Click here to switch to the map view.

The map label for this gene is psbX

Identifier: 37521443

GI number: 37521443

Start: 1993326

End: 1993436

Strand: Direct

Name: psbX

Synonym: gvip259

Alternate gene names: 37521443

Gene position: 1993326-1993436 (Clockwise)

Preceding gene: 37521440

Following gene: 37521445

Centisome position: 42.78

GC content: 65.77

Gene sequence:

>111_bases
ATGACCGCGACGCTGAGCAACTTTTTGTGGAGCATCTTCTGGGGGGGCGTGGTGGTTGCCCTCGGTGCCGCCGCCCTCAC
CGCCATCTCCCGCATCGACCGCATCCGCTAG

Upstream 100 bases:

>100_bases
CCACCTTATTTTTAACAGCTTCGTCACATCGGGCAACAAAAAGGTACAATCTACACTACTGTGACTTCGTCAAGCACACG
TCCCCTTTGGAGAACCGTCC

Downstream 100 bases:

>100_bases
AGCCGGGCGATGCTGCGGGCCGGCGGCTGCGGCGGCCGGATGATGTCGCATCGGGGCATGAGCACCTGCGAGAAGGTGCC
GTCCGCCTGATGCTCGAAGG

Product: photosystem II protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 36; Mature: 35

Protein sequence:

>36_residues
MTATLSNFLWSIFWGGVVVALGAAALTAISRIDRIR

Sequences:

>Translated_36_residues
MTATLSNFLWSIFWGGVVVALGAAALTAISRIDRIR
>Mature_35_residues
TATLSNFLWSIFWGGVVVALGAAALTAISRIDRIR

Specific function: Involved in the binding and/or turnover of quinones at the Q(B) site of Photosystem II

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbX family. Type 1 subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBX_GLOVI (Q7NJF8)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_924820.1
- GeneID:   2600276
- GenomeReviews:   BA000045_GR
- NMPDR:   fig|251221.1.peg.1874
- BioCyc:   GVIO251221:GSR1874-MONOMER
- GO:   GO:0015979
- HAMAP:   MF_01386
- InterPro:   IPR009518

Pfam domain/function: PF06596 PsbX

EC number: NA

Molecular weight: Translated: 3879; Mature: 3747

Theoretical pI: Translated: 12.20; Mature: 12.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x135bce90)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATLSNFLWSIFWGGVVVALGAAALTAISRIDRIR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure 
TATLSNFLWSIFWGGVVVALGAAALTAISRIDRIR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14621292