| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37521647
Identifier: 37521647
GI number: 37521647
Start: 2229073
End: 2230560
Strand: Direct
Name: 37521647
Synonym: glr2078
Alternate gene names: NA
Gene position: 2229073-2230560 (Clockwise)
Preceding gene: 37521646
Following gene: 37521649
Centisome position: 47.84
GC content: 63.17
Gene sequence:
>1488_bases GTGGCAACCGTTTTGCAGGTTCCCATGCTTTGCCCATCGAGGCGCTCCCTTCCGGCGTTGTTGGCTTTGCTGGTGTTCGT TTTCGCCAACCCGCCATTGCTGTGGGCTGCGCCCACCCCTGCCGCCGTCCCGCCGCCCAAAACGCCAGCTCCCCTGCAAG CGACCCTTGAACTGCAGGCGAATCAGAACTACGGCCGACTGCCTGTCAGCTTCGAGCCCAACGTCGGCCAGACCGACGAG CGGGTGAAGTTCCTGGCGCGCGCCGGTGGCCACCGCGTCTTCTTGATGCCCGCCGAGGCCGTTTTCGTCCCGGGCAGCAG GCCGAAGCGCAATCTGCCCAAACTCGACGCCCGCCCGCAATCCGGCCCGACGCAGCTGGAGGCGTCCGGACCCGCTTCGG TGGTGCGCATGGAACTGGTGGGGGCCAATCGCGATGCGCTCATGGAGGGTTTGTCGCCGCTGCCCGGCAAGGTCAATTAC CTCAAAGGCAACAACCCGAAGCAATGGCGCACGAACATTGGCACCTACGGCCGGGTGCGGGTGCAGGCGGTCTACCGCGG CATCGATCTGGTCTACCACAGCGACAACGGCCGGCTGGAGTATGACTTCGTGGTGGCACCGGGGGCAAATCCGGGTCGGA TCCGCTTGCGTTTCGGCGGCGGGCAGAAGGTACTCATCGACAAAGACGGCGCCCTGGTGGTGAAGACGCAAGTGGGGGAG GTGCGCCAGCCCAGGCCCGTCGTCTATCAGCGGTTCGGCGCCGGACGCCGAGTGGTGCCGGGGCAGTACGTGCAGTCGAA CGACAAGACGGTGGGCTTCCAATTGGGCCGCTACGACCGCACTCGGCCGTTGGTGATCGACCCGACGCTGGCCTACTCCA CTTATCTAGGGGGCAATGACTATGATTTTGGCACTAGCATCGCGGTGGATGGGGCAGGCAACGCCTATGTGACCGGGTAC ACTTATTCCACCAACTTTCCGGCTGCCAACGCCCTGCAGCCCACAATCAAGGGCACCAACGATGTCTTCGTCAGCAAGTT GAACGCCTCGGGCAATGCCCTGGTCTACTCCACCTACCTGGGAGGCAGTGACGATGATGATTACACTGGCATCGCGGTGG ACGAGGCGGGCAATGCCTATGTCGAAGGGAACACTGCCTCCACCAACTTTCCGACCGCCAACGCCCTGCAGCTGACCAAC AAGGGCAAATCCGACGTCTTCGTCAGCAAGATAGACATCTCAAAACCGAACATCACCGGTTTCTCCCCGACTTCCGGAGC GATAGGCACCGCCGTCACCGTCACCGGCGTCGGCTTTGCCAATGCCACCCGCGTCGATTTCGCCAACCAGACGCCAGCCC CGTTCACCATCGTCTCCGACAACGAGATCGTCGCCACGGTCAACGCCGGTTCCAAGACCGGCAAGATCGTCGTCTTGGTG CCTAACGGCCGCACCTCCAGCCCCACCAAGTTCACCGTCACCCCCTAA
Upstream 100 bases:
>100_bases GTACTTGCGGTGTGCAAAAGCCGGTCCGACGTCGCCTTTCAAACAGTTGTGAAGTGTATTGAAGCCAACAGGTCAGTCCA CTTGCGGGGCTTACCATACG
Downstream 100 bases:
>100_bases AAAGTATCAATGGGTGATTCAGGCGCGAGTGCTCGCCGATTGCGCCTCGCCGCTCAGGCTGCGCCGCCTGAGTTGGCCGC AGGCCGCCGCTTCCTCTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 495; Mature: 494
Protein sequence:
>495_residues MATVLQVPMLCPSRRSLPALLALLVFVFANPPLLWAAPTPAAVPPPKTPAPLQATLELQANQNYGRLPVSFEPNVGQTDE RVKFLARAGGHRVFLMPAEAVFVPGSRPKRNLPKLDARPQSGPTQLEASGPASVVRMELVGANRDALMEGLSPLPGKVNY LKGNNPKQWRTNIGTYGRVRVQAVYRGIDLVYHSDNGRLEYDFVVAPGANPGRIRLRFGGGQKVLIDKDGALVVKTQVGE VRQPRPVVYQRFGAGRRVVPGQYVQSNDKTVGFQLGRYDRTRPLVIDPTLAYSTYLGGNDYDFGTSIAVDGAGNAYVTGY TYSTNFPAANALQPTIKGTNDVFVSKLNASGNALVYSTYLGGSDDDDYTGIAVDEAGNAYVEGNTASTNFPTANALQLTN KGKSDVFVSKIDISKPNITGFSPTSGAIGTAVTVTGVGFANATRVDFANQTPAPFTIVSDNEIVATVNAGSKTGKIVVLV PNGRTSSPTKFTVTP
Sequences:
>Translated_495_residues MATVLQVPMLCPSRRSLPALLALLVFVFANPPLLWAAPTPAAVPPPKTPAPLQATLELQANQNYGRLPVSFEPNVGQTDE RVKFLARAGGHRVFLMPAEAVFVPGSRPKRNLPKLDARPQSGPTQLEASGPASVVRMELVGANRDALMEGLSPLPGKVNY LKGNNPKQWRTNIGTYGRVRVQAVYRGIDLVYHSDNGRLEYDFVVAPGANPGRIRLRFGGGQKVLIDKDGALVVKTQVGE VRQPRPVVYQRFGAGRRVVPGQYVQSNDKTVGFQLGRYDRTRPLVIDPTLAYSTYLGGNDYDFGTSIAVDGAGNAYVTGY TYSTNFPAANALQPTIKGTNDVFVSKLNASGNALVYSTYLGGSDDDDYTGIAVDEAGNAYVEGNTASTNFPTANALQLTN KGKSDVFVSKIDISKPNITGFSPTSGAIGTAVTVTGVGFANATRVDFANQTPAPFTIVSDNEIVATVNAGSKTGKIVVLV PNGRTSSPTKFTVTP >Mature_494_residues ATVLQVPMLCPSRRSLPALLALLVFVFANPPLLWAAPTPAAVPPPKTPAPLQATLELQANQNYGRLPVSFEPNVGQTDER VKFLARAGGHRVFLMPAEAVFVPGSRPKRNLPKLDARPQSGPTQLEASGPASVVRMELVGANRDALMEGLSPLPGKVNYL KGNNPKQWRTNIGTYGRVRVQAVYRGIDLVYHSDNGRLEYDFVVAPGANPGRIRLRFGGGQKVLIDKDGALVVKTQVGEV RQPRPVVYQRFGAGRRVVPGQYVQSNDKTVGFQLGRYDRTRPLVIDPTLAYSTYLGGNDYDFGTSIAVDGAGNAYVTGYT YSTNFPAANALQPTIKGTNDVFVSKLNASGNALVYSTYLGGSDDDDYTGIAVDEAGNAYVEGNTASTNFPTANALQLTNK GKSDVFVSKIDISKPNITGFSPTSGAIGTAVTVTGVGFANATRVDFANQTPAPFTIVSDNEIVATVNAGSKTGKIVVLVP NGRTSSPTKFTVTP
Specific function: Unknown
COG id: COG3291
COG function: function code R; FOG: PKD repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52692; Mature: 52561
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVLQVPMLCPSRRSLPALLALLVFVFANPPLLWAAPTPAAVPPPKTPAPLQATLELQA CCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEE NQNYGRLPVSFEPNVGQTDERVKFLARAGGHRVFLMPAEAVFVPGSRPKRNLPKLDARPQ CCCCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCC SGPTQLEASGPASVVRMELVGANRDALMEGLSPLPGKVNYLKGNNPKQWRTNIGTYGRVR CCCCEEECCCCCEEEEEEEECCCHHHHHHCCCCCCCCEEEEECCCCCHHHHCCCCCCEEE VQAVYRGIDLVYHSDNGRLEYDFVVAPGANPGRIRLRFGGGQKVLIDKDGALVVKTQVGE EEEEECCEEEEEECCCCEEEEEEEECCCCCCCEEEEEECCCCEEEEECCCCEEEEEECCC VRQPRPVVYQRFGAGRRVVPGQYVQSNDKTVGFQLGRYDRTRPLVIDPTLAYSTYLGGND CCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCEEEEECCCCC YDFGTSIAVDGAGNAYVTGYTYSTNFPAANALQPTIKGTNDVFVSKLNASGNALVYSTYL CCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEC GGSDDDDYTGIAVDEAGNAYVEGNTASTNFPTANALQLTNKGKSDVFVSKIDISKPNITG CCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCC FSPTSGAIGTAVTVTGVGFANATRVDFANQTPAPFTIVSDNEIVATVNAGSKTGKIVVLV CCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCEEEEECCEEEEEEECCCCCCEEEEEE PNGRTSSPTKFTVTP CCCCCCCCEEEEECC >Mature Secondary Structure ATVLQVPMLCPSRRSLPALLALLVFVFANPPLLWAAPTPAAVPPPKTPAPLQATLELQA CCEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEE NQNYGRLPVSFEPNVGQTDERVKFLARAGGHRVFLMPAEAVFVPGSRPKRNLPKLDARPQ CCCCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCC SGPTQLEASGPASVVRMELVGANRDALMEGLSPLPGKVNYLKGNNPKQWRTNIGTYGRVR CCCCEEECCCCCEEEEEEEECCCHHHHHHCCCCCCCCEEEEECCCCCHHHHCCCCCCEEE VQAVYRGIDLVYHSDNGRLEYDFVVAPGANPGRIRLRFGGGQKVLIDKDGALVVKTQVGE EEEEECCEEEEEECCCCEEEEEEEECCCCCCCEEEEEECCCCEEEEECCCCEEEEEECCC VRQPRPVVYQRFGAGRRVVPGQYVQSNDKTVGFQLGRYDRTRPLVIDPTLAYSTYLGGND CCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCEEEEECCCCC YDFGTSIAVDGAGNAYVTGYTYSTNFPAANALQPTIKGTNDVFVSKLNASGNALVYSTYL CCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEC GGSDDDDYTGIAVDEAGNAYVEGNTASTNFPTANALQLTNKGKSDVFVSKIDISKPNITG CCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCC FSPTSGAIGTAVTVTGVGFANATRVDFANQTPAPFTIVSDNEIVATVNAGSKTGKIVVLV CCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCEEEEECCEEEEEEECCCCCCEEEEEE PNGRTSSPTKFTVTP CCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA