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The map label for this gene is psaB [H]

Identifier: 37521397

GI number: 37521397

Start: 1947025

End: 1947708

Strand: Direct

Name: psaB [H]

Synonym: glr1828

Alternate gene names: 37521397

Gene position: 1947025-1947708 (Clockwise)

Preceding gene: 37521396

Following gene: 37521400

Centisome position: 41.79

GC content: 64.18

Gene sequence:

>684_bases
ATGCGGACTGTCTTTGTGCTTCGAGCAACGCTCCCGGCCCTGGTACTGCTGTTGGTGGCTTGCGGCAACAATCCCGCTCC
AACCACCGCCTCGCGCTCAGGGGAGCCCGCCGTCTCCACCCAGCCCATCGGTCGTTCGTTGGTCGCCCTCGACCCGAGCG
AAGTGGCCCTCATGTCCCCCACCGGCTCTGAGACCGCCGCGGACAGTGCCGGTGGTTCCGCCACCCGCAGCACCCAGATC
GCGGCCTCCGAAACGCAGGTGGTCAACCAGATCCTCTCCGACTTCAACGCCCAACGCACCGCCTCGGGAATCGTGGTCAC
CCTGCCGGAGGATATTCTCTTTGATTTCGACAAGGCCGATTTGCGCCCGAGCGCTCAGGTAGCCCTCCAGAAGATGGCCC
AGGTGATCAATTTCTACAAAAATGCCCCTATCGAGATCTCGGGCCACACCGACAGCAAGGGCGCCGACGGCTACAACCGG
AGCCTCTCCGAGCGGCGGGCCGAAGCGGTGCGCTCCTATCTGGCGAACAATTTCAGCGTCACGACGGGTCGCCTCACAGC
CCGCGGCCTGGGCGAGGGTAAGCCCGTCGCCCCCAACACCAAACCCGACGGCTCCGACGACCCGGCAGGCCGCCAGAAAA
ACCGCCGCGTCGAAATCTTGATCAAAAATCAGCCGGGCCAATAA

Upstream 100 bases:

>100_bases
ACATCACCCTCACCACCAACAGTGTTCTAGGCAGCGACTGGAAGCGCTCCGACAGGCCCAAGATGATCATCTCGGGCATT
CCCGTGGGAGGGTCATAAAC

Downstream 100 bases:

>100_bases
AAAAGCCCGCAGCTTTCGCCTCGGGCTTGTTGAAAATTGAAGCCGGATCAGACGCTGCCGGTCTGGGCAGCCACTTCCTC
AGCGAAGTTCTTCTCTTCTT

Product: outer membrane protein

Products: NA

Alternate protein names: PsaB [H]

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MRTVFVLRATLPALVLLLVACGNNPAPTTASRSGEPAVSTQPIGRSLVALDPSEVALMSPTGSETAADSAGGSATRSTQI
AASETQVVNQILSDFNAQRTASGIVVTLPEDILFDFDKADLRPSAQVALQKMAQVINFYKNAPIEISGHTDSKGADGYNR
SLSERRAEAVRSYLANNFSVTTGRLTARGLGEGKPVAPNTKPDGSDDPAGRQKNRRVEILIKNQPGQ

Sequences:

>Translated_227_residues
MRTVFVLRATLPALVLLLVACGNNPAPTTASRSGEPAVSTQPIGRSLVALDPSEVALMSPTGSETAADSAGGSATRSTQI
AASETQVVNQILSDFNAQRTASGIVVTLPEDILFDFDKADLRPSAQVALQKMAQVINFYKNAPIEISGHTDSKGADGYNR
SLSERRAEAVRSYLANNFSVTTGRLTARGLGEGKPVAPNTKPDGSDDPAGRQKNRRVEILIKNQPGQ
>Mature_227_residues
MRTVFVLRATLPALVLLLVACGNNPAPTTASRSGEPAVSTQPIGRSLVALDPSEVALMSPTGSETAADSAGGSATRSTQI
AASETQVVNQILSDFNAQRTASGIVVTLPEDILFDFDKADLRPSAQVALQKMAQVINFYKNAPIEISGHTDSKGADGYNR
SLSERRAEAVRSYLANNFSVTTGRLTARGLGEGKPVAPNTKPDGSDDPAGRQKNRRVEILIKNQPGQ

Specific function: PsaA and psaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which tran

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787191, Length=125, Percent_Identity=39.2, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI48994946, Length=123, Percent_Identity=32.520325203252, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1788957, Length=130, Percent_Identity=30.7692307692308, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006665
- InterPro:   IPR001280
- InterPro:   IPR020586
- InterPro:   IPR006244 [H]

Pfam domain/function: PF00691 OmpA; PF00223 PsaA_PsaB [H]

EC number: NA

Molecular weight: Translated: 23931; Mature: 23931

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTVFVLRATLPALVLLLVACGNNPAPTTASRSGEPAVSTQPIGRSLVALDPSEVALMSP
CCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECC
TGSETAADSAGGSATRSTQIAASETQVVNQILSDFNAQRTASGIVVTLPEDILFDFDKAD
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCEEEECCHHHHCCCCHHC
LRPSAQVALQKMAQVINFYKNAPIEISGHTDSKGADGYNRSLSERRAEAVRSYLANNFSV
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEE
TTGRLTARGLGEGKPVAPNTKPDGSDDPAGRQKNRRVEILIKNQPGQ
EECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
>Mature Secondary Structure
MRTVFVLRATLPALVLLLVACGNNPAPTTASRSGEPAVSTQPIGRSLVALDPSEVALMSP
CCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECC
TGSETAADSAGGSATRSTQIAASETQVVNQILSDFNAQRTASGIVVTLPEDILFDFDKAD
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCEEEECCHHHHCCCCHHC
LRPSAQVALQKMAQVINFYKNAPIEISGHTDSKGADGYNRSLSERRAEAVRSYLANNFSV
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEE
TTGRLTARGLGEGKPVAPNTKPDGSDDPAGRQKNRRVEILIKNQPGQ
EECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14621292 [H]