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The map label for this gene is ccmO [C]

Identifier: 37521660

GI number: 37521660

Start: 2244833

End: 2245570

Strand: Reverse

Name: ccmO [C]

Synonym: gvip284

Alternate gene names: 37521660

Gene position: 2245570-2244833 (Counterclockwise)

Preceding gene: 37521661

Following gene: 37521653

Centisome position: 48.2

GC content: 63.41

Gene sequence:

>738_bases
ATGATTGAGAGGATTGCCACGCCTTTGCCAGGGCGTGAGTCAGGACTTCTAATGGAAAGCGCCCTCGGTCTGGTTTCGAC
CTCCAGTTATCCCGCGATCGTCGGGACCGCCGACGCGATGCTCAAGTCCGCCGGGGTAATGCTGATAGGCTACGAAAAAG
TGGGCGGCGGGTACTGCACCGCTGTGGTGCGGGGCAAGACCTCCGATGTCCGCCTGGCCGTCGAGGCGGGGGTGCAGACG
GCCAAGGAGTTCGGTCAACTGGTCTCTTCTTCGATCATCCCCCGGCCCCTCGCCAACCTGGAGGCGGTGCTGCCCATCAA
CAGCCGCATCCCCCGCTACGCCCGCAAGCAGGCTTTCAGCCATTTCAGCAACCAGGCGATTGGCTTGTTGGAGACCCGTG
GATTTCCGGCGCTGGTGGGCGCGAGCAACACGATGCTGCGCGCCGCCGAGGTGCACCTTATCGGCTACGAAAAAATCGGC
GCCGGGCTGTGCACGGTGATCATCCAGGGCCACGTTGCCGATGTAATCTACGCCATCGATGCCGGGATGAAAGAAGCCGA
GCGCATCGGCGAACTGCACGCGGTCATGGTCATTCCCCGGCCCCTCGACGAACTGGAGCAATCGCTGCCCATCTCCCCGG
CGTTGCTCGAAGTGCCCGAGCCCCTGCTTCTGCCGAGCCTGGTGCGCCAGGAAGTGGGCGAATTGTTGGAGCTGCCCGCC
AAGACTCCCGAGCGTTAG

Upstream 100 bases:

>100_bases
TTCCGCGACCGGTGGAGGAGCGTAGGTTTGCCCATCCTTGGCCCTATGCACATCGTGCGAAACCGCCATTCCCTATCCGG
GTGGGCAAAACGGAGGAGCT

Downstream 100 bases:

>100_bases
TCGCTCTGGTGGGCGAAGCGGCGATAAAGAAAATCCAGGGCGTGGTTGCGCAGGTCGTAGTAGCGCGGGTCTTCCATGAT
GCGGGTGCGGTTGCGCGGCC

Product: carbon dioxide concentrating mechanism protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MIERIATPLPGRESGLLMESALGLVSTSSYPAIVGTADAMLKSAGVMLIGYEKVGGGYCTAVVRGKTSDVRLAVEAGVQT
AKEFGQLVSSSIIPRPLANLEAVLPINSRIPRYARKQAFSHFSNQAIGLLETRGFPALVGASNTMLRAAEVHLIGYEKIG
AGLCTVIIQGHVADVIYAIDAGMKEAERIGELHAVMVIPRPLDELEQSLPISPALLEVPEPLLLPSLVRQEVGELLELPA
KTPER

Sequences:

>Translated_245_residues
MIERIATPLPGRESGLLMESALGLVSTSSYPAIVGTADAMLKSAGVMLIGYEKVGGGYCTAVVRGKTSDVRLAVEAGVQT
AKEFGQLVSSSIIPRPLANLEAVLPINSRIPRYARKQAFSHFSNQAIGLLETRGFPALVGASNTMLRAAEVHLIGYEKIG
AGLCTVIIQGHVADVIYAIDAGMKEAERIGELHAVMVIPRPLDELEQSLPISPALLEVPEPLLLPSLVRQEVGELLELPA
KTPER
>Mature_245_residues
MIERIATPLPGRESGLLMESALGLVSTSSYPAIVGTADAMLKSAGVMLIGYEKVGGGYCTAVVRGKTSDVRLAVEAGVQT
AKEFGQLVSSSIIPRPLANLEAVLPINSRIPRYARKQAFSHFSNQAIGLLETRGFPALVGASNTMLRAAEVHLIGYEKIG
AGLCTVIIQGHVADVIYAIDAGMKEAERIGELHAVMVIPRPLDELEQSLPISPALLEVPEPLLLPSLVRQEVGELLELPA
KTPER

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=87, Percent_Identity=51.7241379310345, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 26055; Mature: 26055

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: PS01139 BACT_MICROCOMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIERIATPLPGRESGLLMESALGLVSTSSYPAIVGTADAMLKSAGVMLIGYEKVGGGYCT
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCEEEEEEEECCCEEEE
AVVRGKTSDVRLAVEAGVQTAKEFGQLVSSSIIPRPLANLEAVLPINSRIPRYARKQAFS
EEEECCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHH
HFSNQAIGLLETRGFPALVGASNTMLRAAEVHLIGYEKIGAGLCTVIIQGHVADVIYAID
HHCCCCEEEEECCCCCEEECCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
AGMKEAERIGELHAVMVIPRPLDELEQSLPISPALLEVPEPLLLPSLVRQEVGELLELPA
CCHHHHHHHCCEEEEEEECCCHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCC
KTPER
CCCCC
>Mature Secondary Structure
MIERIATPLPGRESGLLMESALGLVSTSSYPAIVGTADAMLKSAGVMLIGYEKVGGGYCT
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCEEEEEEEECCCEEEE
AVVRGKTSDVRLAVEAGVQTAKEFGQLVSSSIIPRPLANLEAVLPINSRIPRYARKQAFS
EEEECCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHH
HFSNQAIGLLETRGFPALVGASNTMLRAAEVHLIGYEKIGAGLCTVIIQGHVADVIYAID
HHCCCCEEEEECCCCCEEECCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
AGMKEAERIGELHAVMVIPRPLDELEQSLPISPALLEVPEPLLLPSLVRQEVGELLELPA
CCHHHHHHHCCEEEEEEECCCHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCC
KTPER
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]