| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
Click here to switch to the map view.
The map label for this gene is 37521822
Identifier: 37521822
GI number: 37521822
Start: 2414643
End: 2415923
Strand: Reverse
Name: 37521822
Synonym: gll2253
Alternate gene names: NA
Gene position: 2415923-2414643 (Counterclockwise)
Preceding gene: 37521823
Following gene: 37521821
Centisome position: 51.85
GC content: 69.48
Gene sequence:
>1281_bases GTGTCGGCAATTTACAGCCGGTCGCGATTGCAAGCCACCATCCGCACGCAAAGGAGCGCGCGAGCCGCTATGCTCACCTT TGGCCAACTCGTCTACACCAGTGTCGCCGGACAGGGCTTTCAGTTGTTCGCCAGCGCCGGGGTGCCGCCGGAGGTGCGCA GGGTGTTTTTGGAGCAGGTGGTCGAGCGCCACTGGAATCCCTATGAACTGCCCCAGCAGGGTTATCGCTCGGTCTACCTG CACCAGGCCGGCTCCGGTCACCAGCTGTTCGGGTGGCTGTACGACGACGGCGGCGATGAATTTGGCCGTGGCCATGTACC GTATTTTCTGTGCTACTACCTCGAAGACACCCTCGACGCGACGAAGCTGGAGAACGTCTTCACCTGTCTGCAGCGGGGTC CGGCAGCGATCGACGATCGCCGCTGCTTGCCTGAGCGCATCGAAGCTGTGCCCGCACCAGACCTGTGGAGCTACCGGCCC GAGCGTCCCGGGGTGATGATTCCGGCGCAGGCGCGCACCGCCGGTCACCGGCTGCTGGAGGAGGGCCATCTGGTCCACCT GTACATCCCCGCGCCGCCGGAGGCCCTGGTACCGGCGCCTTCCTTGCAACCCGAGGCCGCCTCGCCTGCGCCGGCCGGGC GACGTCGGTTGACCTTGCCCCGTCTCGGGCTGGCGGTGGGGGTCGTGGGCCTGCTGGGGCTGGGGGGTGCCGGAGCGGCG CGCTACTGGCAGGACCGGCCGACCGAGCCGCAGGCCAGGAGCGCTGGCGCACTACCCGAACGGCTGGCTCGGGTGAACAC GCCGCCCGCCTTGCCGCCGATACCGGCCGACCCCCCCGCCCAAAAGCGCGAGCTTGTGCGCCCCATCCCACCGCCTCGGG GGCCAAAGTCCCGCCCCGCACGCCCTGAAAAAACGGACGCGACCCGCAGCGAGGCTGCCGCCAGACCCGCCCGGTCCGCC CGCCCCTCCCCGGTGCTGCGCAAACGCAACACCGGCTCCGGCCGTAGGGTTGCAGCCTCCCCGGTCCGGGCGCGCAAAAA AGTGGTCCTCAAGTCGGAGCCCTCCCCGGTCACCAACACCCGACGGGATGCACCGCGCACCACCAACCGCACACGGCGCA GCGCCTACCTGGCCCGCGACGAAGCGCGGGCGGTGCGCCGGACAGAGTTGGAGTACGGACCTTCCCAGGCACTCGAGATT TATCTGGCCCGGGAGCGCGCCCAGGCCGCCGCCGATGCCGAGCGGATGTACGGCCTGTGGCGCAAAAATCGCAAGCGCTG A
Upstream 100 bases:
>100_bases TCGATGGAAGTTTGGCCTTCACGGCGGGTATCGCTCATTCAATGTAAAGCGTTGTATATTTCTGTGAATTCCTAGGGGAA AAGGCTGTTTCTGATCGCAA
Downstream 100 bases:
>100_bases TACAGTTTCGGGTTTCATGTGTCCGGTGTCCGTAAGTGCACCCCGATACCCATCCGCTTGCCAGTCATCCGCGCGCACGG GACAATACCGGTTAGTTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Roadblock/LC7 Family Protein; WD-40 Repeat-Containing Protein
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MSAIYSRSRLQATIRTQRSARAAMLTFGQLVYTSVAGQGFQLFASAGVPPEVRRVFLEQVVERHWNPYELPQQGYRSVYL HQAGSGHQLFGWLYDDGGDEFGRGHVPYFLCYYLEDTLDATKLENVFTCLQRGPAAIDDRRCLPERIEAVPAPDLWSYRP ERPGVMIPAQARTAGHRLLEEGHLVHLYIPAPPEALVPAPSLQPEAASPAPAGRRRLTLPRLGLAVGVVGLLGLGGAGAA RYWQDRPTEPQARSAGALPERLARVNTPPALPPIPADPPAQKRELVRPIPPPRGPKSRPARPEKTDATRSEAAARPARSA RPSPVLRKRNTGSGRRVAASPVRARKKVVLKSEPSPVTNTRRDAPRTTNRTRRSAYLARDEARAVRRTELEYGPSQALEI YLARERAQAAADAERMYGLWRKNRKR
Sequences:
>Translated_426_residues MSAIYSRSRLQATIRTQRSARAAMLTFGQLVYTSVAGQGFQLFASAGVPPEVRRVFLEQVVERHWNPYELPQQGYRSVYL HQAGSGHQLFGWLYDDGGDEFGRGHVPYFLCYYLEDTLDATKLENVFTCLQRGPAAIDDRRCLPERIEAVPAPDLWSYRP ERPGVMIPAQARTAGHRLLEEGHLVHLYIPAPPEALVPAPSLQPEAASPAPAGRRRLTLPRLGLAVGVVGLLGLGGAGAA RYWQDRPTEPQARSAGALPERLARVNTPPALPPIPADPPAQKRELVRPIPPPRGPKSRPARPEKTDATRSEAAARPARSA RPSPVLRKRNTGSGRRVAASPVRARKKVVLKSEPSPVTNTRRDAPRTTNRTRRSAYLARDEARAVRRTELEYGPSQALEI YLARERAQAAADAERMYGLWRKNRKR >Mature_425_residues SAIYSRSRLQATIRTQRSARAAMLTFGQLVYTSVAGQGFQLFASAGVPPEVRRVFLEQVVERHWNPYELPQQGYRSVYLH QAGSGHQLFGWLYDDGGDEFGRGHVPYFLCYYLEDTLDATKLENVFTCLQRGPAAIDDRRCLPERIEAVPAPDLWSYRPE RPGVMIPAQARTAGHRLLEEGHLVHLYIPAPPEALVPAPSLQPEAASPAPAGRRRLTLPRLGLAVGVVGLLGLGGAGAAR YWQDRPTEPQARSAGALPERLARVNTPPALPPIPADPPAQKRELVRPIPPPRGPKSRPARPEKTDATRSEAAARPARSAR PSPVLRKRNTGSGRRVAASPVRARKKVVLKSEPSPVTNTRRDAPRTTNRTRRSAYLARDEARAVRRTELEYGPSQALEIY LARERAQAAADAERMYGLWRKNRKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47236; Mature: 47105
Theoretical pI: Translated: 11.14; Mature: 11.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIYSRSRLQATIRTQRSARAAMLTFGQLVYTSVAGQGFQLFASAGVPPEVRRVFLEQV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH VERHWNPYELPQQGYRSVYLHQAGSGHQLFGWLYDDGGDEFGRGHVPYFLCYYLEDTLDA HHHCCCCCCCCHHHCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEEHHHHHHHH TKLENVFTCLQRGPAAIDDRRCLPERIEAVPAPDLWSYRPERPGVMIPAQARTAGHRLLE HHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHH EGHLVHLYIPAPPEALVPAPSLQPEAASPAPAGRRRLTLPRLGLAVGVVGLLGLGGAGAA CCCEEEEEECCCCHHCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCCCHH RYWQDRPTEPQARSAGALPERLARVNTPPALPPIPADPPAQKRELVRPIPPPRGPKSRPA HHCCCCCCCCCHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCC RPEKTDATRSEAAARPARSARPSPVLRKRNTGSGRRVAASPVRARKKVVLKSEPSPVTNT CCCCCCCHHHHHHHCCHHCCCCCCHHHCCCCCCCCEEECCHHHHHHEEEECCCCCCCCCC RRDAPRTTNRTRRSAYLARDEARAVRRTELEYGPSQALEIYLARERAQAAADAERMYGLW CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RKNRKR HHCCCC >Mature Secondary Structure SAIYSRSRLQATIRTQRSARAAMLTFGQLVYTSVAGQGFQLFASAGVPPEVRRVFLEQV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH VERHWNPYELPQQGYRSVYLHQAGSGHQLFGWLYDDGGDEFGRGHVPYFLCYYLEDTLDA HHHCCCCCCCCHHHCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEEHHHHHHHH TKLENVFTCLQRGPAAIDDRRCLPERIEAVPAPDLWSYRPERPGVMIPAQARTAGHRLLE HHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHH EGHLVHLYIPAPPEALVPAPSLQPEAASPAPAGRRRLTLPRLGLAVGVVGLLGLGGAGAA CCCEEEEEECCCCHHCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCCCHH RYWQDRPTEPQARSAGALPERLARVNTPPALPPIPADPPAQKRELVRPIPPPRGPKSRPA HHCCCCCCCCCHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCC RPEKTDATRSEAAARPARSARPSPVLRKRNTGSGRRVAASPVRARKKVVLKSEPSPVTNT CCCCCCCHHHHHHHCCHHCCCCCCHHHCCCCCCCCEEECCHHHHHHEEEECCCCCCCCCC RRDAPRTTNRTRRSAYLARDEARAVRRTELEYGPSQALEIYLARERAQAAADAERMYGLW CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RKNRKR HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA