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The map label for this gene is petE [H]

Identifier: 37521845

GI number: 37521845

Start: 2440032

End: 2440526

Strand: Direct

Name: petE [H]

Synonym: gvip308

Alternate gene names: 37521845

Gene position: 2440032-2440526 (Clockwise)

Preceding gene: 37521844

Following gene: 37521846

Centisome position: 52.37

GC content: 63.64

Gene sequence:

>495_bases
GTGAAAAAAGCCCCCGTATCCTTCGCGATTGCTCTGGTGGTATTGTTGAGCGCCTGTGGCGGTGGTGAGACGACCACCAC
GACCACGACCACCGAAACCACCCCCGCTCCCACCGAGCCCAGTGCCACCGCTCCGGCAGAACCCACCGCCTCGGCGCCTG
CTGAGCCCGCCGTCCCTGCCCCCGGCGAGGGTCTTGTCGTCAAGATGGGTTCAGATACGGGCCAACTGGTCTTCGTGCCG
GCAAAGCTCACCGTCAAGCCCGGCGACAAAATTGTCTGGCTGATGAACAAAGCCGGTCCCCACAACGCCGTTTTTGACGC
AAACGTCCCCGACCCGGCTGCCGCCAAGGCGATGGCGCTCACCAAGCTGCTCAACAAGCCCGGCGACAAACTCGAAGTGA
CCGTACCGGCAAACGCCAAACCCGGCGACTACGCCTTCAACTGCACGCCCCACAAGTCGGCGGGTATGGTCGGGGTCCTA
ACCGTCCAGCAGTAG

Upstream 100 bases:

>100_bases
CTTGTTAGATGCCGCGCTCTCCTGCCTATCGGGGGACAGAGCGAGTCCGGGCGACGGGTTGGTTAGATTGGAATTCAAGG
TTAGTGCAAAGGAAACTTCC

Downstream 100 bases:

>100_bases
GAGCCCACCAATCTTCAGGAGTGCCGCAGGCATGTGAACTTTGGCTGTCCGGTTCAGAGGACAAGAACTGAGGCGCGAAG
TGATGCCTTCGTATTTTGTC

Product: plastocyanin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MKKAPVSFAIALVVLLSACGGGETTTTTTTTETTPAPTEPSATAPAEPTASAPAEPAVPAPGEGLVVKMGSDTGQLVFVP
AKLTVKPGDKIVWLMNKAGPHNAVFDANVPDPAAAKAMALTKLLNKPGDKLEVTVPANAKPGDYAFNCTPHKSAGMVGVL
TVQQ

Sequences:

>Translated_164_residues
MKKAPVSFAIALVVLLSACGGGETTTTTTTTETTPAPTEPSATAPAEPTASAPAEPAVPAPGEGLVVKMGSDTGQLVFVP
AKLTVKPGDKIVWLMNKAGPHNAVFDANVPDPAAAKAMALTKLLNKPGDKLEVTVPANAKPGDYAFNCTPHKSAGMVGVL
TVQQ
>Mature_164_residues
MKKAPVSFAIALVVLLSACGGGETTTTTTTTETTPAPTEPSATAPAEPTASAPAEPAVPAPGEGLVVKMGSDTGQLVFVP
AKLTVKPGDKIVWLMNKAGPHNAVFDANVPDPAAAKAMALTKLLNKPGDKLEVTVPANAKPGDYAFNCTPHKSAGMVGVL
TVQQ

Specific function: Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I [H]

COG id: COG3794

COG function: function code C; Plastocyanin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 plastocyanin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000923
- InterPro:   IPR001235
- InterPro:   IPR008972
- InterPro:   IPR002387 [H]

Pfam domain/function: PF00127 Copper-bind [H]

EC number: NA

Molecular weight: Translated: 16570; Mature: 16570

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00196 COPPER_BLUE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAPVSFAIALVVLLSACGGGETTTTTTTTETTPAPTEPSATAPAEPTASAPAEPAVPA
CCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PGEGLVVKMGSDTGQLVFVPAKLTVKPGDKIVWLMNKAGPHNAVFDANVPDPAAAKAMAL
CCCCEEEEECCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCEEEECCCCCHHHHHHHHH
TKLLNKPGDKLEVTVPANAKPGDYAFNCTPHKSAGMVGVLTVQQ
HHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCCEEEEEEECC
>Mature Secondary Structure
MKKAPVSFAIALVVLLSACGGGETTTTTTTTETTPAPTEPSATAPAEPTASAPAEPAVPA
CCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PGEGLVVKMGSDTGQLVFVPAKLTVKPGDKIVWLMNKAGPHNAVFDANVPDPAAAKAMAL
CCCCEEEEECCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCEEEECCCCCHHHHHHHHH
TKLLNKPGDKLEVTVPANAKPGDYAFNCTPHKSAGMVGVLTVQQ
HHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9473522 [H]