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The map label for this gene is ybbK [C]

Identifier: 37521743

GI number: 37521743

Start: 2323555

End: 2324511

Strand: Reverse

Name: ybbK [C]

Synonym: gll2174

Alternate gene names: 37521743

Gene position: 2324511-2323555 (Counterclockwise)

Preceding gene: 37521744

Following gene: 37521742

Centisome position: 49.89

GC content: 64.26

Gene sequence:

>957_bases
GTGGAAATTTTTCTGTTTGCAATCGGGTTTATCCTCCTGGCCACGATCGTGGCCGGGGTCAAAATCATCAACCAGGGCGA
CGAAGCGCTCGTCGAACGCTTGGGCCGCTTTCACGCCAGACTCACCCCGGGCCTGCACATCATCATTCCCTATATCGACC
GGCTCGCCTTCAAAGAAACCATCCGCGAGCAGGTGCTCGACATCCAGCCCCAGACGGCCATCACCCGCGACAACGTCTCC
CTCGACGCCGACGCGGTCATCTACTGGCGGATCGTCGATGTGCGCAAGGCTTACTACTCGGTGGCCAATATCCGTCAGGC
GATGAGCAATCTGGTGCTCACCGCCCTGCGCTCCGAGATCGGCAAACTCGAACTCGACGAGACGTTCGCTTCGCGCGCCG
AAATTAACCAGGCCCTGCTCGATCAGCTCGACACCGCCACCGATCCCTGGGGGATCAAAGTCACCCGCGTCGAGGTGCGC
AACATTGCCCCGTCGCGCACGGTGCTCGATTCGATGGAGCAGCAGATGGCGGCTGAACGCCGCAAGCGCGCGGTGATCCT
CAACTCCGAGGGCGAGCGCCAGTCGGCCATCAACAGCGCCCAGGGCGAAGCCTCGGCGCGCATCGCCCGGGCTGAGGCCG
AACGCCAGGAGCAGATCCTCCAGGCCCAGGGCACCGCCGAGGCGCTGCGCACCCTGGCTGAGACCCTGAGCGATCCCAAA
GCCCGCGAGGCGCTGCAGTTTTATCTGGCCCGCAACTACCTCGACGTCGCCAACGCCGTCGGTGCCTCCCCGAGCAGCAA
GGTGCTCTTCATGGACCCGGCCTCGATCCCGGCTGCGCTTGGCGCTCTACTGTCGCTTGCCGACAAGAGCGACGAGGGCG
ATGGGCAAAAAACCAACGGCGCCCCGGCCATCCTGCCGCCGCTGCATTTGCGCGAACGACCCAAGGTCGAAGGCTAG

Upstream 100 bases:

>100_bases
AAGGTAATGGTGCTGGGAAGGCAGGGCAATGTGCTCGACGTGATGCCCCTCGGGGCGCTCAAGGAAGCCCCGCCGGGGCC
TTGAAGAAGGAGAGACTGCG

Downstream 100 bases:

>100_bases
GTGCTCCTGTGGACCTCGAAGGCATCGACATCGTCCTAGGCAGACCGGATCTGAGCCTCGCCGCCTTCGTGGCCCCGGAC
GCGGTGGTGGTGGGCCGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MEIFLFAIGFILLATIVAGVKIINQGDEALVERLGRFHARLTPGLHIIIPYIDRLAFKETIREQVLDIQPQTAITRDNVS
LDADAVIYWRIVDVRKAYYSVANIRQAMSNLVLTALRSEIGKLELDETFASRAEINQALLDQLDTATDPWGIKVTRVEVR
NIAPSRTVLDSMEQQMAAERRKRAVILNSEGERQSAINSAQGEASARIARAEAERQEQILQAQGTAEALRTLAETLSDPK
AREALQFYLARNYLDVANAVGASPSSKVLFMDPASIPAALGALLSLADKSDEGDGQKTNGAPAILPPLHLRERPKVEG

Sequences:

>Translated_318_residues
MEIFLFAIGFILLATIVAGVKIINQGDEALVERLGRFHARLTPGLHIIIPYIDRLAFKETIREQVLDIQPQTAITRDNVS
LDADAVIYWRIVDVRKAYYSVANIRQAMSNLVLTALRSEIGKLELDETFASRAEINQALLDQLDTATDPWGIKVTRVEVR
NIAPSRTVLDSMEQQMAAERRKRAVILNSEGERQSAINSAQGEASARIARAEAERQEQILQAQGTAEALRTLAETLSDPK
AREALQFYLARNYLDVANAVGASPSSKVLFMDPASIPAALGALLSLADKSDEGDGQKTNGAPAILPPLHLRERPKVEG
>Mature_318_residues
MEIFLFAIGFILLATIVAGVKIINQGDEALVERLGRFHARLTPGLHIIIPYIDRLAFKETIREQVLDIQPQTAITRDNVS
LDADAVIYWRIVDVRKAYYSVANIRQAMSNLVLTALRSEIGKLELDETFASRAEINQALLDQLDTATDPWGIKVTRVEVR
NIAPSRTVLDSMEQQMAAERRKRAVILNSEGERQSAINSAQGEASARIARAEAERQEQILQAQGTAEALRTLAETLSDPK
AREALQFYLARNYLDVANAVGASPSSKVLFMDPASIPAALGALLSLADKSDEGDGQKTNGAPAILPPLHLRERPKVEG

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=268, Percent_Identity=39.1791044776119, Blast_Score=189, Evalue=3e-48,
Organism=Homo sapiens, GI21686995, Length=217, Percent_Identity=34.5622119815668, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI221316744, Length=217, Percent_Identity=34.5622119815668, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI38016911, Length=227, Percent_Identity=33.0396475770925, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI7657615, Length=166, Percent_Identity=28.3132530120482, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI1786697, Length=304, Percent_Identity=39.1447368421053, Blast_Score=223, Evalue=1e-59,
Organism=Escherichia coli, GI1790617, Length=310, Percent_Identity=25.1612903225806, Blast_Score=67, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI32564147, Length=245, Percent_Identity=38.7755102040816, Blast_Score=162, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI17569493, Length=308, Percent_Identity=28.8961038961039, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI193209764, Length=202, Percent_Identity=33.1683168316832, Blast_Score=101, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI71987621, Length=271, Percent_Identity=29.8892988929889, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17569499, Length=157, Percent_Identity=35.031847133758, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI25153583, Length=160, Percent_Identity=33.75, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71987612, Length=160, Percent_Identity=33.75, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI32566490, Length=225, Percent_Identity=29.3333333333333, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71989948, Length=239, Percent_Identity=31.7991631799163, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71989955, Length=182, Percent_Identity=34.6153846153846, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17569497, Length=195, Percent_Identity=30.2564102564103, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI193210507, Length=168, Percent_Identity=32.7380952380952, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17570161, Length=168, Percent_Identity=32.7380952380952, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17570459, Length=269, Percent_Identity=28.6245353159851, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI45550506, Length=280, Percent_Identity=35.7142857142857, Blast_Score=186, Evalue=2e-47,
Organism=Drosophila melanogaster, GI45556022, Length=210, Percent_Identity=32.3809523809524, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24657857, Length=255, Percent_Identity=29.8039215686275, Blast_Score=100, Evalue=9e-22,
Organism=Drosophila melanogaster, GI62484448, Length=255, Percent_Identity=29.8039215686275, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI62484274, Length=255, Percent_Identity=29.8039215686275, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI281365664, Length=255, Percent_Identity=29.8039215686275, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI18860517, Length=270, Percent_Identity=30, Blast_Score=98, Evalue=6e-21,
Organism=Drosophila melanogaster, GI28573263, Length=237, Percent_Identity=29.1139240506329, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI21356845, Length=186, Percent_Identity=28.494623655914, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI281361631, Length=194, Percent_Identity=29.3814432989691, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI281361633, Length=194, Percent_Identity=29.3814432989691, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 34933; Mature: 34933

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS01270 BAND_7

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIFLFAIGFILLATIVAGVKIINQGDEALVERLGRFHARLTPGLHIIIPYIDRLAFKET
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHH
IREQVLDIQPQTAITRDNVSLDADAVIYWRIVDVRKAYYSVANIRQAMSNLVLTALRSEI
HHHHHHCCCCCHHEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKLELDETFASRAEINQALLDQLDTATDPWGIKVTRVEVRNIAPSRTVLDSMEQQMAAER
CCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH
RKRAVILNSEGERQSAINSAQGEASARIARAEAERQEQILQAQGTAEALRTLAETLSDPK
HHCEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHH
AREALQFYLARNYLDVANAVGASPSSKVLFMDPASIPAALGALLSLADKSDEGDGQKTNG
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCC
APAILPPLHLRERPKVEG
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEIFLFAIGFILLATIVAGVKIINQGDEALVERLGRFHARLTPGLHIIIPYIDRLAFKET
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHH
IREQVLDIQPQTAITRDNVSLDADAVIYWRIVDVRKAYYSVANIRQAMSNLVLTALRSEI
HHHHHHCCCCCHHEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKLELDETFASRAEINQALLDQLDTATDPWGIKVTRVEVRNIAPSRTVLDSMEQQMAAER
CCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH
RKRAVILNSEGERQSAINSAQGEASARIARAEAERQEQILQAQGTAEALRTLAETLSDPK
HHCEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHH
AREALQFYLARNYLDVANAVGASPSSKVLFMDPASIPAALGALLSLADKSDEGDGQKTNG
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCC
APAILPPLHLRERPKVEG
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]