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The map label for this gene is petE [H]

Identifier: 37521910

GI number: 37521910

Start: 2501811

End: 2502200

Strand: Reverse

Name: petE [H]

Synonym: gvip322

Alternate gene names: 37521910

Gene position: 2502200-2501811 (Counterclockwise)

Preceding gene: 37521911

Following gene: 37521909

Centisome position: 53.71

GC content: 59.49

Gene sequence:

>390_bases
ATGATCTCATGGTCTAAATTTGCAGCTTGCTCGCTGGCTGCCCTGGTGGCGGTCTGCGCCACTGGCCTGGCTGCCGGTGC
CAAAGAAATCGAAGTCAAGATGGGTGCCGACACCGGCCGGCTTGTCTACGTCCCTGCCAAGATCGACGCGGCACCCGGCG
ATACGATCAAATGGACGATGAACAAGGCCGGCCCCCATAATGCCGTCTTCGATGCCGCCAAGTCGGCCGACCCGGCCGGG
GCGAAGGCGATGAGCCAGAGCAAGCTGCTCAACAAACCCAAAGATTCCTACATTTCGACCATTCCGGCCAACGCCAAGAA
GGGAGACTACGCCTTCTACTGCACCCCCCACAAGAGCACCGGCATGGTCGGCACGCTGACTATCAAATAA

Upstream 100 bases:

>100_bases
GAGGCCGGGTCGGCAGAAGCCATCACCGCCGCTTCCGAAGAGCCGGACACGCCCGTTAGTCACCAAGACGCCCACGCATA
ATGCATGGAGAACCTCCGAA

Downstream 100 bases:

>100_bases
GTGTCCGCATAGCGGTCTTTATTTCACCCACCGGCCTGCGGGCCGGTTTTTTGATCGAGGGTGTTATTCTTTGACAGGAC
AATCCTCTCTAGCCAGCGCC

Product: plastocyanin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MISWSKFAACSLAALVAVCATGLAAGAKEIEVKMGADTGRLVYVPAKIDAAPGDTIKWTMNKAGPHNAVFDAAKSADPAG
AKAMSQSKLLNKPKDSYISTIPANAKKGDYAFYCTPHKSTGMVGTLTIK

Sequences:

>Translated_129_residues
MISWSKFAACSLAALVAVCATGLAAGAKEIEVKMGADTGRLVYVPAKIDAAPGDTIKWTMNKAGPHNAVFDAAKSADPAG
AKAMSQSKLLNKPKDSYISTIPANAKKGDYAFYCTPHKSTGMVGTLTIK
>Mature_129_residues
MISWSKFAACSLAALVAVCATGLAAGAKEIEVKMGADTGRLVYVPAKIDAAPGDTIKWTMNKAGPHNAVFDAAKSADPAG
AKAMSQSKLLNKPKDSYISTIPANAKKGDYAFYCTPHKSTGMVGTLTIK

Specific function: Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I [H]

COG id: COG3794

COG function: function code C; Plastocyanin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 plastocyanin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000923
- InterPro:   IPR001235
- InterPro:   IPR008972
- InterPro:   IPR002387 [H]

Pfam domain/function: PF00127 Copper-bind [H]

EC number: NA

Molecular weight: Translated: 13380; Mature: 13380

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS00196 COPPER_BLUE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISWSKFAACSLAALVAVCATGLAAGAKEIEVKMGADTGRLVYVPAKIDAAPGDTIKWTM
CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECEECCCCCCEEEEEE
NKAGPHNAVFDAAKSADPAGAKAMSQSKLLNKPKDSYISTIPANAKKGDYAFYCTPHKST
CCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEECCCCCC
GMVGTLTIK
CEEEEEEEC
>Mature Secondary Structure
MISWSKFAACSLAALVAVCATGLAAGAKEIEVKMGADTGRLVYVPAKIDAAPGDTIKWTM
CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECEECCCCCCEEEEEE
NKAGPHNAVFDAAKSADPAGAKAMSQSKLLNKPKDSYISTIPANAKKGDYAFYCTPHKST
CCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEECCCCCC
GMVGTLTIK
CEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA