| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37521407
Identifier: 37521407
GI number: 37521407
Start: 1957346
End: 1957771
Strand: Direct
Name: 37521407
Synonym: glr1838
Alternate gene names: NA
Gene position: 1957346-1957771 (Clockwise)
Preceding gene: 37521406
Following gene: 37521408
Centisome position: 42.01
GC content: 49.3
Gene sequence:
>426_bases ATGCGTCGTGGCCATGATTTCAAGACGGTAGTCAGCGACATCGAGACTGGAGAACTGCTGGAAGTTGTGGACAGTCATAA ACAAAAAGGAATTATTGAAAGCTTGTCACAGCAGCCTTTTAAGGTTCGTCAAGCAGTGAGGGAGGTCAGCATTGATATGT GGGGCGGCTTCACAAAAGTGGTGCAGCAAGTATTTCCCAAAGCCGTGATCGTCTACGACCGTTTCCATGGGACGCGGATG GTGGTCGAGGCGGTGAAGAAGATTGCTAAACAGTGCGGCTTTAGAAAGTGCAAAGAGCAAGCCTGCCTACTCAAAAACGG GGTGGATTTAAGTATCGAAGAGCAGGAGGAGTTAGAAACACGCCTGAAGAGCAGCCGGCGGCTGCGCAAAGCCTATGCAT ACAAAGAAGAGTTCCGTTCGATTTAA
Upstream 100 bases:
>100_bases ATCAGCCCGGAGGCAGTGCGGGGAATATTTGAGCATGTGGCAGTCGAGTCAAAAAAAAGACTGGGGCGAAGTAAAGCGCA TCAGCATCGATGAGTTTAGT
Downstream 100 bases:
>100_bases GAGACAAGCCGGACGCTGGAGGAAGGTCAGCAGCGATTGGAAGTGTGGCTGTTAAAAGTTTGGGTTAAAAGTTTGGAAGG TATATGGGCGGGTAGTGCAA
Product: putative transposase
Products: NA
Alternate protein names: Transposase Subfamily
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MRRGHDFKTVVSDIETGELLEVVDSHKQKGIIESLSQQPFKVRQAVREVSIDMWGGFTKVVQQVFPKAVIVYDRFHGTRM VVEAVKKIAKQCGFRKCKEQACLLKNGVDLSIEEQEELETRLKSSRRLRKAYAYKEEFRSI
Sequences:
>Translated_141_residues MRRGHDFKTVVSDIETGELLEVVDSHKQKGIIESLSQQPFKVRQAVREVSIDMWGGFTKVVQQVFPKAVIVYDRFHGTRM VVEAVKKIAKQCGFRKCKEQACLLKNGVDLSIEEQEELETRLKSSRRLRKAYAYKEEFRSI >Mature_141_residues MRRGHDFKTVVSDIETGELLEVVDSHKQKGIIESLSQQPFKVRQAVREVSIDMWGGFTKVVQQVFPKAVIVYDRFHGTRM VVEAVKKIAKQCGFRKCKEQACLLKNGVDLSIEEQEELETRLKSSRRLRKAYAYKEEFRSI
Specific function: Unknown
COG id: COG3464
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16348; Mature: 16348
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRGHDFKTVVSDIETGELLEVVDSHKQKGIIESLSQQPFKVRQAVREVSIDMWGGFTKV CCCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHCCCHHHH VQQVFPKAVIVYDRFHGTRMVVEAVKKIAKQCGFRKCKEQACLLKNGVDLSIEEQEELET HHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH RLKSSRRLRKAYAYKEEFRSI HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRRGHDFKTVVSDIETGELLEVVDSHKQKGIIESLSQQPFKVRQAVREVSIDMWGGFTKV CCCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHCCCHHHH VQQVFPKAVIVYDRFHGTRMVVEAVKKIAKQCGFRKCKEQACLLKNGVDLSIEEQEELET HHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH RLKSSRRLRKAYAYKEEFRSI HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA