Click here to switch to the map view.

The map label for this gene is wcaL [H]

Identifier: 37521766

GI number: 37521766

Start: 2348942

End: 2350063

Strand: Reverse

Name: wcaL [H]

Synonym: gll2197

Alternate gene names: 37521766

Gene position: 2350063-2348942 (Counterclockwise)

Preceding gene: 37521767

Following gene: 37521765

Centisome position: 50.44

GC content: 67.38

Gene sequence:

>1122_bases
ATGAAAAATGTCGGCATCTGTCGTATGGTCTTCCCGTGCGTCTCGGAGACTTTTATCGTCGAGCAGGCGAGCCATCTGCG
GCGCTACCACCCCACCTTCGTGGTCGCCAGGCTGCTCCGGGAGGTGCCCTTCGACAACGTCAAACTGACGGCGGCAAGCC
TATGGGGATGGCAGGAGCGGCTTTTTTGGCTGACGCGCCAGGCGGGGGGGCGCGCGCGCCACGAGGCCCTCAGGCGCCTG
CCGCTGCTGCACGCCCACTTCGGGCGCGACGGGGTCTACGCCCTGGCCCTCGCCGAGGCGATCGACATCCCGCTGGTGGT
CACCTACCACGGCTTCGACGCCACCGCTTCGCCTCTGGCGCTGTGGTGCTCGCGCGGGCTGATGAATTACCAGTTTTTGC
TGCACGAGGCGGCCCTGCAGCGCCGAGCCGCCGCGATCATTGCCGTCTCCGACTTCATTCGCGAGCGGTTGCTCGCCAAA
GGCTGCCCGCCCGAGAAGATCATCCGCCACTACATCGGCATCGACACCGCCAAGTTCACCCCCGCCGAACGACCGGCCGA
TGAGCGCTATATTCTCTGCGTCGGCCGCCACGCCAAGCGCAAAGGGATCGATGTGCTCATCGAGGCGTTCGCCCGCATTG
CCGCGCGCCATCCGGAGGTGGCGCTGGTGCAGATCGGCGCTGGGGCGCTCACCGGCGAATTGCAGGCGCTTGCCCGGCGG
CTGGGGGTGGCCGGTCGGGTGCGCTTTTTGGGAGCCCAGCCCCACGCCCGGGTGATCGAATGGATGCGCGGGGCGGAAAT
CTTTTCGCTGCCCAGCCGCACCTCCCGAAGCGGCGACAGCGAAGCGCTGGGCATCGTCTTCAACGAAGCCTCCGCCTGCG
CGGTGCCGGTGGTCTCCACCCGCCACGGCGGCATCCCGGAGGCGATCCTGGATGGTGAGACGGGCCTGCTCGCCCCGGAA
GGAGATGCCGTCGCCCTGGCAGAAAAGCTGGATATTTTGCTCGCGGACCGCGGCCTCGGCCGACGTCTGGGCCTGCGGGG
GCGGGAGTTCGTGTGCGAACAGTTCGACATCGACACCCAGACCGCCAAGCTTGAAGCTGTCTACGACCGGTTTGCCGCCT
GA

Upstream 100 bases:

>100_bases
CGACGGGCGCTTCAAGATTACCCTCGCCGAGCGCGCCAGGCTCTTTCGGCGCTATTTTGGCCACCACACCTTCTTCCGCT
TCGACTTTCTGGCCTAACCT

Downstream 100 bases:

>100_bases
AAGGCCTATTGTTTCGCTACAGGAATGTGATGGTGAAGTTCCTGCCCAAGTTGAACCTGCGCCGCTTCGAGACGCCGCGG
CTGTTGTTTCGGGGAGTCGA

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MKNVGICRMVFPCVSETFIVEQASHLRRYHPTFVVARLLREVPFDNVKLTAASLWGWQERLFWLTRQAGGRARHEALRRL
PLLHAHFGRDGVYALALAEAIDIPLVVTYHGFDATASPLALWCSRGLMNYQFLLHEAALQRRAAAIIAVSDFIRERLLAK
GCPPEKIIRHYIGIDTAKFTPAERPADERYILCVGRHAKRKGIDVLIEAFARIAARHPEVALVQIGAGALTGELQALARR
LGVAGRVRFLGAQPHARVIEWMRGAEIFSLPSRTSRSGDSEALGIVFNEASACAVPVVSTRHGGIPEAILDGETGLLAPE
GDAVALAEKLDILLADRGLGRRLGLRGREFVCEQFDIDTQTAKLEAVYDRFAA

Sequences:

>Translated_373_residues
MKNVGICRMVFPCVSETFIVEQASHLRRYHPTFVVARLLREVPFDNVKLTAASLWGWQERLFWLTRQAGGRARHEALRRL
PLLHAHFGRDGVYALALAEAIDIPLVVTYHGFDATASPLALWCSRGLMNYQFLLHEAALQRRAAAIIAVSDFIRERLLAK
GCPPEKIIRHYIGIDTAKFTPAERPADERYILCVGRHAKRKGIDVLIEAFARIAARHPEVALVQIGAGALTGELQALARR
LGVAGRVRFLGAQPHARVIEWMRGAEIFSLPSRTSRSGDSEALGIVFNEASACAVPVVSTRHGGIPEAILDGETGLLAPE
GDAVALAEKLDILLADRGLGRRLGLRGREFVCEQFDIDTQTAKLEAVYDRFAA
>Mature_373_residues
MKNVGICRMVFPCVSETFIVEQASHLRRYHPTFVVARLLREVPFDNVKLTAASLWGWQERLFWLTRQAGGRARHEALRRL
PLLHAHFGRDGVYALALAEAIDIPLVVTYHGFDATASPLALWCSRGLMNYQFLLHEAALQRRAAAIIAVSDFIRERLLAK
GCPPEKIIRHYIGIDTAKFTPAERPADERYILCVGRHAKRKGIDVLIEAFARIAARHPEVALVQIGAGALTGELQALARR
LGVAGRVRFLGAQPHARVIEWMRGAEIFSLPSRTSRSGDSEALGIVFNEASACAVPVVSTRHGGIPEAILDGETGLLAPE
GDAVALAEKLDILLADRGLGRRLGLRGREFVCEQFDIDTQTAKLEAVYDRFAA

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI1788357, Length=242, Percent_Identity=32.6446280991736, Blast_Score=112, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI17532709, Length=233, Percent_Identity=28.3261802575107, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24654571, Length=151, Percent_Identity=32.4503311258278, Blast_Score=66, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 41164; Mature: 41164

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNVGICRMVFPCVSETFIVEQASHLRRYHPTFVVARLLREVPFDNVKLTAASLWGWQER
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHH
LFWLTRQAGGRARHEALRRLPLLHAHFGRDGVYALALAEAIDIPLVVTYHGFDATASPLA
HHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHH
LWCSRGLMNYQFLLHEAALQRRAAAIIAVSDFIRERLLAKGCPPEKIIRHYIGIDTAKFT
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC
PAERPADERYILCVGRHAKRKGIDVLIEAFARIAARHPEVALVQIGAGALTGELQALARR
CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHH
LGVAGRVRFLGAQPHARVIEWMRGAEIFSLPSRTSRSGDSEALGIVFNEASACAVPVVST
HCCCCEEEEECCCCHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEEECCCCCEECEEEC
RHGGIPEAILDGETGLLAPEGDAVALAEKLDILLADRGLGRRLGLRGREFVCEQFDIDTQ
CCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCHHCCCCCHHHHHHHCCCCCH
TAKLEAVYDRFAA
HHHHHHHHHHHCC
>Mature Secondary Structure
MKNVGICRMVFPCVSETFIVEQASHLRRYHPTFVVARLLREVPFDNVKLTAASLWGWQER
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHH
LFWLTRQAGGRARHEALRRLPLLHAHFGRDGVYALALAEAIDIPLVVTYHGFDATASPLA
HHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHH
LWCSRGLMNYQFLLHEAALQRRAAAIIAVSDFIRERLLAKGCPPEKIIRHYIGIDTAKFT
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC
PAERPADERYILCVGRHAKRKGIDVLIEAFARIAARHPEVALVQIGAGALTGELQALARR
CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHH
LGVAGRVRFLGAQPHARVIEWMRGAEIFSLPSRTSRSGDSEALGIVFNEASACAVPVVST
HCCCCEEEEECCCCHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEEECCCCCEECEEEC
RHGGIPEAILDGETGLLAPEGDAVALAEKLDILLADRGLGRRLGLRGREFVCEQFDIDTQ
CCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCHHCCCCCHHHHHHHCCCCCH
TAKLEAVYDRFAA
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]