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The map label for this gene is yccZ [C]

Identifier: 37521770

GI number: 37521770

Start: 2353388

End: 2354479

Strand: Reverse

Name: yccZ [C]

Synonym: gll2201

Alternate gene names: 37521770

Gene position: 2354479-2353388 (Counterclockwise)

Preceding gene: 37521771

Following gene: 37521769

Centisome position: 50.54

GC content: 66.85

Gene sequence:

>1092_bases
ATGAGCGAGCGTGCCATGAATAGAACCTTTTGGTTGTCCTTAAGCCTCGCCTGCACCGCCGCTGTGGGGGCGGGCCTACC
CGCCCCGGCCCAGCAGGCGGCGGCCCCGGTGGCGAGCTTCGACGCGTCGGTGACCAACCAGGGTTACCGCCTGCGCTCCG
GCGATCAGATCCGCATCGATGTGCTGGGCTTCGTGGACCTTTCGCGCGAGCAGACGATTTTGCCCGACGGCACGATCAAC
ATCATGTACGTGGGCGCGGTGCGCGCCGCCGGGCGCACCCCGGAGGACTTATCTGAGCACCTGCGCAGCCAGTTCACCGG
CATCCTCAAAAAACCGGTGATTGCCGTGTCGGTGATGGAGACGCGGCCCCTGCAGGTCAACGTCGTGGGTGAGGTGATGC
GCCCCGGCCCGCAGGTATTCTTGCCCCAGACCGGCGCTATGGCGACGGGCGGTACCCAGGGCGGCCTCACCCGGCGGGTC
GGGGTCGAGCGCATCTCCAACGCCATCGCCCTGGCCGGTGGGGTCACCCACCGCGCCGACGTGCGACAAGTCACCCTGAT
TCGCCAGCTGCCGGACGGCGATCAAAAAGAGACCGTCAACCTCTGGGAGGCGCTGCAGACCGGCGATTTCCGGCGCGATC
TGACCCTCACCGACGGCGACACCATCCAGGTGCCCACCCTGCCTGCGGACGACAAAATTACCGAGGACATGGCCCAGCAG
GTGGCCACCTCCTCGCTCGCCCCCCGGACGATCAGCGTGCAGGTGGCAGGCGAGGTGAAGCGGCCCGGCTCGGTAGATAT
CGACCCGCGCTCGGGCCTGCTCAACGCCATCTCCGCAGCGGGCGGCGCCACCACCGAAGCCAACCTTGAGGACATCTCGG
TAGCCCGCATGCTCCCCAACGGCCGCATCGAGCGCGTCGCCCTCAACCTCAACAAAGTCTCCGACGGCAGCCAAAAAGTC
CAGGTGCGCAACGGCGATGTCGTCTTCGTCGGCCGCGGCGGCAGCTTTACCGCCGCCGATCAGTCCCGCGCGTTTTTGGG
ACCGCTGGGCGACATACTGCGCATCTTCACCTTCCCGTTCCGCTTTTTCTAG

Upstream 100 bases:

>100_bases
TCGGCACCGTCTTCAACGGCGTCGACGCCGCCGAGGACATGACGGCGAGCTACTACTACGACCGCACCAGCAAGCCCAGA
AAACAGCTGCTTCTTCCCGA

Downstream 100 bases:

>100_bases
AGGCCGCGCTGTTCCTGCCGGGCTGCAGCACCTGCGCGGCCCGGCTTTGTTCCCAGCCCAACGGTTCTTCATAGAGGTGT
GCAAATTATATGAAAGCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Polysaccharide Biosynthesis/Export Protein; Polysaccharide Export Outer Membrane Protein; Polysialic Acid Transporter KpsD; GumB Protein; Polysaccharide Biosynthesis Protein; Polysaccharide Export Periplasmic Protein; Polysialic Acid Transport Protein KpsD; Exopolysaccharide Production Protein; Capsular Polysaccharide Export Protein; Polysialic Acid Transporter; Periplasmic Protein Involved In Polysaccharide Export; Polysaccharide Export Protein Outer Membrane; Capsule Polysaccharide Export System Periplasmic Protein; Capsule Polysaccharide Export Protein; Polysaccharide Export-Related Protein

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MSERAMNRTFWLSLSLACTAAVGAGLPAPAQQAAAPVASFDASVTNQGYRLRSGDQIRIDVLGFVDLSREQTILPDGTIN
IMYVGAVRAAGRTPEDLSEHLRSQFTGILKKPVIAVSVMETRPLQVNVVGEVMRPGPQVFLPQTGAMATGGTQGGLTRRV
GVERISNAIALAGGVTHRADVRQVTLIRQLPDGDQKETVNLWEALQTGDFRRDLTLTDGDTIQVPTLPADDKITEDMAQQ
VATSSLAPRTISVQVAGEVKRPGSVDIDPRSGLLNAISAAGGATTEANLEDISVARMLPNGRIERVALNLNKVSDGSQKV
QVRNGDVVFVGRGGSFTAADQSRAFLGPLGDILRIFTFPFRFF

Sequences:

>Translated_363_residues
MSERAMNRTFWLSLSLACTAAVGAGLPAPAQQAAAPVASFDASVTNQGYRLRSGDQIRIDVLGFVDLSREQTILPDGTIN
IMYVGAVRAAGRTPEDLSEHLRSQFTGILKKPVIAVSVMETRPLQVNVVGEVMRPGPQVFLPQTGAMATGGTQGGLTRRV
GVERISNAIALAGGVTHRADVRQVTLIRQLPDGDQKETVNLWEALQTGDFRRDLTLTDGDTIQVPTLPADDKITEDMAQQ
VATSSLAPRTISVQVAGEVKRPGSVDIDPRSGLLNAISAAGGATTEANLEDISVARMLPNGRIERVALNLNKVSDGSQKV
QVRNGDVVFVGRGGSFTAADQSRAFLGPLGDILRIFTFPFRFF
>Mature_362_residues
SERAMNRTFWLSLSLACTAAVGAGLPAPAQQAAAPVASFDASVTNQGYRLRSGDQIRIDVLGFVDLSREQTILPDGTINI
MYVGAVRAAGRTPEDLSEHLRSQFTGILKKPVIAVSVMETRPLQVNVVGEVMRPGPQVFLPQTGAMATGGTQGGLTRRVG
VERISNAIALAGGVTHRADVRQVTLIRQLPDGDQKETVNLWEALQTGDFRRDLTLTDGDTIQVPTLPADDKITEDMAQQV
ATSSLAPRTISVQVAGEVKRPGSVDIDPRSGLLNAISAAGGATTEANLEDISVARMLPNGRIERVALNLNKVSDGSQKVQ
VRNGDVVFVGRGGSFTAADQSRAFLGPLGDILRIFTFPFRFF

Specific function: May Be Involved In Polysaccharide Transport. [C]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Integral Membrane Protein. Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787218, Length=326, Percent_Identity=26.0736196319018, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1788376, Length=296, Percent_Identity=24.3243243243243, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38732; Mature: 38600

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERAMNRTFWLSLSLACTAAVGAGLPAPAQQAAAPVASFDASVTNQGYRLRSGDQIRID
CCCCCCCEEEEEEEHHHHHHHHCCCCCCCHHHHHCCHHHCCCHHCCCCEEECCCCEEEEE
VLGFVDLSREQTILPDGTINIMYVGAVRAAGRTPEDLSEHLRSQFTGILKKPVIAVSVME
EEEEEECCCCCEECCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEC
TRPLQVNVVGEVMRPGPQVFLPQTGAMATGGTQGGLTRRVGVERISNAIALAGGVTHRAD
CCCEEEEEEHHHHCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCH
VRQVTLIRQLPDGDQKETVNLWEALQTGDFRRDLTLTDGDTIQVPTLPADDKITEDMAQQ
HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHH
VATSSLAPRTISVQVAGEVKRPGSVDIDPRSGLLNAISAAGGATTEANLEDISVARMLPN
HHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCC
GRIERVALNLNKVSDGSQKVQVRNGDVVFVGRGGSFTAADQSRAFLGPLGDILRIFTFPF
CCEEEEEEEEEECCCCCCEEEEECCCEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHH
RFF
HCC
>Mature Secondary Structure 
SERAMNRTFWLSLSLACTAAVGAGLPAPAQQAAAPVASFDASVTNQGYRLRSGDQIRID
CCCCCCEEEEEEEHHHHHHHHCCCCCCCHHHHHCCHHHCCCHHCCCCEEECCCCEEEEE
VLGFVDLSREQTILPDGTINIMYVGAVRAAGRTPEDLSEHLRSQFTGILKKPVIAVSVME
EEEEEECCCCCEECCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEC
TRPLQVNVVGEVMRPGPQVFLPQTGAMATGGTQGGLTRRVGVERISNAIALAGGVTHRAD
CCCEEEEEEHHHHCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCH
VRQVTLIRQLPDGDQKETVNLWEALQTGDFRRDLTLTDGDTIQVPTLPADDKITEDMAQQ
HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHH
VATSSLAPRTISVQVAGEVKRPGSVDIDPRSGLLNAISAAGGATTEANLEDISVARMLPN
HHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCC
GRIERVALNLNKVSDGSQKVQVRNGDVVFVGRGGSFTAADQSRAFLGPLGDILRIFTFPF
CCEEEEEEEEEECCCCCCEEEEECCCEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHH
RFF
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA