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The map label for this gene is sodC [H]

Identifier: 37521550

GI number: 37521550

Start: 2129251

End: 2129952

Strand: Direct

Name: sodC [H]

Synonym: glr1981

Alternate gene names: 37521550

Gene position: 2129251-2129952 (Clockwise)

Preceding gene: 37521544

Following gene: 37521551

Centisome position: 45.7

GC content: 62.68

Gene sequence:

>702_bases
GTGGTCGTTTGCCGCTCGAAAGTCTCCGGCTTTAGCCTAGAGTCGTCAGGCTGCAATGGCAGCGAGGAAGCATCGATGAG
TAAGCATCTATTCGCCCTGGGAGCAGTTGGCTGGTTGCTGGCCGCACCGGCCCTGGCCGGCGAGCAACCGGCGGCTGTCT
CTGCAATCAAAGATCTCAATGGGCAGGTGGTGGGCACAGCCACCTTCCGCCAGCAACCGGAAGGCGTTCTGGTCAATATC
CAGGTGCAGGGACTACAGCCGGGCAAGCACGCCATGCACATCCACGCCGTCGGCAAGTGCGAACCGCCCGCCTTCAAGTC
CGCCGGTCCCCACCTGGGCGATGCGAAGATGGCGCCGACCTCCGGCACGCCCCACAGCCATGGTGCGAAAGGTGCCACTG
CATTGAGTATGAATCACGCTCACAGTGCCGGGTCGATGGCGTCGAGCATTCCCCATAACCATGGAGCCATGCACGCCGCG
ATGGCCGGGGATCTGCCGGATCTGGTCGTCGGCAGCGACGGCAGCGGCAAAGCCGAAATTCTGAATGCCGAGGTGCGCCT
CACCCCCGGCCGCAACTTTTTGTTGCAAAGCGAAGGAACGGCGCTGCTGATTCACGATGTCGCCGACCCCAATCAGCGCA
TCGCCTGCGGAGTGATCTCGAAGGCGCCGAATTCCTCCCCCGAAGCCAAGGTAAACCCGTGA

Upstream 100 bases:

>100_bases
CAGTTCAATGGCGACCGGCGGCATTAGGTGCTGGCCAGAATGCGGACAGGTCTGAGGTTTTCGAGGGATTTGGCGCCCGG
CCGCGGGAGCAGTTTGACAG

Downstream 100 bases:

>100_bases
ACAAACATAGACTCTGGATCCCAGCGCTGATGCTCCTCCTGGCAATGGCTGCAACCGGGCAGACCCACGAACTGAAGGCC
AACAAGCAGGTGGGGGCCTT

Product: superoxide dismutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MVVCRSKVSGFSLESSGCNGSEEASMSKHLFALGAVGWLLAAPALAGEQPAAVSAIKDLNGQVVGTATFRQQPEGVLVNI
QVQGLQPGKHAMHIHAVGKCEPPAFKSAGPHLGDAKMAPTSGTPHSHGAKGATALSMNHAHSAGSMASSIPHNHGAMHAA
MAGDLPDLVVGSDGSGKAEILNAEVRLTPGRNFLLQSEGTALLIHDVADPNQRIACGVISKAPNSSPEAKVNP

Sequences:

>Translated_233_residues
MVVCRSKVSGFSLESSGCNGSEEASMSKHLFALGAVGWLLAAPALAGEQPAAVSAIKDLNGQVVGTATFRQQPEGVLVNI
QVQGLQPGKHAMHIHAVGKCEPPAFKSAGPHLGDAKMAPTSGTPHSHGAKGATALSMNHAHSAGSMASSIPHNHGAMHAA
MAGDLPDLVVGSDGSGKAEILNAEVRLTPGRNFLLQSEGTALLIHDVADPNQRIACGVISKAPNSSPEAKVNP
>Mature_233_residues
MVVCRSKVSGFSLESSGCNGSEEASMSKHLFALGAVGWLLAAPALAGEQPAAVSAIKDLNGQVVGTATFRQQPEGVLVNI
QVQGLQPGKHAMHIHAVGKCEPPAFKSAGPHLGDAKMAPTSGTPHSHGAKGATALSMNHAHSAGSMASSIPHNHGAMHAA
MAGDLPDLVVGSDGSGKAEILNAEVRLTPGRNFLLQSEGTALLIHDVADPNQRIACGVISKAPNSSPEAKVNP

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems. May function against extracytoplasmic toxic oxygen species [H]

COG id: COG2032

COG function: function code P; Cu/Zn superoxide dismutase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cu-Zn superoxide dismutase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018152
- InterPro:   IPR001424 [H]

Pfam domain/function: PF00080 Sod_Cu [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 23672; Mature: 23672

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVCRSKVSGFSLESSGCNGSEEASMSKHLFALGAVGWLLAAPALAGEQPAAVSAIKDLN
CEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
GQVVGTATFRQQPEGVLVNIQVQGLQPGKHAMHIHAVGKCEPPAFKSAGPHLGDAKMAPT
CEEEEEEHHCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
SGTPHSHGAKGATALSMNHAHSAGSMASSIPHNHGAMHAAMAGDLPDLVVGSDGSGKAEI
CCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCEEHHHCCCCCCEEEECCCCCCEEE
LNAEVRLTPGRNFLLQSEGTALLIHDVADPNQRIACGVISKAPNSSPEAKVNP
EEEEEEECCCCCEEEECCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MVVCRSKVSGFSLESSGCNGSEEASMSKHLFALGAVGWLLAAPALAGEQPAAVSAIKDLN
CEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
GQVVGTATFRQQPEGVLVNIQVQGLQPGKHAMHIHAVGKCEPPAFKSAGPHLGDAKMAPT
CEEEEEEHHCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
SGTPHSHGAKGATALSMNHAHSAGSMASSIPHNHGAMHAAMAGDLPDLVVGSDGSGKAEI
CCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCEEHHHCCCCCCEEEECCCCCCEEE
LNAEVRLTPGRNFLLQSEGTALLIHDVADPNQRIACGVISKAPNSSPEAKVNP
EEEEEEECCCCCEEEECCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2345128; 11259647; 7050107 [H]