| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37521426
Identifier: 37521426
GI number: 37521426
Start: 1979113
End: 1979838
Strand: Direct
Name: 37521426
Synonym: glr1857
Alternate gene names: NA
Gene position: 1979113-1979838 (Clockwise)
Preceding gene: 37521425
Following gene: 37521427
Centisome position: 42.48
GC content: 61.71
Gene sequence:
>726_bases ATGCCCAAAGACGCGATCGGTATATTGATAGACCTGGCCCGGCGGGGTGAAATCGATCCGTGGGATATCGACGTGGTGCA GTTGACCGATCGCTTCTTGCAATCGCTCGGCAGCCTCGACGTTTCGGACCTGCCCCGCTCGGGCCAGGCGCTTTTTTATG CTTCGGTGCTGGTGCACATGAAGGCGGAGATCCTCGAAGGATCGATGCAATCGCCCGATCCGCTCGACGTGCCGGAGGAT GAAGAAGAGGCGCTGTCGCACCCACTGGGCCCCAACGGACCGGCGGTGGCCCTCGAGCGCCTGATCCGCCGCCGTCCGGC GGTGCCTGCGATGGTCGATCGGCCCCTGACCCTCAATGATCTGATTGCCCATCTGCGCGAAGTCGAGCAAATGGAGGGCC ACCAGGCCCAAAAGCGCACCGCCGAGCGCCGCCCACCCCTCAAAGGTCCGATGGTGCGCACCATGGAGCAAGTCGAGCAT CTGGCCCACCAGGAGAACCTCGAAGCGATCGTGACCGGATTGTGGGCGGTGCTCACCACCAAAGGCGTCACCGCCTTCGA AAAATTGTTAGAACACTACCGGGATCGCGTGGGAGCGTTTCTGGGTTTGCTGTTTCTGGCGCACCGCGACCGGGTGGTGC TCGCCCAAGCCGAATTTTACAGAGACATCGAGATCTATGCCGTCGACGAATCTCAAGACCCGCCTGGAGGCGGTGCTCTA CCTTAA
Upstream 100 bases:
>100_bases CGAAGATGGACGTCATCCAATTTTCTGAGCGCGAACTCTAGAGATCGGCACGGGGTTTTGCGGGTGCTATTCTTGATGGC AATCGGCCCTGGCACTCCGT
Downstream 100 bases:
>100_bases AGCGCGTCCGCTGAACCTTGAACAGCTCAGCCGCTACGCGGAGTGCGATCGGGACGATTGCCGCGAGGCGTTGCTTGAGC TGCTCGAGGATTATGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Segregation And Condensation Protein A; Condensin Subunit ScpA; Smc Operon Protein; ScpA/B Protein; Condensin Subunit Scpa; Segregation And Condensation Protein ScpA
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MPKDAIGILIDLARRGEIDPWDIDVVQLTDRFLQSLGSLDVSDLPRSGQALFYASVLVHMKAEILEGSMQSPDPLDVPED EEEALSHPLGPNGPAVALERLIRRRPAVPAMVDRPLTLNDLIAHLREVEQMEGHQAQKRTAERRPPLKGPMVRTMEQVEH LAHQENLEAIVTGLWAVLTTKGVTAFEKLLEHYRDRVGAFLGLLFLAHRDRVVLAQAEFYRDIEIYAVDESQDPPGGGAL P
Sequences:
>Translated_241_residues MPKDAIGILIDLARRGEIDPWDIDVVQLTDRFLQSLGSLDVSDLPRSGQALFYASVLVHMKAEILEGSMQSPDPLDVPED EEEALSHPLGPNGPAVALERLIRRRPAVPAMVDRPLTLNDLIAHLREVEQMEGHQAQKRTAERRPPLKGPMVRTMEQVEH LAHQENLEAIVTGLWAVLTTKGVTAFEKLLEHYRDRVGAFLGLLFLAHRDRVVLAQAEFYRDIEIYAVDESQDPPGGGAL P >Mature_240_residues PKDAIGILIDLARRGEIDPWDIDVVQLTDRFLQSLGSLDVSDLPRSGQALFYASVLVHMKAEILEGSMQSPDPLDVPEDE EEALSHPLGPNGPAVALERLIRRRPAVPAMVDRPLTLNDLIAHLREVEQMEGHQAQKRTAERRPPLKGPMVRTMEQVEHL AHQENLEAIVTGLWAVLTTKGVTAFEKLLEHYRDRVGAFLGLLFLAHRDRVVLAQAEFYRDIEIYAVDESQDPPGGGALP
Specific function: Unknown
COG id: COG1354
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26851; Mature: 26720
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKDAIGILIDLARRGEIDPWDIDVVQLTDRFLQSLGSLDVSDLPRSGQALFYASVLVHM CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHH KAEILEGSMQSPDPLDVPEDEEEALSHPLGPNGPAVALERLIRRRPAVPAMVDRPLTLND HHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCHHH LIAHLREVEQMEGHQAQKRTAERRPPLKGPMVRTMEQVEHLAHQENLEAIVTGLWAVLTT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGVTAFEKLLEHYRDRVGAFLGLLFLAHRDRVVLAQAEFYRDIEIYAVDESQDPPGGGAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHCEEEEEECCCCCCCCCCCC P C >Mature Secondary Structure PKDAIGILIDLARRGEIDPWDIDVVQLTDRFLQSLGSLDVSDLPRSGQALFYASVLVHM CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHH KAEILEGSMQSPDPLDVPEDEEEALSHPLGPNGPAVALERLIRRRPAVPAMVDRPLTLND HHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCHHH LIAHLREVEQMEGHQAQKRTAERRPPLKGPMVRTMEQVEHLAHQENLEAIVTGLWAVLTT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGVTAFEKLLEHYRDRVGAFLGLLFLAHRDRVVLAQAEFYRDIEIYAVDESQDPPGGGAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHCEEEEEECCCCCCCCCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA