFGPDDKMYVSIGSTCN VCVERDKRRATVMQFNADGTGGRIYASGLRNAVGLRFDSAGRLWATSNGRDWLGDDTPPDELHILEDGMSAGWPFCHAGK YKDPEPKYAALGSCEQVKRPLWGFQAHSAPLGVSEYTGNQFPPEYRGDLFVAFHGSWNRSRPTGYKVVRAEIENGKVTRL SDFATGWLRPDREVAGRPVDVLAGPDGSLFVTDDGEGVIYRIRYTGQ
Specific function: Converts L-sorbosone into 2-keto-L-gulonic acid (2KGA) [H]
COG id: COG2133
COG function: function code G; Glucose/sorbosone dehydrogenases
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To B.burgdorferi BB024 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR012938 - InterPro: IPR011041 [H]
Pfam domain/function: PF07995 GSDH [H]
EC number: NA
Molecular weight: Translated: 40099; Mature: 40099
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRASKLAALLLVFFPWYPAQAAPNLDRIGLPPGFAIGIFAQGLDRPRAVAFAPNGDLFVT CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHCCCCCCEEEECCCCCEEEE EIGAGRVSVLPDRDGNGKADRRVTFAGKLSDPHGLAFYRGYLYVGETGKVARYPYKSGQL EECCCEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEEECCCCCEEECCCCCCCC EGRNRQVVVNNLPSGGGHFTRTVAFGPDDKMYVSIGSTCNVCVERDKRRATVMQFNADGT CCCCCEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCEEEEECCCCCCEEEEEEECCCC GGRIYASGLRNAVGLRFDSAGRLWATSNGRDWLGDDTPPDELHILEDGMSAGWPFCHAGK CCEEEECCCCHHHCEEECCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC YKDPEPKYAALGSCEQVKRPLWGFQAHSAPLGVSEYTGNQFPPEYRGDLFVAFHGSWNRS CCCCCCCCHHCCCHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEEECCCCCC RPTGYKVVRAEIENGKVTRLSDFATGWLRPDREVAGRPVDVLAGPDGSLFVTDDGEGVIY CCCCEEEEEEEECCCCEEEEHHHHHCCCCCCHHHCCCCEEEEECCCCCEEEEECCCCEEE RIRYTGQ EEEECCC >Mature Secondary Structure MRASKLAALLLVFFPWYPAQAAPNLDRIGLPPGFAIGIFAQGLDRPRAVAFAPNGDLFVT CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHCCCCCCEEEECCCCCEEEE EIGAGRVSVLPDRDGNGKADRRVTFAGKLSDPHGLAFYRGYLYVGETGKVARYPYKSGQL EECCCEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEEECCCCCEEECCCCCCCC EGRNRQVVVNNLPSGGGHFTRTVAFGPDDKMYVSIGSTCNVCVERDKRRATVMQFNADGT CCCCCEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCEEEEECCCCCCEEEEEEECCCC GGRIYASGLRNAVGLRFDSAGRLWATSNGRDWLGDDTPPDELHILEDGMSAGWPFCHAGK CCEEEECCCCHHHCEEECCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC YKDPEPKYAALGSCEQVKRPLWGFQAHSAPLGVSEYTGNQFPPEYRGDLFVAFHGSWNRS CCCCCCCCHHCCCHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEEECCCCCC RPTGYKVVRAEIENGKVTRLSDFATGWLRPDREVAGRPVDVLAGPDGSLFVTDDGEGVIY CCCCEEEEEEEECCCCEEEEHHHHHCCCCCCHHHCCCCEEEEECCCCCEEEEECCCCEEE RIRYTGQ EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7574579 [H]