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The map label for this gene is nblB

Identifier: 37521803

GI number: 37521803

Start: 2392848

End: 2393495

Strand: Direct

Name: nblB

Synonym: gvip306

Alternate gene names: NA

Gene position: 2392848-2393495 (Clockwise)

Preceding gene: 37521802

Following gene: 37521804

Centisome position: 51.36

GC content: 66.51

Gene sequence:

>648_bases
ATGGAAACTCCAGAAGAGAAACTGGCAAGCCCGAACCTGGGCGATCGCCTCAGCGCGGTGGGTGCGCTGCGGGACATACC
CGCTGAGCACTCGGTGGCGCTGTTGGTCAAAGCGGCCCAGGACGACAATGCCCGCGTGCGCTACGCCGCTGTGAGCCTGC
TGGGCCAAAAAGAGGACCGCTCTGTCCTGGGCTTGCTGCGAACCTTGCTCACCTCGGACCCGGAATTTGACGTGCGCGCC
GCCGCCGCCGCCGCCCTGGGCGATTTGCACGCCCAGGAAGCCTACGAAGATTTGGCCGCCGCCTTTGCCCAGGACAACGA
GTGGCTGGTCAGATTCAGCATCCTGGCCGCCCTCGGCGAACTGGGCGACCGGCGGGCGGTGGACCTGCTGGTGACGGCCC
TCAAGGGCGACCCGCTCATCCGCACCGTCGCTGCCGGAGCCCTCGGACAGTTGGGCGACCGGCGGGCGGTGGGCGAATTG
GTGGCCTACATCGCCGACGAAGACTGGCAGCTGCGCTTTCGCATCGCCCAGGCTCTCGGCGAACTGGGCGGCGAAGAAGC
GTGCTCTGCATTGCAAACTCTCGCCGCTGATCCCAACGATGCAGTCAGTTCCACGGCCCGTTCCGCCCTCGAACAGCTTG
CGCAATAG

Upstream 100 bases:

>100_bases
CTCTTGCCCGTCTGCGCGAAGAGTTGGGCTGATCCGCCTCCCCCCCGCTCTTCTGGTAAGGTGGATTCCAGAAAAATGGC
GCCGGTGGGGATCACAACGC

Downstream 100 bases:

>100_bases
CCTGGACTTGTCCAAAATCCGATCTGGAAGCTTTCCTTAAATCATCCCCGAGCGCGGGCAAATGGTATTCTGCGAAACAT
TAGTATCTGTCACAATGCGT

Product: phycocyanin alpha phycocyanobilin lyase related protein NblB-like protein

Products: NA

Alternate protein names: PBS Lyase HEAT Domain Protein Repeat-Containing Protein; PBS Lyase HEAT-Like Repeat Domain Protein; Phycocyanin Alpha Phycocyanobilin Lyase Related Protein; HEAT Repeat-Containing Protein; Heat Domain-Containing Protein; HEAT Domain Containing Protein; Phycocyanin Alpha Phycocyanobilin Lyase; HEAT Repeat Protein; Peptidase; Phycocyanin Alpha Phycocyanobilin Lyase-Like Protein

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
METPEEKLASPNLGDRLSAVGALRDIPAEHSVALLVKAAQDDNARVRYAAVSLLGQKEDRSVLGLLRTLLTSDPEFDVRA
AAAAALGDLHAQEAYEDLAAAFAQDNEWLVRFSILAALGELGDRRAVDLLVTALKGDPLIRTVAAGALGQLGDRRAVGEL
VAYIADEDWQLRFRIAQALGELGGEEACSALQTLAADPNDAVSSTARSALEQLAQ

Sequences:

>Translated_215_residues
METPEEKLASPNLGDRLSAVGALRDIPAEHSVALLVKAAQDDNARVRYAAVSLLGQKEDRSVLGLLRTLLTSDPEFDVRA
AAAAALGDLHAQEAYEDLAAAFAQDNEWLVRFSILAALGELGDRRAVDLLVTALKGDPLIRTVAAGALGQLGDRRAVGEL
VAYIADEDWQLRFRIAQALGELGGEEACSALQTLAADPNDAVSSTARSALEQLAQ
>Mature_215_residues
METPEEKLASPNLGDRLSAVGALRDIPAEHSVALLVKAAQDDNARVRYAAVSLLGQKEDRSVLGLLRTLLTSDPEFDVRA
AAAAALGDLHAQEAYEDLAAAFAQDNEWLVRFSILAALGELGDRRAVDLLVTALKGDPLIRTVAAGALGQLGDRRAVGEL
VAYIADEDWQLRFRIAQALGELGGEEACSALQTLAADPNDAVSSTARSALEQLAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22755; Mature: 22755

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METPEEKLASPNLGDRLSAVGALRDIPAEHSVALLVKAAQDDNARVRYAAVSLLGQKEDR
CCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHEEEECCCCCCHHHHHHHHHHCCCCHH
SVLGLLRTLLTSDPEFDVRAAAAAALGDLHAQEAYEDLAAAFAQDNEWLVRFSILAALGE
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LGDRRAVDLLVTALKGDPLIRTVAAGALGQLGDRRAVGELVAYIADEDWQLRFRIAQALG
HCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
ELGGEEACSALQTLAADPNDAVSSTARSALEQLAQ
HCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
METPEEKLASPNLGDRLSAVGALRDIPAEHSVALLVKAAQDDNARVRYAAVSLLGQKEDR
CCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHEEEECCCCCCHHHHHHHHHHCCCCHH
SVLGLLRTLLTSDPEFDVRAAAAAALGDLHAQEAYEDLAAAFAQDNEWLVRFSILAALGE
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LGDRRAVDLLVTALKGDPLIRTVAAGALGQLGDRRAVGELVAYIADEDWQLRFRIAQALG
HCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
ELGGEEACSALQTLAADPNDAVSSTARSALEQLAQ
HCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA