Definition Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession NC_005125
Length 4,659,019

Click here to switch to the map view.

The map label for this gene is 37521940

Identifier: 37521940

GI number: 37521940

Start: 2531485

End: 2531856

Strand: Direct

Name: 37521940

Synonym: glr2371

Alternate gene names: NA

Gene position: 2531485-2531856 (Clockwise)

Preceding gene: 37521937

Following gene: 37521941

Centisome position: 54.34

GC content: 60.22

Gene sequence:

>372_bases
ATGTCGGGACAGTCTGTTACAATCCGTGAAGTTTTAACCGCTCGTACTCGTGAGGAGGTTCTGGTCGTGTCCAGAAGCGC
CATCCCGGCAGACCGGCGCGGTCGCCAGCTGCTCAAACAGATTCCCCAGTTTCGCATTTGCTGCTCTGAGGACAAGCCGG
TCACCGCCGCCCGCCGATTCGTTCAAGAAAACAACATCGTGCCGCCGGCGGTGATCGCGGTGCAGCGCAACCAGCAGGCG
GCCGAGCGCTTTTTCTGGTCGACGCGGGGACTATTTGGGGCGCGCTACGCCGAGGAGCACTATTTTCTATTTCCGTCGCT
GGTGGCGATCGTGCACCAGCAGGCCAATGTGGGCGAGCAAAAAGTCGGCTGA

Upstream 100 bases:

>100_bases
AGGCCGTTGCTGGGTTTCACTCTACACTACAACCGCAAATGCCCAAGAAAATGCGGCTCATTGCAACGTTATATGAAGAG
CGGGGGATGCCCGGATTGAC

Downstream 100 bases:

>100_bases
CCAACCGAGGCTATGCTTGAAGTAGAGCCCCACCCGTAAAGAGACATTGCCATGTCGATGCTTGAGACCCGCGCGGAGCG
CATGGTCATCAATCTCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MSGQSVTIREVLTARTREEVLVVSRSAIPADRRGRQLLKQIPQFRICCSEDKPVTAARRFVQENNIVPPAVIAVQRNQQA
AERFFWSTRGLFGARYAEEHYFLFPSLVAIVHQQANVGEQKVG

Sequences:

>Translated_123_residues
MSGQSVTIREVLTARTREEVLVVSRSAIPADRRGRQLLKQIPQFRICCSEDKPVTAARRFVQENNIVPPAVIAVQRNQQA
AERFFWSTRGLFGARYAEEHYFLFPSLVAIVHQQANVGEQKVG
>Mature_122_residues
SGQSVTIREVLTARTREEVLVVSRSAIPADRRGRQLLKQIPQFRICCSEDKPVTAARRFVQENNIVPPAVIAVQRNQQAA
ERFFWSTRGLFGARYAEEHYFLFPSLVAIVHQQANVGEQKVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13938; Mature: 13807

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGQSVTIREVLTARTREEVLVVSRSAIPADRRGRQLLKQIPQFRICCSEDKPVTAARRF
CCCCCCHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHCCHHEEECCCCCCHHHHHHH
VQENNIVPPAVIAVQRNQQAAERFFWSTRGLFGARYAEEHYFLFPSLVAIVHQQANVGEQ
HHHCCCCCCHHEEEECCHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCCC
KVG
CCC
>Mature Secondary Structure 
SGQSVTIREVLTARTREEVLVVSRSAIPADRRGRQLLKQIPQFRICCSEDKPVTAARRF
CCCCCHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHCCHHEEECCCCCCHHHHHHH
VQENNIVPPAVIAVQRNQQAAERFFWSTRGLFGARYAEEHYFLFPSLVAIVHQQANVGEQ
HHHCCCCCCHHEEEECCHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCCC
KVG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA