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The map label for this gene is 37521573

Identifier: 37521573

GI number: 37521573

Start: 2152193

End: 2153800

Strand: Reverse

Name: 37521573

Synonym: gll2004

Alternate gene names: NA

Gene position: 2153800-2152193 (Counterclockwise)

Preceding gene: 37521574

Following gene: 37521572

Centisome position: 46.23

GC content: 68.28

Gene sequence:

>1608_bases
ATGATTCCGACCCTGGCGGCCGAACCCCGAAAACCGGCGCGCCCCCCGCTCCCGGTCCGGCGCGAGAGCCGGGAGGAACC
GGTCGACGCGGTGATCGTCGGCACCGGTGCCGGCGGAGCGCCGCTGCTTGCCCGACTCGCCCAGGCCGGCCTGAAAGTGG
TCGCCCTCGAAGCGGGAAACCACTGGGATCCGGCTGCGGACTTTGCCACCGACGAGCGCGAGCAAAACAAGCTTTTTTGG
TTCGACGAGCGGCTGAGCGCGGGCGCGGACCCGCTCGCCTTCGGGCGCAACAACTCGGGCATCGGCGTCGGCGGCTCGAC
CTTGCACTACACTGCCTACGTCCCGAGGCCGCAACCCGACGACTTTCGGCTTTATAGCGACTTCGGTGTCGGAGAGGACT
GGCCCATCGGCTACGGGGATCTCGAACCGTATTTCGACGAACTGGAATGCTTCCTGGGCGTCTCCGGCCCGTCGCCCTAC
CCGTGGGGACCGGCGCGGACGCCCTACCCGCTCGCCCCAATGCCGCTCAACGCCGCCGCCCAACTGATGGCGCGCGGCTG
TGCCGCCCTGGGCCTGCGCACCTCACCCGCCGCCAACGCCGTCCTTTCAGCCCCCTACTTCCAGTCCGGCGTGGGTTGGC
GCAGCCCGTGCACCAACCGCGGCTTCTGCCAGGCGGGCTGCACGACGGGGGGCAAGGCGGGCATGGATGTGACGTTTATT
CCCCTGGCCCTGGCCCACGGGGCCGAGGTGAGAAGCGGCGCTTTTGTGACCCGCATCGAGACCGACCGGGCGGGCCGGGT
CACGGGCGTCGTCTACGTCCGGGAGGGCCGGGAGGAGCGCCAGCGCTGTCGGACCCTTTTTTTGGCGGCCGGGGCCATTG
AGACACCGCGCCTGCTCTTGCTCAACGGGCTCGCCAACCAGAGCGGCGAGGTCGGCCGCAACTTTATGGCTCACCCCGGT
CTGCAGCTTTGGGGCCAATTTTCGGAGGCGACCCGGCCCTTCAAGGGCGTCCCCGGCAGCCTGATTTCAGAAGACACCCA
CCGCCCGAAGGACGCCGACTTTGCGGGCGGCTACTTGTTGCAGAGCATCGGCGTCATGCCCGTCACCTACGCGACCCAGA
CGGCGCGCGGGGGTGGGCTCTGGGGTGAGAAGCTCCAGTCGCACATGCACGGCTACAACCACACCGCCGGCATCAACATC
CTGGGCGAGTGCCTGCCCTACGCCCACAACTACCTCGAACTGTCGGACGAACCCGATCAGCGGGGTCTGCCCAAACCGCG
TATCCACTTCAGCAACGGCAAGAACGAGCGGCGCCTGCGCGACCACGCCGAAGCGCTCATGCGCCGCATCTGGGAAGCGG
CGGGGGCCCAGGCCGTCTGGACTTTCGAGCGCAACGCCCACACCATCGGCACCTGCCGGATGGGCGCCGACCCCAAGCGG
GCCGTAGTCGATCCGGAGGGCCGCGCCTTCGACGTACCGAACCTCTACATCATCGACAATTCGGTGTTCCCGAGTGCGCT
GAGCGTCAACCCGGCCCTCACGATCATGGCGCTCTCGCTGCGGACGGCCGATCGCTTTATCGAGCGCACCCAGCGCGGGG
AGTATTAA

Upstream 100 bases:

>100_bases
GTCGGAAATCGGCTACGCAGGAATGGCCGACGCGCGCGGGTGGCAGCGAATCGGCCTGGATGAGCGCGAAAGCTGGGAGC
CCGCGCCCGGCTCCCCGCCG

Downstream 100 bases:

>100_bases
GTGGCACAGAGTTTTCTCGACCTCATCCGGGCGCGCTACGGCGACGGCGACTATCCGGGGGATCAGTACGGTGGGGCGGA
CGGGGCGGACGGCCGCGGGC

Product: oxidoreductase

Products: NA

Alternate protein names: GA 2-DH dehydrogenase subunit; GADH dehydrogenase subunit [H]

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MIPTLAAEPRKPARPPLPVRRESREEPVDAVIVGTGAGGAPLLARLAQAGLKVVALEAGNHWDPAADFATDEREQNKLFW
FDERLSAGADPLAFGRNNSGIGVGGSTLHYTAYVPRPQPDDFRLYSDFGVGEDWPIGYGDLEPYFDELECFLGVSGPSPY
PWGPARTPYPLAPMPLNAAAQLMARGCAALGLRTSPAANAVLSAPYFQSGVGWRSPCTNRGFCQAGCTTGGKAGMDVTFI
PLALAHGAEVRSGAFVTRIETDRAGRVTGVVYVREGREERQRCRTLFLAAGAIETPRLLLLNGLANQSGEVGRNFMAHPG
LQLWGQFSEATRPFKGVPGSLISEDTHRPKDADFAGGYLLQSIGVMPVTYATQTARGGGLWGEKLQSHMHGYNHTAGINI
LGECLPYAHNYLELSDEPDQRGLPKPRIHFSNGKNERRLRDHAEALMRRIWEAAGAQAVWTFERNAHTIGTCRMGADPKR
AVVDPEGRAFDVPNLYIIDNSVFPSALSVNPALTIMALSLRTADRFIERTQRGEY

Sequences:

>Translated_535_residues
MIPTLAAEPRKPARPPLPVRRESREEPVDAVIVGTGAGGAPLLARLAQAGLKVVALEAGNHWDPAADFATDEREQNKLFW
FDERLSAGADPLAFGRNNSGIGVGGSTLHYTAYVPRPQPDDFRLYSDFGVGEDWPIGYGDLEPYFDELECFLGVSGPSPY
PWGPARTPYPLAPMPLNAAAQLMARGCAALGLRTSPAANAVLSAPYFQSGVGWRSPCTNRGFCQAGCTTGGKAGMDVTFI
PLALAHGAEVRSGAFVTRIETDRAGRVTGVVYVREGREERQRCRTLFLAAGAIETPRLLLLNGLANQSGEVGRNFMAHPG
LQLWGQFSEATRPFKGVPGSLISEDTHRPKDADFAGGYLLQSIGVMPVTYATQTARGGGLWGEKLQSHMHGYNHTAGINI
LGECLPYAHNYLELSDEPDQRGLPKPRIHFSNGKNERRLRDHAEALMRRIWEAAGAQAVWTFERNAHTIGTCRMGADPKR
AVVDPEGRAFDVPNLYIIDNSVFPSALSVNPALTIMALSLRTADRFIERTQRGEY
>Mature_535_residues
MIPTLAAEPRKPARPPLPVRRESREEPVDAVIVGTGAGGAPLLARLAQAGLKVVALEAGNHWDPAADFATDEREQNKLFW
FDERLSAGADPLAFGRNNSGIGVGGSTLHYTAYVPRPQPDDFRLYSDFGVGEDWPIGYGDLEPYFDELECFLGVSGPSPY
PWGPARTPYPLAPMPLNAAAQLMARGCAALGLRTSPAANAVLSAPYFQSGVGWRSPCTNRGFCQAGCTTGGKAGMDVTFI
PLALAHGAEVRSGAFVTRIETDRAGRVTGVVYVREGREERQRCRTLFLAAGAIETPRLLLLNGLANQSGEVGRNFMAHPG
LQLWGQFSEATRPFKGVPGSLISEDTHRPKDADFAGGYLLQSIGVMPVTYATQTARGGGLWGEKLQSHMHGYNHTAGINI
LGECLPYAHNYLELSDEPDQRGLPKPRIHFSNGKNERRLRDHAEALMRRIWEAAGAQAVWTFERNAHTIGTCRMGADPKR
AVVDPEGRAFDVPNLYIIDNSVFPSALSVNPALTIMALSLRTADRFIERTQRGEY

Specific function: Part of the heterotrimer that catalyzes the conversion of D-gluconate to 2-dehydro-D-gluconate. This subunit functions as the dehydrogenase [H]

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GMC oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000172
- InterPro:   IPR007867 [H]

Pfam domain/function: PF05199 GMC_oxred_C; PF00732 GMC_oxred_N [H]

EC number: =1.1.99.3 [H]

Molecular weight: Translated: 58106; Mature: 58106

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPTLAAEPRKPARPPLPVRRESREEPVDAVIVGTGAGGAPLLARLAQAGLKVVALEAGN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEECCC
HWDPAADFATDEREQNKLFWFDERLSAGADPLAFGRNNSGIGVGGSTLHYTAYVPRPQPD
CCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCC
DFRLYSDFGVGEDWPIGYGDLEPYFDELECFLGVSGPSPYPWGPARTPYPLAPMPLNAAA
CEEEEECCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCHHHHH
QLMARGCAALGLRTSPAANAVLSAPYFQSGVGWRSPCTNRGFCQAGCTTGGKAGMDVTFI
HHHHHHHHHHCCCCCCCCCCEEECCHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEE
PLALAHGAEVRSGAFVTRIETDRAGRVTGVVYVREGREERQRCRTLFLAAGAIETPRLLL
HHHHHCCCCCCCCEEEEEEECCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCEEE
LNGLANQSGEVGRNFMAHPGLQLWGQFSEATRPFKGVPGSLISEDTHRPKDADFAGGYLL
EECCCCCCCHHCCHHHCCCCHHHHHCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCHHHH
QSIGVMPVTYATQTARGGGLWGEKLQSHMHGYNHTAGINILGECLPYAHNYLELSDEPDQ
HHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEECCCCCCC
RGLPKPRIHFSNGKNERRLRDHAEALMRRIWEAAGAQAVWTFERNAHTIGTCRMGADPKR
CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCC
AVVDPEGRAFDVPNLYIIDNSVFPSALSVNPALTIMALSLRTADRFIERTQRGEY
EEECCCCCEECCCEEEEEECCCCCCCEECCCCEEEEEHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIPTLAAEPRKPARPPLPVRRESREEPVDAVIVGTGAGGAPLLARLAQAGLKVVALEAGN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEECCC
HWDPAADFATDEREQNKLFWFDERLSAGADPLAFGRNNSGIGVGGSTLHYTAYVPRPQPD
CCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCC
DFRLYSDFGVGEDWPIGYGDLEPYFDELECFLGVSGPSPYPWGPARTPYPLAPMPLNAAA
CEEEEECCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCHHHHH
QLMARGCAALGLRTSPAANAVLSAPYFQSGVGWRSPCTNRGFCQAGCTTGGKAGMDVTFI
HHHHHHHHHHCCCCCCCCCCEEECCHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEE
PLALAHGAEVRSGAFVTRIETDRAGRVTGVVYVREGREERQRCRTLFLAAGAIETPRLLL
HHHHHCCCCCCCCEEEEEEECCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCEEE
LNGLANQSGEVGRNFMAHPGLQLWGQFSEATRPFKGVPGSLISEDTHRPKDADFAGGYLL
EECCCCCCCHHCCHHHCCCCHHHHHCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCHHHH
QSIGVMPVTYATQTARGGGLWGEKLQSHMHGYNHTAGINILGECLPYAHNYLELSDEPDQ
HHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEECCCCCCC
RGLPKPRIHFSNGKNERRLRDHAEALMRRIWEAAGAQAVWTFERNAHTIGTCRMGADPKR
CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCC
AVVDPEGRAFDVPNLYIIDNSVFPSALSVNPALTIMALSLRTADRFIERTQRGEY
EEECCCCCEECCCEEEEEECCCCCCCEECCCCEEEEEHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9352901 [H]