| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37521801
Identifier: 37521801
GI number: 37521801
Start: 2391783
End: 2392304
Strand: Direct
Name: 37521801
Synonym: glr2232
Alternate gene names: NA
Gene position: 2391783-2392304 (Clockwise)
Preceding gene: 37521800
Following gene: 37521802
Centisome position: 51.34
GC content: 65.13
Gene sequence:
>522_bases ATGATAGACACCCAGACCGACGACGCCCGCACCTGGCTGCAGTCTGCGCTGCAGCTGATGGGATTTCCCGACGGCGTCCA GGTGGCCGAAGCCCCGGACGACCCCGACGGCCAGCGCTGGCTGGAGATTCCCGAAGAAGCGCTCAGTCCCGCCCAAAAAG AACTGCTGCTCAACCGCGAAGGCGAAGTGCTCGATGCGCTGCAGTTTTTACTCAACACGACGATGCATCTGCAGACCGAC AGCAACCAGCCCTATACCGTCGAACTGGCCGGCCATCGCCTCAAGCGGCAGCAGCAATTGGCCGAGATGGCCCGGGACGC TGCCGCCCAGGTGCGCTCCAGCGGTGAGGAGTTCGTCTTCGGAGCGCTGAGTGCCGCCGAGCGCCGCCAGATCCACATGC TTTTGCAGGACGAGCCGGATCTATCCACGTTTAGCCGCGGCAAAGAACCCGAACGCCGCCTGGTGGTGCGCCCGCGCACC GCGGACGCCGCCGAGGAGAGCCCAGATGCTGCGCTCGATTGA
Upstream 100 bases:
>100_bases CGGAGAACATCCAGCGCATTCTCGATCAGGCCAAGCGCAAAGAGGAGACCGACAAGCCCCTGCCCTTCGAGAACAAGCAG CGCCGCAACAAGAAAAAAGC
Downstream 100 bases:
>100_bases ACTGCGCGCCCTCGCAGCGAGCCCGACGCGCAATCTGACCATCGTCATCGACGAGCCGATCGCGGCTCTGCCGAGCCTCA CGCCCGTGCAGGGCGAACTG
Product: hypothetical protein
Products: NA
Alternate protein names: Jag Protein; R3H Domain-Containing Protein; SpoIIIJ-Associated Protein; Protein Jag
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MIDTQTDDARTWLQSALQLMGFPDGVQVAEAPDDPDGQRWLEIPEEALSPAQKELLLNREGEVLDALQFLLNTTMHLQTD SNQPYTVELAGHRLKRQQQLAEMARDAAAQVRSSGEEFVFGALSAAERRQIHMLLQDEPDLSTFSRGKEPERRLVVRPRT ADAAEESPDAALD
Sequences:
>Translated_173_residues MIDTQTDDARTWLQSALQLMGFPDGVQVAEAPDDPDGQRWLEIPEEALSPAQKELLLNREGEVLDALQFLLNTTMHLQTD SNQPYTVELAGHRLKRQQQLAEMARDAAAQVRSSGEEFVFGALSAAERRQIHMLLQDEPDLSTFSRGKEPERRLVVRPRT ADAAEESPDAALD >Mature_173_residues MIDTQTDDARTWLQSALQLMGFPDGVQVAEAPDDPDGQRWLEIPEEALSPAQKELLLNREGEVLDALQFLLNTTMHLQTD SNQPYTVELAGHRLKRQQQLAEMARDAAAQVRSSGEEFVFGALSAAERRQIHMLLQDEPDLSTFSRGKEPERRLVVRPRT ADAAEESPDAALD
Specific function: Unknown
COG id: COG1847
COG function: function code R; Predicted RNA-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19350; Mature: 19350
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: PS51061 R3H
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDTQTDDARTWLQSALQLMGFPDGVQVAEAPDDPDGQRWLEIPEEALSPAQKELLLNRE CCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHCCCHHHHCHHHHHHHHCCC GEVLDALQFLLNTTMHLQTDSNQPYTVELAGHRLKRQQQLAEMARDAAAQVRSSGEEFVF CHHHHHHHHHHHCHHEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH GALSAAERRQIHMLLQDEPDLSTFSRGKEPERRLVVRPRTADAAEESPDAALD HHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MIDTQTDDARTWLQSALQLMGFPDGVQVAEAPDDPDGQRWLEIPEEALSPAQKELLLNRE CCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHCCCHHHHCHHHHHHHHCCC GEVLDALQFLLNTTMHLQTDSNQPYTVELAGHRLKRQQQLAEMARDAAAQVRSSGEEFVF CHHHHHHHHHHHCHHEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH GALSAAERRQIHMLLQDEPDLSTFSRGKEPERRLVVRPRTADAAEESPDAALD HHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA