| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is yhhW [C]
Identifier: 37521392
GI number: 37521392
Start: 1942001
End: 1942699
Strand: Direct
Name: yhhW [C]
Synonym: glr1823
Alternate gene names: 37521392
Gene position: 1942001-1942699 (Clockwise)
Preceding gene: 37521391
Following gene: 37521396
Centisome position: 41.68
GC content: 64.81
Gene sequence:
>699_bases ATGATCACATTGCGAGCGAGCGAGAAGCGCGGCCGTGCCGAGCACGGCTGGTTGGACAGCCGCCACACTTTTTCTTTTGC CGACTACTACGACCCCCAGCACATGGGTTTTCGGTCCCTGCGGGTGATCAACGAGGACCGGGTGGCCCCCGGACAAGGCT TTGGCACCCATTCCCACCGCGACATGGAGATTATCACCTACGTGCTCGAAGGCGCCCTGGAGCACAAAGACAGCCTGGGC AACGGCTCGGTGATGCGTCCCGGCGACGTGCAGCGCATGAGTGCCGGTACCGGAGTGGCCCACAGCGAGTTCAACCACAG CAAGGGTGAGCCGGTCCATTTTCTGCAGATCTGGATCCTGCCGTCCGAGCGGGGAGTGATCCCCGGCTACGAGCAAAGCC ACTTCGACGCGGCCAGTAAGCAAGGCCGGTTGGTGCCGGTGGTGGCGGGCGACGGCCGCGAAGGGGCGCTGGCAGTCCAC CAGGACATGGTGCTCTATGCCGGTTTGTTGGGCGCGGGTGAGCGGGCGGAGCACACCCTTGCCCCGGGCCGCCAGGCCTG GGTGCAGGTGGCACGCGGTGCAATCACCCTGAACGGCAAAACCCTGACAGCGGGCGACGGCGCGGCGGTAACCGACGAGT CGCTTGTCGAACTGGTAGGGGTCGAACCGTCCGAAGTTCTGCTGTTCGATCTGGCGTAA
Upstream 100 bases:
>100_bases GACACCGGCAGACAAGTAGTTTAATATTAAAGTATTCGATGTATTATTATACTAGGACGAATTGAAGCCGGTAACCTTGC CGGCATTCCGGGAGACAGAC
Downstream 100 bases:
>100_bases CCCACAAGGCCGGTTGCCGGAGAGCGCTTCCGGGGTCCACGTAGCAACGGAACAGTAAACCGGGTTAGGGCTGAAAGGCT TGCCACGAGAATTTCTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein sll1773 [H]
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MITLRASEKRGRAEHGWLDSRHTFSFADYYDPQHMGFRSLRVINEDRVAPGQGFGTHSHRDMEIITYVLEGALEHKDSLG NGSVMRPGDVQRMSAGTGVAHSEFNHSKGEPVHFLQIWILPSERGVIPGYEQSHFDAASKQGRLVPVVAGDGREGALAVH QDMVLYAGLLGAGERAEHTLAPGRQAWVQVARGAITLNGKTLTAGDGAAVTDESLVELVGVEPSEVLLFDLA
Sequences:
>Translated_232_residues MITLRASEKRGRAEHGWLDSRHTFSFADYYDPQHMGFRSLRVINEDRVAPGQGFGTHSHRDMEIITYVLEGALEHKDSLG NGSVMRPGDVQRMSAGTGVAHSEFNHSKGEPVHFLQIWILPSERGVIPGYEQSHFDAASKQGRLVPVVAGDGREGALAVH QDMVLYAGLLGAGERAEHTLAPGRQAWVQVARGAITLNGKTLTAGDGAAVTDESLVELVGVEPSEVLLFDLA >Mature_232_residues MITLRASEKRGRAEHGWLDSRHTFSFADYYDPQHMGFRSLRVINEDRVAPGQGFGTHSHRDMEIITYVLEGALEHKDSLG NGSVMRPGDVQRMSAGTGVAHSEFNHSKGEPVHFLQIWILPSERGVIPGYEQSHFDAASKQGRLVPVVAGDGREGALAVH QDMVLYAGLLGAGERAEHTLAPGRQAWVQVARGAITLNGKTLTAGDGAAVTDESLVELVGVEPSEVLLFDLA
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=108, Percent_Identity=40.7407407407407, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI4505823, Length=108, Percent_Identity=40.7407407407407, Blast_Score=72, Evalue=4e-13, Organism=Escherichia coli, GI1789847, Length=231, Percent_Identity=53.6796536796537, Blast_Score=257, Evalue=6e-70, Organism=Escherichia coli, GI1789493, Length=236, Percent_Identity=33.8983050847458, Blast_Score=134, Evalue=3e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 25132; Mature: 25132
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLRASEKRGRAEHGWLDSRHTFSFADYYDPQHMGFRSLRVINEDRVAPGQGFGTHSHR CEEEECCCCCCCCCCCCCCCCCEEEEHHCCCCHHCCHHHEEEECCCCCCCCCCCCCCCCC DMEIITYVLEGALEHKDSLGNGSVMRPGDVQRMSAGTGVAHSEFNHSKGEPVHFLQIWIL CHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEEEEE PSERGVIPGYEQSHFDAASKQGRLVPVVAGDGREGALAVHQDMVLYAGLLGAGERAEHTL ECCCCCCCCCCCHHCCHHHCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHCCCCCCCCCC APGRQAWVQVARGAITLNGKTLTAGDGAAVTDESLVELVGVEPSEVLLFDLA CCCHHHHHHHHCCEEEECCEEEECCCCCCCCHHHHHHHHCCCCCCEEEEECC >Mature Secondary Structure MITLRASEKRGRAEHGWLDSRHTFSFADYYDPQHMGFRSLRVINEDRVAPGQGFGTHSHR CEEEECCCCCCCCCCCCCCCCCEEEEHHCCCCHHCCHHHEEEECCCCCCCCCCCCCCCCC DMEIITYVLEGALEHKDSLGNGSVMRPGDVQRMSAGTGVAHSEFNHSKGEPVHFLQIWIL CHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEEEEE PSERGVIPGYEQSHFDAASKQGRLVPVVAGDGREGALAVHQDMVLYAGLLGAGERAEHTL ECCCCCCCCCCCHHCCHHHCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHCCCCCCCCCC APGRQAWVQVARGAITLNGKTLTAGDGAAVTDESLVELVGVEPSEVLLFDLA CCCHHHHHHHHCCEEEECCEEEECCCCCCCCHHHHHHHHCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]