| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
Click here to switch to the map view.
The map label for this gene is 37521851
Identifier: 37521851
GI number: 37521851
Start: 2443972
End: 2445027
Strand: Reverse
Name: 37521851
Synonym: gll2282
Alternate gene names: NA
Gene position: 2445027-2443972 (Counterclockwise)
Preceding gene: 37521853
Following gene: 37521840
Centisome position: 52.48
GC content: 59.85
Gene sequence:
>1056_bases ATGGTACCTATCATTGCCGATGACAAACGCCTGGCGATTGCCGTCAAACTGGCCGACATCAAGGCCCTTCAGGAGTTGCT GATCACCATCGAGCAGCGCCTGGTCACCCTGTCCGACGACCCGGACATCCGCAAGCGGCTGGGGGACATGCTCGCAGACG ATCAGAAAAATCTCACCATCATCGAGAACACGATCATCCAGTACGGCGTCAAGGGCGAACCGCGCGACACCGTCGTCGAG ATGACCGACAAGCTGAACGACCTGATGCAAAGCAGCAAGCTGAGCCTCTACGACAAGTTCAGCCAACTCGAACTGCTCAA GCACCAGGCGGCGATGGCCGGCATCCTGGTCCACAAGGCGGCCCAGCTGGTCGGTGCCGACATCGATGCGGCCATCGCCC CGCTCAATACGGTCAACTTCGAGAACCGCGCCCACCAAGAGCAGCTCAAGGGCATCCTGGAGGTGCTCGGCACGCGCGAG CTGACCGGCAAAGAGGCCGACCAGGGTCTGTGGGCACGGGTGCAAGATTCGCTGGCGGCCCTTTCCGGCGTCTTCGGCTC GGTCATCTCCCACGGCGAGGGCGGTGCGGACATGAAAGTGACCGACATCGTGCGCATGGACCACCAGAAGGTCAATATGC TGTTCGGCCAGATCCAGGGCACGAACGACCCGGCCAAGAAGTTGGAATTTTTTAACCAGCTCTACGGCGATCTAAGCGCC CACGCCGAGGCCGAAGACCAGACCTGGTACGCCGACCTCAAGCGCTTCGACGACAGCATCGAGAAAGCCGAGTTCGCCTA CAAAGATCAAGACGAACTGGTGGCCCTTCTCGAACAAGTTAAAACCAGCGGCATCGATTCTGCCGAATTTGACTCGCGCC TGGCCCAGTTGCAGCAGAAGGTGACCAGCCACGTCAACTACGAGGAGGCCGAGCTTTTTGCCAAGCTGCGCCAGCACTTC AGCGATGAGCAGCTGCGCGAGATGGGCAAACAGTTCCAGATGGCCAAAAGCCGTTACCAGGACATCCGGCAGCAGCAGAT GACCGGCCGTTCGTAA
Upstream 100 bases:
>100_bases CGGAGTACGAACCGCCAGCATTTCGTCCTCGCGGCACTCCCGGGTCCGCGGCCGAGCGGCGACGATCGTTCCGTATAGGA CGAGACGAGAGGACACCCGC
Downstream 100 bases:
>100_bases AACGTTCGAAACATTGAACGATAGGGGAGGCAGACGGCCTCCCCTTTTTTATTCTTGCGAACTGACCTCGCGCTCGGAGC GCAGTTGCTCGACCAGGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Alr3199 protein [H]
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MVPIIADDKRLAIAVKLADIKALQELLITIEQRLVTLSDDPDIRKRLGDMLADDQKNLTIIENTIIQYGVKGEPRDTVVE MTDKLNDLMQSSKLSLYDKFSQLELLKHQAAMAGILVHKAAQLVGADIDAAIAPLNTVNFENRAHQEQLKGILEVLGTRE LTGKEADQGLWARVQDSLAALSGVFGSVISHGEGGADMKVTDIVRMDHQKVNMLFGQIQGTNDPAKKLEFFNQLYGDLSA HAEAEDQTWYADLKRFDDSIEKAEFAYKDQDELVALLEQVKTSGIDSAEFDSRLAQLQQKVTSHVNYEEAELFAKLRQHF SDEQLREMGKQFQMAKSRYQDIRQQQMTGRS
Sequences:
>Translated_351_residues MVPIIADDKRLAIAVKLADIKALQELLITIEQRLVTLSDDPDIRKRLGDMLADDQKNLTIIENTIIQYGVKGEPRDTVVE MTDKLNDLMQSSKLSLYDKFSQLELLKHQAAMAGILVHKAAQLVGADIDAAIAPLNTVNFENRAHQEQLKGILEVLGTRE LTGKEADQGLWARVQDSLAALSGVFGSVISHGEGGADMKVTDIVRMDHQKVNMLFGQIQGTNDPAKKLEFFNQLYGDLSA HAEAEDQTWYADLKRFDDSIEKAEFAYKDQDELVALLEQVKTSGIDSAEFDSRLAQLQQKVTSHVNYEEAELFAKLRQHF SDEQLREMGKQFQMAKSRYQDIRQQQMTGRS >Mature_351_residues MVPIIADDKRLAIAVKLADIKALQELLITIEQRLVTLSDDPDIRKRLGDMLADDQKNLTIIENTIIQYGVKGEPRDTVVE MTDKLNDLMQSSKLSLYDKFSQLELLKHQAAMAGILVHKAAQLVGADIDAAIAPLNTVNFENRAHQEQLKGILEVLGTRE LTGKEADQGLWARVQDSLAALSGVFGSVISHGEGGADMKVTDIVRMDHQKVNMLFGQIQGTNDPAKKLEFFNQLYGDLSA HAEAEDQTWYADLKRFDDSIEKAEFAYKDQDELVALLEQVKTSGIDSAEFDSRLAQLQQKVTSHVNYEEAELFAKLRQHF SDEQLREMGKQFQMAKSRYQDIRQQQMTGRS
Specific function: Acts as a DNA nickase [H]
COG id: COG5592
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemerythrin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012312 [H]
Pfam domain/function: PF01814 Hemerythrin [H]
EC number: NA
Molecular weight: Translated: 39451; Mature: 39451
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPIIADDKRLAIAVKLADIKALQELLITIEQRLVTLSDDPDIRKRLGDMLADDQKNLTI CCCCEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEH IENTIIQYGVKGEPRDTVVEMTDKLNDLMQSSKLSLYDKFSQLELLKHQAAMAGILVHKA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQLVGADIDAAIAPLNTVNFENRAHQEQLKGILEVLGTRELTGKEADQGLWARVQDSLAA HHHHCCCHHHHHCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH LSGVFGSVISHGEGGADMKVTDIVRMDHQKVNMLFGQIQGTNDPAKKLEFFNQLYGDLSA HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH HAEAEDQTWYADLKRFDDSIEKAEFAYKDQDELVALLEQVKTSGIDSAEFDSRLAQLQQK CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VTSHVNYEEAELFAKLRQHFSDEQLREMGKQFQMAKSRYQDIRQQQMTGRS HHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVPIIADDKRLAIAVKLADIKALQELLITIEQRLVTLSDDPDIRKRLGDMLADDQKNLTI CCCCEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEH IENTIIQYGVKGEPRDTVVEMTDKLNDLMQSSKLSLYDKFSQLELLKHQAAMAGILVHKA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQLVGADIDAAIAPLNTVNFENRAHQEQLKGILEVLGTRELTGKEADQGLWARVQDSLAA HHHHCCCHHHHHCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH LSGVFGSVISHGEGGADMKVTDIVRMDHQKVNMLFGQIQGTNDPAKKLEFFNQLYGDLSA HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH HAEAEDQTWYADLKRFDDSIEKAEFAYKDQDELVALLEQVKTSGIDSAEFDSRLAQLQQK CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VTSHVNYEEAELFAKLRQHFSDEQLREMGKQFQMAKSRYQDIRQQQMTGRS HHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]