| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is btuB [H]
Identifier: 37521542
GI number: 37521542
Start: 2119165
End: 2121408
Strand: Direct
Name: btuB [H]
Synonym: glr1973
Alternate gene names: 37521542
Gene position: 2119165-2121408 (Clockwise)
Preceding gene: 37521539
Following gene: 37521543
Centisome position: 45.49
GC content: 63.15
Gene sequence:
>2244_bases GTGTATGCTTACAGCACAATCGAATGGCTTTGGGAGCCCGGGGGATCAGCCCGGGCTGAAAGGGGAAAGTCCGGTGCGAG TCCGGCGCTGTGCCGCAGCTGTGATGGCTTGAGAGCAAGCCTCAGTCAGAATGCCCGTCCCACAAAAGCCGCATTCCACT CGACCCGCGTCGCACGGGGAAGGAGTATTTTTGTGCGTGGCATTGTCTTGGTGCCCCTGGCAGTCTGGCTATTGACATGG CCGGCCGGGGCGGAACGTGTGCAGGATTTTCGTCCCCAGGCCGCCCCGGGGGCAAAGGATCTGTTGGCCCAGGAGGTACC GGGGGCGCCCAGGCCACTCGAAGGCTTCGCCGATACCCGGCTCAACCAACCGCTTTATGCCCCGTTTCGCCGCGAAGGGA CGCTCAAAGAAGCGAGCCGTCCCGCCTACGTGATCACCCGCCGGCAGATCGAAGCGCAGGGGGCACGCACGGTGCAGGAG GCGCTCCGTTACCTGCCCGGAATTCTTAGCGACGGCACCGCCGGCACGCAACTGGGAACCCTCAGCTCCCAGTTCATCCG CGGCTCCAACAGTTCCCAGGTGCTCGTGCTGCTCGACGGCAGACCGCTCAACGACCTGGGCTTCTTCGGCGGCTACGACC TGTCGGAATTGACCACCGATACGGTGGAGCGTGTCGAGGTGGTGCCCGGCGGCGGTTCGACCCTCTACGGCTCCGACGCG GTGGGAGGAGTGATCAACATCGTCAGCCGCGCCCCATCCGAGCGGCCGAGCACGACCCTCAAAGCCTCTGCGGGCAGCTT CGCTCTCAACGAGCAAAGCCTGCAGACCAGCGGTCGCAGCGGGGCGGTCGGTTGGCGCGTCGACTACAACCGCCTGCAGG CGAACAACAACTTTCCCTTCGAGATCGCCTCGGTGGGTTATGCCGGGACGCGCGAGAACGCCGACGTTACTTATAACAAC TTCAGCGCCCGGCTGGAAGCGGATCTAAGCGAACGGACGGCACTCAGTGCAAGCGTCCTTTCGCAAAACAAAGACCTGGG GGTGCCGGGCGGGGTGCCTATCCCGATACCGGGCAGTGTCGGCCAGTTCAACACCCTCACCACCGACACCCGCCAGTTCA CCAACAACTGGCTTGCGGATCTGGGTCTGCGTGCCAAGCTCGGGCTGGGCGAAGATTCGCTGCTCACCGCGAGACTCTTT GCCGATTTTCTCAACTACCGCTACGACGCACCGCTAAGCCAGGGTTCGCGCGACGAGATCCGCCGCCGCTCCTGGGGGGC GCAAGTGCAGCACACCTGGCGGGTGAGCCCCGAGCACCACCTCACCTACGGTCTGGATTACCGCACCGTCTCGGCCTTCA ACTCGACGTACCTCTATCCGCTGGCTGCCACCAACATCAACTACGACGGCCAGGTGGGCCAGGGAGCGCTCTTCGTGCGC GACGAAATCGCCCTGGGCGAAGATCTCAAGCTCAACCTCGGGCTGCGCCAGGACATCAGCGGCCTGGCCAAAGGCTCGTT CACTTCTCCCAGTGCCGGGGTGCGCTGGCAGGTGGGCGAGGACATGGCATTGCGGGCCAATTACGCCCGCAGCTTCCGCG CGCCGCTGCTGTCGGATCTCTATTTCAAGTTGCGGGGCTTTTTCACCGTCGACGGCAACCCGGACCTCAGACCCGAGCAG GGCGACAGCTACGACATCGGCATCGATCAAAAAATCGGCGAGGCCGCCCTGGTGCGCCTCACCTACTTCGCCAACACCGT GGCAGATACCATCGCCTTTACTTTTACAGGCCCCACCTCGGGTTCCTACGCCAACCTCGGCCTGGTACGCAGCACCGGCA TCGAGGCGAGCATCGAGGTGCGACTGGCGCCTTCGTGGTACCTCTCAGTCAATTTCACAGGCACCGAACCGCGCATCCTC GCTGATGCCAACCCGGCCTACGTGGGCAAGGAATTGAGCTTTCGTGGGGCTGACAGCTTCAACGCCTCGCTCGCCTACGA GTCAACAGGAGGCTGGTTCGCGGGTCTGTTTGTGCACAGCGTCGGCCGGTTTTTCACCGACAACGCCAACACCGAAGCCC TGGGCGGTTACACGACCACCGACTTGAAGCTGCGCTTGCCGCTCACCGACAACTTGAACTTTAACGCCCAAGTGAACAAC CTATTCAACCAGCAGTACCAGGTCTACCCGGGCTATCCGGGCGTGGGGATCAACTTTCGCACCGGCTTGAGCTGGACGAT TTGA
Upstream 100 bases:
>100_bases CTTTGCTGCAGCCGTCCAGCCTTTGTCCCGGAGGAAGAATTCTTAAACAACAGCGCAATAAGACGTACAATTGTCGATTG TCGGCCGGGGTCGCGACCTG
Downstream 100 bases:
>100_bases GGAGCGACGATGAGCACCGCATTTGAACGCCGCGTCCAACCGCTGGGACGCACGACCTACGAAAGCCAGCCTTCCGGCTG GACGCACGAGTACGAAGACT
Product: hypothetical protein
Products: NA
Alternate protein names: Cobalamin receptor; Outer membrane cobalamin translocator [H]
Number of amino acids: Translated: 747; Mature: 747
Protein sequence:
>747_residues MYAYSTIEWLWEPGGSARAERGKSGASPALCRSCDGLRASLSQNARPTKAAFHSTRVARGRSIFVRGIVLVPLAVWLLTW PAGAERVQDFRPQAAPGAKDLLAQEVPGAPRPLEGFADTRLNQPLYAPFRREGTLKEASRPAYVITRRQIEAQGARTVQE ALRYLPGILSDGTAGTQLGTLSSQFIRGSNSSQVLVLLDGRPLNDLGFFGGYDLSELTTDTVERVEVVPGGGSTLYGSDA VGGVINIVSRAPSERPSTTLKASAGSFALNEQSLQTSGRSGAVGWRVDYNRLQANNNFPFEIASVGYAGTRENADVTYNN FSARLEADLSERTALSASVLSQNKDLGVPGGVPIPIPGSVGQFNTLTTDTRQFTNNWLADLGLRAKLGLGEDSLLTARLF ADFLNYRYDAPLSQGSRDEIRRRSWGAQVQHTWRVSPEHHLTYGLDYRTVSAFNSTYLYPLAATNINYDGQVGQGALFVR DEIALGEDLKLNLGLRQDISGLAKGSFTSPSAGVRWQVGEDMALRANYARSFRAPLLSDLYFKLRGFFTVDGNPDLRPEQ GDSYDIGIDQKIGEAALVRLTYFANTVADTIAFTFTGPTSGSYANLGLVRSTGIEASIEVRLAPSWYLSVNFTGTEPRIL ADANPAYVGKELSFRGADSFNASLAYESTGGWFAGLFVHSVGRFFTDNANTEALGGYTTTDLKLRLPLTDNLNFNAQVNN LFNQQYQVYPGYPGVGINFRTGLSWTI
Sequences:
>Translated_747_residues MYAYSTIEWLWEPGGSARAERGKSGASPALCRSCDGLRASLSQNARPTKAAFHSTRVARGRSIFVRGIVLVPLAVWLLTW PAGAERVQDFRPQAAPGAKDLLAQEVPGAPRPLEGFADTRLNQPLYAPFRREGTLKEASRPAYVITRRQIEAQGARTVQE ALRYLPGILSDGTAGTQLGTLSSQFIRGSNSSQVLVLLDGRPLNDLGFFGGYDLSELTTDTVERVEVVPGGGSTLYGSDA VGGVINIVSRAPSERPSTTLKASAGSFALNEQSLQTSGRSGAVGWRVDYNRLQANNNFPFEIASVGYAGTRENADVTYNN FSARLEADLSERTALSASVLSQNKDLGVPGGVPIPIPGSVGQFNTLTTDTRQFTNNWLADLGLRAKLGLGEDSLLTARLF ADFLNYRYDAPLSQGSRDEIRRRSWGAQVQHTWRVSPEHHLTYGLDYRTVSAFNSTYLYPLAATNINYDGQVGQGALFVR DEIALGEDLKLNLGLRQDISGLAKGSFTSPSAGVRWQVGEDMALRANYARSFRAPLLSDLYFKLRGFFTVDGNPDLRPEQ GDSYDIGIDQKIGEAALVRLTYFANTVADTIAFTFTGPTSGSYANLGLVRSTGIEASIEVRLAPSWYLSVNFTGTEPRIL ADANPAYVGKELSFRGADSFNASLAYESTGGWFAGLFVHSVGRFFTDNANTEALGGYTTTDLKLRLPLTDNLNFNAQVNN LFNQQYQVYPGYPGVGINFRTGLSWTI >Mature_747_residues MYAYSTIEWLWEPGGSARAERGKSGASPALCRSCDGLRASLSQNARPTKAAFHSTRVARGRSIFVRGIVLVPLAVWLLTW PAGAERVQDFRPQAAPGAKDLLAQEVPGAPRPLEGFADTRLNQPLYAPFRREGTLKEASRPAYVITRRQIEAQGARTVQE ALRYLPGILSDGTAGTQLGTLSSQFIRGSNSSQVLVLLDGRPLNDLGFFGGYDLSELTTDTVERVEVVPGGGSTLYGSDA VGGVINIVSRAPSERPSTTLKASAGSFALNEQSLQTSGRSGAVGWRVDYNRLQANNNFPFEIASVGYAGTRENADVTYNN FSARLEADLSERTALSASVLSQNKDLGVPGGVPIPIPGSVGQFNTLTTDTRQFTNNWLADLGLRAKLGLGEDSLLTARLF ADFLNYRYDAPLSQGSRDEIRRRSWGAQVQHTWRVSPEHHLTYGLDYRTVSAFNSTYLYPLAATNINYDGQVGQGALFVR DEIALGEDLKLNLGLRQDISGLAKGSFTSPSAGVRWQVGEDMALRANYARSFRAPLLSDLYFKLRGFFTVDGNPDLRPEQ GDSYDIGIDQKIGEAALVRLTYFANTVADTIAFTFTGPTSGSYANLGLVRSTGIEASIEVRLAPSWYLSVNFTGTEPRIL ADANPAYVGKELSFRGADSFNASLAYESTGGWFAGLFVHSVGRFFTDNANTEALGGYTTTDLKLRLPLTDNLNFNAQVNN LFNQQYQVYPGYPGVGINFRTGLSWTI
Specific function: Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TonB-dependent receptor family. BtuB (TC 1.B.14.3.1) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790405, Length=632, Percent_Identity=26.1075949367089, Blast_Score=131, Evalue=1e-31, Organism=Escherichia coli, GI1788478, Length=282, Percent_Identity=26.5957446808511, Blast_Score=78, Evalue=2e-15,
Paralogues:
None
Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010101 - InterPro: IPR010916 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 81132; Mature: 81132
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYAYSTIEWLWEPGGSARAERGKSGASPALCRSCDGLRASLSQNARPTKAAFHSTRVARG CCCCCEEHEEECCCCCCHHHCCCCCCCHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHCC RSIFVRGIVLVPLAVWLLTWPAGAERVQDFRPQAAPGAKDLLAQEVPGAPRPLEGFADTR CEEEEHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHH LNQPLYAPFRREGTLKEASRPAYVITRRQIEAQGARTVQEALRYLPGILSDGTAGTQLGT CCCCCCCCCCCCCCHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH LSSQFIRGSNSSQVLVLLDGRPLNDLGFFGGYDLSELTTDTVERVEVVPGGGSTLYGSDA HHHHHHCCCCCCEEEEEECCCCCHHHCCCCCCCHHHHHHHHHHEEEEECCCCCEECCCCH VGGVINIVSRAPSERPSTTLKASAGSFALNEQSLQTSGRSGAVGWRVDYNRLQANNNFPF HHHHHHHHHCCCCCCCCCEEEECCCCEEECHHHHHCCCCCCCEEEEEEHHHEECCCCCCE EIASVGYAGTRENADVTYNNFSARLEADLSERTALSASVLSQNKDLGVPGGVPIPIPGSV EEEECCCCCCCCCCCEEECCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC GQFNTLTTDTRQFTNNWLADLGLRAKLGLGEDSLLTARLFADFLNYRYDAPLSQGSRDEI CCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHH RRRSWGAQVQHTWRVSPEHHLTYGLDYRTVSAFNSTYLYPLAATNINYDGQVGQGALFVR HHHHCCCCEEEEEECCCCCCEEEECCEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEE DEIALGEDLKLNLGLRQDISGLAKGSFTSPSAGVRWQVGEDMALRANYARSFRAPLLSDL ECCCCCCCEEEECCCHHHHHHHHCCCCCCCCCCEEEECCCCEEEHHHHHHHHCCHHHHHH YFKLRGFFTVDGNPDLRPEQGDSYDIGIDQKIGEAALVRLTYFANTVADTIAFTFTGPTS HHHEEEEEEECCCCCCCCCCCCCEECCCCCCCCHHHHEEHHHHHHHHHHEEEEEEECCCC GSYANLGLVRSTGIEASIEVRLAPSWYLSVNFTGTEPRILADANPAYVGKELSFRGADSF CCEEEEEEEEECCCCEEEEEEECCCEEEEEEECCCCCEEEECCCCCCCCCEEEECCCCCC NASLAYESTGGWFAGLFVHSVGRFFTDNANTEALGGYTTTDLKLRLPLTDNLNFNAQVNN CCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEHHH LFNQQYQVYPGYPGVGINFRTGLSWTI HCCCCEEEECCCCCCCEEEECCCEECC >Mature Secondary Structure MYAYSTIEWLWEPGGSARAERGKSGASPALCRSCDGLRASLSQNARPTKAAFHSTRVARG CCCCCEEHEEECCCCCCHHHCCCCCCCHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHCC RSIFVRGIVLVPLAVWLLTWPAGAERVQDFRPQAAPGAKDLLAQEVPGAPRPLEGFADTR CEEEEHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHH LNQPLYAPFRREGTLKEASRPAYVITRRQIEAQGARTVQEALRYLPGILSDGTAGTQLGT CCCCCCCCCCCCCCHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH LSSQFIRGSNSSQVLVLLDGRPLNDLGFFGGYDLSELTTDTVERVEVVPGGGSTLYGSDA HHHHHHCCCCCCEEEEEECCCCCHHHCCCCCCCHHHHHHHHHHEEEEECCCCCEECCCCH VGGVINIVSRAPSERPSTTLKASAGSFALNEQSLQTSGRSGAVGWRVDYNRLQANNNFPF HHHHHHHHHCCCCCCCCCEEEECCCCEEECHHHHHCCCCCCCEEEEEEHHHEECCCCCCE EIASVGYAGTRENADVTYNNFSARLEADLSERTALSASVLSQNKDLGVPGGVPIPIPGSV EEEECCCCCCCCCCCEEECCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC GQFNTLTTDTRQFTNNWLADLGLRAKLGLGEDSLLTARLFADFLNYRYDAPLSQGSRDEI CCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHH RRRSWGAQVQHTWRVSPEHHLTYGLDYRTVSAFNSTYLYPLAATNINYDGQVGQGALFVR HHHHCCCCEEEEEECCCCCCEEEECCEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEE DEIALGEDLKLNLGLRQDISGLAKGSFTSPSAGVRWQVGEDMALRANYARSFRAPLLSDL ECCCCCCCEEEECCCHHHHHHHHCCCCCCCCCCEEEECCCCEEEHHHHHHHHCCHHHHHH YFKLRGFFTVDGNPDLRPEQGDSYDIGIDQKIGEAALVRLTYFANTVADTIAFTFTGPTS HHHEEEEEEECCCCCCCCCCCCCEECCCCCCCCHHHHEEHHHHHHHHHHEEEEEEECCCC GSYANLGLVRSTGIEASIEVRLAPSWYLSVNFTGTEPRILADANPAYVGKELSFRGADSF CCEEEEEEEEECCCCEEEEEEECCCEEEEEEECCCCCEEEECCCCCCCCCEEEECCCCCC NASLAYESTGGWFAGLFVHSVGRFFTDNANTEALGGYTTTDLKLRLPLTDNLNFNAQVNN CCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEHHH LFNQQYQVYPGYPGVGINFRTGLSWTI HCCCCEEEECCCCCCCEEEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 14528314 [H]