Click here to switch to the map view.

The map label for this gene is trpH [H]

Identifier: 37521617

GI number: 37521617

Start: 2197001

End: 2197810

Strand: Reverse

Name: trpH [H]

Synonym: gll2048

Alternate gene names: 37521617

Gene position: 2197810-2197001 (Counterclockwise)

Preceding gene: 37521619

Following gene: 37521616

Centisome position: 47.17

GC content: 67.9

Gene sequence:

>810_bases
ATGATCGAACTGCACTGTCACACGACTTGTTCCGACGGCACCCTGACGCCGAGTGAACTGGTGGCCTCGGCGGCGGCGGC
GGGGATCACAGCCCTGGCCATCACCGATCACGACACGCTCTCCGGCTGGCCCGAGGCGCACGAAGCCTGCCTCCGCCACG
GCCTGGAGCTGATCCCCGGTCTCGAACTCAGCACGGTCCACAACAGCAGTTCGCTGCATATTTTGGGCTTTTACCCGGAT
CCGGTGCAGCTGGCCCCCTTTTTGGAGGAGCGCCACGCCGCCCGGGTGCGCCGGGCGGGGCGTATCGTCGGGCGGCTGGC
CGAACTGGGCTATCCGATCGCGATGCCCTCGGTACCGACGCCGGGGCGCTTTCACATCGCAAGCGCCCTCAAGCAGGCGG
GCTACGTGAACGACGAACAAGATGCCTTTCGGCGCTGGCTGGGGGAGGGCAAACCCGCCTACGTCCCCTACGAGCACCTG
AGCGCCGAGGAAGGCATTCGCCGCCTGCGCGAGTGCGGCGCGGTGACGGTGTGGGCGCATCCGCTGTTGTTTCGGGGCGG
CAGTGTCGAGGAGGTGCTGCCGGCGCTCGCGGCAAGCGGCCTGCAGGGCATCGAGGTCTACCACAGCGAGCACACCCCCC
GCCAGAGCGCCCGCCTCGCCGAACTGGCCCGGCAGTGGGGTCTGGTGGTGACCGGCGGCAGCGATTTTCACGGCGACAAC
AAGTCCGGGGTCAGCCTCAACATGCTCCAATTGCCCTTGACCCTGCTGGATCCGATTAAACGCCTGGCCGGGGTGCCGGC
GGCGGTATAG

Upstream 100 bases:

>100_bases
AAGTTTTGCGGACAGATTTTACCACCGGCAAAGCGCGATTCGTCCTCGCCGGGTCGGCATCTGTTAGCTTGGAGGCGACA
CCTTGGCTGCCCCGAGCGCA

Downstream 100 bases:

>100_bases
CCATGCTTCAGACCAAACACACCAAGCTCATCGACATTTTTGCTTCCCTTGATCGGGTGCTGGTCGCCTACTCGGGTGGG
GTCGACAGCACCCTGGTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MIELHCHTTCSDGTLTPSELVASAAAAGITALAITDHDTLSGWPEAHEACLRHGLELIPGLELSTVHNSSSLHILGFYPD
PVQLAPFLEERHAARVRRAGRIVGRLAELGYPIAMPSVPTPGRFHIASALKQAGYVNDEQDAFRRWLGEGKPAYVPYEHL
SAEEGIRRLRECGAVTVWAHPLLFRGGSVEEVLPALAASGLQGIEVYHSEHTPRQSARLAELARQWGLVVTGGSDFHGDN
KSGVSLNMLQLPLTLLDPIKRLAGVPAAV

Sequences:

>Translated_269_residues
MIELHCHTTCSDGTLTPSELVASAAAAGITALAITDHDTLSGWPEAHEACLRHGLELIPGLELSTVHNSSSLHILGFYPD
PVQLAPFLEERHAARVRRAGRIVGRLAELGYPIAMPSVPTPGRFHIASALKQAGYVNDEQDAFRRWLGEGKPAYVPYEHL
SAEEGIRRLRECGAVTVWAHPLLFRGGSVEEVLPALAASGLQGIEVYHSEHTPRQSARLAELARQWGLVVTGGSDFHGDN
KSGVSLNMLQLPLTLLDPIKRLAGVPAAV
>Mature_269_residues
MIELHCHTTCSDGTLTPSELVASAAAAGITALAITDHDTLSGWPEAHEACLRHGLELIPGLELSTVHNSSSLHILGFYPD
PVQLAPFLEERHAARVRRAGRIVGRLAELGYPIAMPSVPTPGRFHIASALKQAGYVNDEQDAFRRWLGEGKPAYVPYEHL
SAEEGIRRLRECGAVTVWAHPLLFRGGSVEEVLPALAASGLQGIEVYHSEHTPRQSARLAELARQWGLVVTGGSDFHGDN
KSGVSLNMLQLPLTLLDPIKRLAGVPAAV

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=249, Percent_Identity=34.136546184739, Blast_Score=121, Evalue=5e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 28967; Mature: 28967

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIELHCHTTCSDGTLTPSELVASAAAAGITALAITDHDTLSGWPEAHEACLRHGLELIPG
CEEEEEECCCCCCCCCHHHHHHHHHHHCEEEEEEECCCCCCCCHHHHHHHHHCCHHHCCC
LELSTVHNSSSLHILGFYPDPVQLAPFLEERHAARVRRAGRIVGRLAELGYPIAMPSVPT
CEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCC
PGRFHIASALKQAGYVNDEQDAFRRWLGEGKPAYVPYEHLSAEEGIRRLRECGAVTVWAH
CCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHCCCEEEEHH
PLLFRGGSVEEVLPALAASGLQGIEVYHSEHTPRQSARLAELARQWGLVVTGGSDFHGDN
HHHCCCCCHHHHHHHHHHCCCCHHEEEECCCCCHHHHHHHHHHHHCCEEEECCCCCCCCC
KSGVSLNMLQLPLTLLDPIKRLAGVPAAV
CCCCEEEHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIELHCHTTCSDGTLTPSELVASAAAAGITALAITDHDTLSGWPEAHEACLRHGLELIPG
CEEEEEECCCCCCCCCHHHHHHHHHHHCEEEEEEECCCCCCCCHHHHHHHHHCCHHHCCC
LELSTVHNSSSLHILGFYPDPVQLAPFLEERHAARVRRAGRIVGRLAELGYPIAMPSVPT
CEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCC
PGRFHIASALKQAGYVNDEQDAFRRWLGEGKPAYVPYEHLSAEEGIRRLRECGAVTVWAH
CCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHCCCEEEEHH
PLLFRGGSVEEVLPALAASGLQGIEVYHSEHTPRQSARLAELARQWGLVVTGGSDFHGDN
HHHCCCCCHHHHHHHHHHCCCCHHEEEECCCCCHHHHHHHHHHHHCCEEEECCCCCCCCC
KSGVSLNMLQLPLTLLDPIKRLAGVPAAV
CCCCEEEHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]