| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37521223
Identifier: 37521223
GI number: 37521223
Start: 1768665
End: 1769798
Strand: Reverse
Name: 37521223
Synonym: gll1654
Alternate gene names: NA
Gene position: 1769798-1768665 (Counterclockwise)
Preceding gene: 37521224
Following gene: 37521222
Centisome position: 37.99
GC content: 62.7
Gene sequence:
>1134_bases ATGGCTGCTCCCCTTGCTCCCGACGAGCCCCAACGCCTGGAGGCGCTCGAACGCTACCGGGTGCTCGATACCCCGGCGGA GGCCGTCTTTGACGACATCGTCGAAATTGCCGCGCGCCAGTGCCATATGCCGATTTCACTCATTTCGCTTATCGACCGCG ATCGCCAGTGGTTCAAAGCCCGGGTGGGTGTCGAAGTGCAGCAGACGCCGCGTGAACTGGCCTTCTGTACCCACGCCATC TTGCAGCGCGAGACGTTCATCGTGCCCGACGCCCGCATCGACGAGCGCTTCTCCACCAATCCCCTGGTGATCCATTCGCC CCAGGTGCGCTTTTACGCCGGTACGCCGCTGGTAACCCCCGACAATCGGGCTCTCGGCACGCTGTGCGTCCTGGACTACC AGCCGCGGGAGTTTCCGCCCGACCAGCAAGACCGGCTCTGGCACCTCAACCGGCAGGTGATGATGTACCTGGAATTGCGC CGCAAGTTGCTGGCGTTGCAACAAACTATCCGCACCAGCCTGGACACGGCGACCCGTCGGCAAATCGACAGCGACATCTA CCTGTTGCAAAGCCTGACCGAGGCTATTCAGGAAGCCCACGATTTTCATGGCGCCCTGCAACGGCTTTTGCAGTTTCTTT GCAAGGCGACGGGCTGGCCCATCGCCACCGCCTCGACCCCCAGCCCGGACGAGAGCGTTCTGGAAGCGAGCCCCGCCTAT TACGCCGATGAAGAGCAACTGGCACACCTGCAAAAGTTGCGCGGCCACAAGAGCGCTCCCGGCATCGACCCGATGGAACT CGAACGCTTCCGAGGTTTAGGAGAGCGGTTGCTGTTCCGCCCGGGCGAAGGTTTGCAAGGGCGCATCTGGCTGAGCAGGC AACCGGAGAAATGGCCCTCCCAGACTTCGCTGCGCTCCCCCATCATCGAGATGCACGAGAAGGTGGCCCATGCCGCCGGA CTCAAAACCGGGCTCGGCGTTCCTCTGATTGTCGAAGAACAGGTGCTGGCGGTACTGGTCTTCTTCAGTTGGGAAGCCCA GATGCCGATCGAACCGCTGCTGCGCCTGATGACCACCGTCACCCAACTGCAGGTGCAGCCGACGACGACGGTGGCGGCTG CACCGGTCCTCTAG
Upstream 100 bases:
>100_bases AACATGGACAGTACAACGGAGCGTGCACCGTCGGCTTGCGGCAGTCGGACCGTACCGCGGCTGCACAGCCTCTGAAATAT CCGACATTCCGCGAAGGACC
Downstream 100 bases:
>100_bases CAGGATCAGCCCGGTTCCGGCCGACGCACCAGATCGCTTTCGAAAAATTTCATACCCAGCTTGAGTTTGCCCGGCACGAT CTCCACAGAGCTGAGCACGA
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Transduction Histidine Kinase; Diguanylate Cyclase; Multi-Sensor Hybrid Histidine Kinase; GAF Sensor Protein; Two-Component Hybrid Sensor And Regulator; Multi-Sensor Signal Transduction Histidine Kinase; GGDEF Domain-Containing Protein; Diguanylate Cyclase With PAS/PAC Sensor; Sensor Protein; GAF Domain-Containing Protein; PAS Sensor Protein; Histidine Kinase Response Regulator Hybrid Protein; Histidine Kinase-Response Regulator Hybrid Protein; Two-Component Sensor Histidine Kinase; Two-Component System Sensor Histidine Kinase; GGDEF Domain Protein; GAF Sensor Signal Transduction Histidine Kinase; PAS Fold Family; Diguanylate Cyclase With PAS/PAC And GAF Sensors; Sensory Box/GGDEF Family Protein; Histidine Kinase/Response Regulator Hybrid Protein; Sensor Histidine Kinase; GAF Sensor Hybrid Histidine Kinase; GAF Sensor Diguanylate Cyclase; GAF Domain/GGDEF Domain/EAL Domain-Containing Protein; Signal Transduction Protein; Diguanylate Phosphodiesterase With GAF Sensor; Sensory Transduction Histidine Kinase; PAS/PAC Sensor Protein; ATPase Histidine Kinase- DNA Gyrase B- And; Response Regulator Receiver Domain Protein; HWE Histidine Kinase; GAF Sensor-Containing Diguanylate Cyclase/Phosphodiesterase; GAF Sensor-Containing Diguanylate Cyclase; Pas/Pac Sensor Protein; Stage II Sporulation E Family Protein; GGDEF GAF Signalling Protein; Sensory Histidine Protein Kinase; Phytochrome Sensor Protein; GAF Domain/GGDEF Domain Protein; Two Component System Sensor Protein; Sensory Box Histidine Kinase/Response Regulator; Protein Containing GAF Domain; GAF Domain Protein; Adenylate Cyclase; Sensor Histidine Kinase/GAF Domain-Containing Protein; Histidine Kinase Of HWE Family; GGDEF Domain-Containing PAS Signal Transduction Protein; GAF/PAS-Family Sensor Histidine Kinase; PAS/PAC Sensor Hybrid Histidine Kinase; Two-Component System Sensor Kinase; GAF And Chase3 Sensor Phosphotransfer Protein; FOG GGDEF Domain Protein; Signal Transduction Histidine Kinase-Like Protein; Serine/Threonine Protein Kinase; Cyclic Diguanylate Phosphodiesterase/Diguanylate Cyclase; Diguanylate-Cyclase; Diguanylate Phosphodiesterase; Signaling Protein; Gaf Sensor Signal Transduction Histidine Kinase; GGDEF And GAF Signalling Protein; Phosphodiesterase; GGDEF Family Protein; Sensor Kinase Protein
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MAAPLAPDEPQRLEALERYRVLDTPAEAVFDDIVEIAARQCHMPISLISLIDRDRQWFKARVGVEVQQTPRELAFCTHAI LQRETFIVPDARIDERFSTNPLVIHSPQVRFYAGTPLVTPDNRALGTLCVLDYQPREFPPDQQDRLWHLNRQVMMYLELR RKLLALQQTIRTSLDTATRRQIDSDIYLLQSLTEAIQEAHDFHGALQRLLQFLCKATGWPIATASTPSPDESVLEASPAY YADEEQLAHLQKLRGHKSAPGIDPMELERFRGLGERLLFRPGEGLQGRIWLSRQPEKWPSQTSLRSPIIEMHEKVAHAAG LKTGLGVPLIVEEQVLAVLVFFSWEAQMPIEPLLRLMTTVTQLQVQPTTTVAAAPVL
Sequences:
>Translated_377_residues MAAPLAPDEPQRLEALERYRVLDTPAEAVFDDIVEIAARQCHMPISLISLIDRDRQWFKARVGVEVQQTPRELAFCTHAI LQRETFIVPDARIDERFSTNPLVIHSPQVRFYAGTPLVTPDNRALGTLCVLDYQPREFPPDQQDRLWHLNRQVMMYLELR RKLLALQQTIRTSLDTATRRQIDSDIYLLQSLTEAIQEAHDFHGALQRLLQFLCKATGWPIATASTPSPDESVLEASPAY YADEEQLAHLQKLRGHKSAPGIDPMELERFRGLGERLLFRPGEGLQGRIWLSRQPEKWPSQTSLRSPIIEMHEKVAHAAG LKTGLGVPLIVEEQVLAVLVFFSWEAQMPIEPLLRLMTTVTQLQVQPTTTVAAAPVL >Mature_376_residues AAPLAPDEPQRLEALERYRVLDTPAEAVFDDIVEIAARQCHMPISLISLIDRDRQWFKARVGVEVQQTPRELAFCTHAIL QRETFIVPDARIDERFSTNPLVIHSPQVRFYAGTPLVTPDNRALGTLCVLDYQPREFPPDQQDRLWHLNRQVMMYLELRR KLLALQQTIRTSLDTATRRQIDSDIYLLQSLTEAIQEAHDFHGALQRLLQFLCKATGWPIATASTPSPDESVLEASPAYY ADEEQLAHLQKLRGHKSAPGIDPMELERFRGLGERLLFRPGEGLQGRIWLSRQPEKWPSQTSLRSPIIEMHEKVAHAAGL KTGLGVPLIVEEQVLAVLVFFSWEAQMPIEPLLRLMTTVTQLQVQPTTTVAAAPVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42779; Mature: 42648
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPLAPDEPQRLEALERYRVLDTPAEAVFDDIVEIAARQCHMPISLISLIDRDRQWFKA CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RVGVEVQQTPRELAFCTHAILQRETFIVPDARIDERFSTNPLVIHSPQVRFYAGTPLVTP HCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCEEEECCCEEEEECCCCCCC DNRALGTLCVLDYQPREFPPDQQDRLWHLNRQVMMYLELRRKLLALQQTIRTSLDTATRR CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIDSDIYLLQSLTEAIQEAHDFHGALQRLLQFLCKATGWPIATASTPSPDESVLEASPAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHCCCCC YADEEQLAHLQKLRGHKSAPGIDPMELERFRGLGERLLFRPGEGLQGRIWLSRQPEKWPS CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHEECCCCCCCEEEEECCCCCCCCC QTSLRSPIIEMHEKVAHAAGLKTGLGVPLIVEEQVLAVLVFFSWEAQMPIEPLLRLMTTV CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHH TQLQVQPTTTVAAAPVL HHHEECCCCHHHCCCCC >Mature Secondary Structure AAPLAPDEPQRLEALERYRVLDTPAEAVFDDIVEIAARQCHMPISLISLIDRDRQWFKA CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RVGVEVQQTPRELAFCTHAILQRETFIVPDARIDERFSTNPLVIHSPQVRFYAGTPLVTP HCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCEEEECCCEEEEECCCCCCC DNRALGTLCVLDYQPREFPPDQQDRLWHLNRQVMMYLELRRKLLALQQTIRTSLDTATRR CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIDSDIYLLQSLTEAIQEAHDFHGALQRLLQFLCKATGWPIATASTPSPDESVLEASPAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHCCCCC YADEEQLAHLQKLRGHKSAPGIDPMELERFRGLGERLLFRPGEGLQGRIWLSRQPEKWPS CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHEECCCCCCCEEEEECCCCCCCCC QTSLRSPIIEMHEKVAHAAGLKTGLGVPLIVEEQVLAVLVFFSWEAQMPIEPLLRLMTTV CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHH TQLQVQPTTTVAAAPVL HHHEECCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA