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The map label for this gene is ydfG [C]

Identifier: 37521723

GI number: 37521723

Start: 2305168

End: 2305908

Strand: Reverse

Name: ydfG [C]

Synonym: gll2154

Alternate gene names: 37521723

Gene position: 2305908-2305168 (Counterclockwise)

Preceding gene: 37521729

Following gene: 37521721

Centisome position: 49.49

GC content: 67.88

Gene sequence:

>741_bases
ATGGGGGTCAAACGGGTGGCGGTGGTGACGGGGGCGTCGGCGGGCATCGGTGCAGCGACCGCCCGGGTGTTGGCGGGCGA
GGGTTTTTCGGTCTACGGCGGTGCCCGGCGCGTCGAGCGGCTGGAAGCTTTGGCGCGGGAGGCGGGCTGTATTCCCCTGG
CCCTCGATGTCACCGACCCGGCGAGTGTCGATGCCTTCGCCGCCCACCTGCCCGATCGGGTGCATGTGCTGGTCAACAAC
GCCGGGGGGGCGCTGGGGCTCGACCGCATCGTCGAGATGGACGAGCAGCGGTGGCTTGCGATGTACCAGACAAATGTGCT
CGGGCTGGTGCGGGTGAGCAAAGCGCTTTTCGGCCGCCTTGAAGCCTCCGGTTCCGCCCATGTGGTCAATATCGGCAGCA
TCGCGGGCCTGGAAACTTACGTGGGAGGCGGCGGTTACACCGCCGTCAAGCACGCCGTGCGCGCCATCAACGACACGATG
CGCCTGGAGTGGGTGGGTAAACCGATTCGGGTGAGCGAGATCGATCCGGGGCTGGTGGAGACCGAATTTAGCCTGGTGCG
CTTCGCGGGGGACGCCGAGCGGGCCGGGGCGGTTTACGTCGGCATGCAGCCCTTGACGGCGGCGGATATCGCCGAGGCGG
TGCGCTGGGTGGTGAGCCTGCCGCCCCACGTCAATATCGATCAGATCGTCATCAAACCGCTCGCCCAGGCGCGCGCCGCG
CTCGTCCACCGGCAAAGCTGA

Upstream 100 bases:

>100_bases
CTCTTATGATGCATGCAATGACGGCCTACACTGTAGCATAAAACACCGGTACTCCCGGCGGGATACGACTATATCGCTGC
ACTATTTACAGGAGAGCGTC

Downstream 100 bases:

>100_bases
AGCAGATCAGACCTCGTTTTCGAGCACTTCGCGCACTTTCGCCAGTTCGAGCTTGCGCGCTTCGCTCACACTCGGGTAGT
GCAAATCCAGTTCGGCCAGC

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MGVKRVAVVTGASAGIGAATARVLAGEGFSVYGGARRVERLEALAREAGCIPLALDVTDPASVDAFAAHLPDRVHVLVNN
AGGALGLDRIVEMDEQRWLAMYQTNVLGLVRVSKALFGRLEASGSAHVVNIGSIAGLETYVGGGGYTAVKHAVRAINDTM
RLEWVGKPIRVSEIDPGLVETEFSLVRFAGDAERAGAVYVGMQPLTAADIAEAVRWVVSLPPHVNIDQIVIKPLAQARAA
LVHRQS

Sequences:

>Translated_246_residues
MGVKRVAVVTGASAGIGAATARVLAGEGFSVYGGARRVERLEALAREAGCIPLALDVTDPASVDAFAAHLPDRVHVLVNN
AGGALGLDRIVEMDEQRWLAMYQTNVLGLVRVSKALFGRLEASGSAHVVNIGSIAGLETYVGGGGYTAVKHAVRAINDTM
RLEWVGKPIRVSEIDPGLVETEFSLVRFAGDAERAGAVYVGMQPLTAADIAEAVRWVVSLPPHVNIDQIVIKPLAQARAA
LVHRQS
>Mature_245_residues
GVKRVAVVTGASAGIGAATARVLAGEGFSVYGGARRVERLEALAREAGCIPLALDVTDPASVDAFAAHLPDRVHVLVNNA
GGALGLDRIVEMDEQRWLAMYQTNVLGLVRVSKALFGRLEASGSAHVVNIGSIAGLETYVGGGGYTAVKHAVRAINDTMR
LEWVGKPIRVSEIDPGLVETEFSLVRFAGDAERAGAVYVGMQPLTAADIAEAVRWVVSLPPHVNIDQIVIKPLAQARAAL
VHRQS

Specific function: Unknown

COG id: COG4221

COG function: function code R; Short-chain alcohol dehydrogenase of unknown specificity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI109715829, Length=249, Percent_Identity=34.136546184739, Blast_Score=120, Evalue=1e-27,
Organism=Homo sapiens, GI20149619, Length=209, Percent_Identity=31.1004784688995, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI7706318, Length=206, Percent_Identity=32.0388349514563, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI19923817, Length=199, Percent_Identity=26.1306532663317, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI40548397, Length=189, Percent_Identity=30.1587301587302, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI214010158, Length=189, Percent_Identity=30.1587301587302, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI214010156, Length=189, Percent_Identity=30.1587301587302, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI22758144, Length=189, Percent_Identity=30.1587301587302, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI32483357, Length=192, Percent_Identity=30.2083333333333, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI7657478, Length=269, Percent_Identity=28.6245353159851, Blast_Score=65, Evalue=4e-11,
Organism=Escherichia coli, GI1787820, Length=247, Percent_Identity=40.080971659919, Blast_Score=160, Evalue=7e-41,
Organism=Escherichia coli, GI1787335, Length=198, Percent_Identity=31.8181818181818, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1786701, Length=193, Percent_Identity=30.0518134715026, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI87082100, Length=188, Percent_Identity=29.7872340425532, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17560676, Length=198, Percent_Identity=28.2828282828283, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17560332, Length=214, Percent_Identity=29.9065420560748, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17551412, Length=224, Percent_Identity=26.3392857142857, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17538480, Length=198, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17561402, Length=201, Percent_Identity=25.8706467661692, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17563726, Length=201, Percent_Identity=26.865671641791, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=254, Percent_Identity=38.5826771653543, Blast_Score=155, Evalue=4e-39,
Organism=Saccharomyces cerevisiae, GI6322067, Length=184, Percent_Identity=34.2391304347826, Blast_Score=79, Evalue=5e-16,
Organism=Drosophila melanogaster, GI116007236, Length=253, Percent_Identity=36.7588932806324, Blast_Score=119, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24641232, Length=253, Percent_Identity=34.3873517786561, Blast_Score=111, Evalue=4e-25,
Organism=Drosophila melanogaster, GI281364494, Length=251, Percent_Identity=33.8645418326693, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI28571387, Length=252, Percent_Identity=32.1428571428571, Blast_Score=101, Evalue=5e-22,
Organism=Drosophila melanogaster, GI24663911, Length=250, Percent_Identity=34, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24648693, Length=253, Percent_Identity=33.9920948616601, Blast_Score=97, Evalue=9e-21,
Organism=Drosophila melanogaster, GI21355889, Length=253, Percent_Identity=33.9920948616601, Blast_Score=97, Evalue=9e-21,
Organism=Drosophila melanogaster, GI24641388, Length=258, Percent_Identity=32.1705426356589, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI21358495, Length=214, Percent_Identity=31.7757009345794, Blast_Score=87, Evalue=9e-18,
Organism=Drosophila melanogaster, GI23397609, Length=226, Percent_Identity=31.858407079646, Blast_Score=84, Evalue=6e-17,
Organism=Drosophila melanogaster, GI116007234, Length=255, Percent_Identity=31.3725490196078, Blast_Score=84, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24643142, Length=181, Percent_Identity=33.1491712707182, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24648944, Length=245, Percent_Identity=30.6122448979592, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI116007238, Length=178, Percent_Identity=38.2022471910112, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21357041, Length=190, Percent_Identity=31.0526315789474, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28571526, Length=190, Percent_Identity=32.1052631578947, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI21355319, Length=225, Percent_Identity=25.7777777777778, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 25891; Mature: 25760

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVKRVAVVTGASAGIGAATARVLAGEGFSVYGGARRVERLEALAREAGCIPLALDVTDP
CCCCEEEEEECCCCCCCHHHHHHHCCCCCEECCHHHHHHHHHHHHHHCCCEEEEEECCCC
ASVDAFAAHLPDRVHVLVNNAGGALGLDRIVEMDEQRWLAMYQTNVLGLVRVSKALFGRL
CCHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
EASGSAHVVNIGSIAGLETYVGGGGYTAVKHAVRAINDTMRLEWVGKPIRVSEIDPGLVE
CCCCCEEEEEECCCCCHHHEECCCCHHHHHHHHHHHHHHEEEEECCCCEEEECCCCCCCH
TEFSLVRFAGDAERAGAVYVGMQPLTAADIAEAVRWVVSLPPHVNIDQIVIKPLAQARAA
HHHHEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LVHRQS
HHHCCC
>Mature Secondary Structure 
GVKRVAVVTGASAGIGAATARVLAGEGFSVYGGARRVERLEALAREAGCIPLALDVTDP
CCCEEEEEECCCCCCCHHHHHHHCCCCCEECCHHHHHHHHHHHHHHCCCEEEEEECCCC
ASVDAFAAHLPDRVHVLVNNAGGALGLDRIVEMDEQRWLAMYQTNVLGLVRVSKALFGRL
CCHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
EASGSAHVVNIGSIAGLETYVGGGGYTAVKHAVRAINDTMRLEWVGKPIRVSEIDPGLVE
CCCCCEEEEEECCCCCHHHEECCCCHHHHHHHHHHHHHHEEEEECCCCEEEECCCCCCCH
TEFSLVRFAGDAERAGAVYVGMQPLTAADIAEAVRWVVSLPPHVNIDQIVIKPLAQARAA
HHHHEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LVHRQS
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]