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The map label for this gene is dnaJ [H]

Identifier: 37521966

GI number: 37521966

Start: 2557915

End: 2558601

Strand: Direct

Name: dnaJ [H]

Synonym: glr2397

Alternate gene names: 37521966

Gene position: 2557915-2558601 (Clockwise)

Preceding gene: 37521965

Following gene: 37521967

Centisome position: 54.9

GC content: 64.77

Gene sequence:

>687_bases
GTGAGCACACCGACCCACTATCAGACTCTTGGCATCGAGCCGTCGGCGACGACGGAGGAGATTCGTGCGGCTTACCGGCG
GCTGGCCAAGCAGCACCATCCCGACACCGGTGCCCTCGCCGGTCACCAGCGGATGGTGATACTTAACGAAGCTTACGAGG
TCTTGAGCGAGCCGCAGCGGCGCCAGTCCTACGATCGGCTATTGGCCCATGGCGATGAGCGCCCCAGCCGGGTTGCCACC
CAGACGGTCCCGCGCGCCCCCTTCGGGCGGGGCGCCAGCGAGGATAGCGAGCGCCAGCGCTGGCTGAGAGACATCTACCG
GCCGGTCAACGCCGCCATTTACCGGGTGATCCGCCCTTTCCGGCGGCAGCTCGATGAGCTTGCCTACGACCCCTACGACG
ACGAACTGATCGCCGAATTTGTGGCTTATCTGGAGCGCTCGCAGGTCATTTATCAGCAGGCGAAGGCGCTGTTTGCTTCG
CGGCCCAACCCGGCGGGAGCGGCGCTGGTGGCCGAACTGCTCTACCACAGCCTCAACCAGCTGGGTGATGCCCTCGACGA
ATTGCGCTACTTCACGCTCAATTACGACTACCAGCATCTACACGTCGGCCAGGAACTGGTGGGGATCGTCACCGACCTGC
GCCGCCAGGCGACCGAAGCGGCTGAGCGCCTGCTGCAGATGGGATAG

Upstream 100 bases:

>100_bases
ACCCATGCACGGCGCTTCTCGTCCTCTCGTAGCCGAATAGTTGTCCAAAACGCCCGATAGAGGCGATGATCCCGTGCGCA
GGCGGCCCTAAACTGGTGAA

Downstream 100 bases:

>100_bases
TGCCCTATGTTTGAAATCGACACACAGACACTGCAAACCCTCCTGGGCGCCGAGGCGGAAGGAACGCTTCCGATGTCGGT
GCGGGGCGTCGGGACCGACA

Product: heat shock protein DnaJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSTPTHYQTLGIEPSATTEEIRAAYRRLAKQHHPDTGALAGHQRMVILNEAYEVLSEPQRRQSYDRLLAHGDERPSRVAT
QTVPRAPFGRGASEDSERQRWLRDIYRPVNAAIYRVIRPFRRQLDELAYDPYDDELIAEFVAYLERSQVIYQQAKALFAS
RPNPAGAALVAELLYHSLNQLGDALDELRYFTLNYDYQHLHVGQELVGIVTDLRRQATEAAERLLQMG

Sequences:

>Translated_228_residues
MSTPTHYQTLGIEPSATTEEIRAAYRRLAKQHHPDTGALAGHQRMVILNEAYEVLSEPQRRQSYDRLLAHGDERPSRVAT
QTVPRAPFGRGASEDSERQRWLRDIYRPVNAAIYRVIRPFRRQLDELAYDPYDDELIAEFVAYLERSQVIYQQAKALFAS
RPNPAGAALVAELLYHSLNQLGDALDELRYFTLNYDYQHLHVGQELVGIVTDLRRQATEAAERLLQMG
>Mature_227_residues
STPTHYQTLGIEPSATTEEIRAAYRRLAKQHHPDTGALAGHQRMVILNEAYEVLSEPQRRQSYDRLLAHGDERPSRVATQ
TVPRAPFGRGASEDSERQRWLRDIYRPVNAAIYRVIRPFRRQLDELAYDPYDDELIAEFVAYLERSQVIYQQAKALFASR
PNPAGAALVAELLYHSLNQLGDALDELRYFTLNYDYQHLHVGQELVGIVTDLRRQATEAAERLLQMG

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323870, Length=66, Percent_Identity=42.4242424242424, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 26163; Mature: 26032

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPTHYQTLGIEPSATTEEIRAAYRRLAKQHHPDTGALAGHQRMVILNEAYEVLSEPQR
CCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHH
RQSYDRLLAHGDERPSRVATQTVPRAPFGRGASEDSERQRWLRDIYRPVNAAIYRVIRPF
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RRQLDELAYDPYDDELIAEFVAYLERSQVIYQQAKALFASRPNPAGAALVAELLYHSLNQ
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LGDALDELRYFTLNYDYQHLHVGQELVGIVTDLRRQATEAAERLLQMG
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STPTHYQTLGIEPSATTEEIRAAYRRLAKQHHPDTGALAGHQRMVILNEAYEVLSEPQR
CCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHH
RQSYDRLLAHGDERPSRVATQTVPRAPFGRGASEDSERQRWLRDIYRPVNAAIYRVIRPF
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RRQLDELAYDPYDDELIAEFVAYLERSQVIYQQAKALFASRPNPAGAALVAELLYHSLNQ
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LGDALDELRYFTLNYDYQHLHVGQELVGIVTDLRRQATEAAERLLQMG
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA