| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is cobK [H]
Identifier: 37521205
GI number: 37521205
Start: 1752172
End: 1752927
Strand: Reverse
Name: cobK [H]
Synonym: gvip229
Alternate gene names: 37521205
Gene position: 1752927-1752172 (Counterclockwise)
Preceding gene: 37521209
Following gene: 37521204
Centisome position: 37.62
GC content: 65.21
Gene sequence:
>756_bases GTGTCCATGATCTGGCTGATTGGCGGCACCAGTGAGAGTCGCAGTATCGCCCAGGCACTCGCCGGGGCCAGAGTTCCCTG GGTGGCGACGGTGACCACGGCGCGGGCTGCCGGACTCTACACGGGTCTGCCGGGGGAGGTGGGGGTCGGTCCCCTCAACA CCGAAGCCTTGGGGGCTTTTTTGGCCGCCCACCGGCCCCTGGCGGTGGTCGATGCTTCCCATCCTTTTGCTGCGCAGATT TCGCGGCTGGCCATGGCCGTAGGGTTGCCGTATTTGCGCTACGAGCGACCGAGTGTGTCCCTGGCACCCGAAACGGAGCA ATTTCCCGATTTCGCAGCGCTCGTCCATTCGCAGGTGCTCGATGGGCGCCGGGTGCTGCTCACCGTGGGCGTCAAAGCGC TGCCGCTTCTGGCTCCTTTGCAGGGGCGGGCCGCGCTCTGGGCGCGGGTATTGCCCGAATCGGCCGCACAGGCGCACTCG GCCGGCTTTGCCCTGAACCGGCTCATCCTCACCCGCCCACCAGTAGATGCCGGGGCGGAGCGGGAGTTGTGGCAACGGCT CGCTGTCGATACGGTGGTCACCAAAGAAGGCGGCGAAGCGGGCGGGGTCGACGTCAAGCAAGTCGTTGCCCGGCAGTTGG GCGTGCGTCTGGTGGTAATTGCCAGGCCCACCCTTGCCTATCCCCGCCAGACAGCCAATTTGTCCGAAGTTCTGGCCTTT GCCCAGAAATTTTTACACCCGGCATTAGATCAGTAG
Upstream 100 bases:
>100_bases CACTGGGGGCCGGGGGTCCCCATGATCGGTATCACAGATAACCGGCCGGTCGTGACCCATCTCACGGAGTCACGCCGGGA GTTGGCACCACGGTACACTC
Downstream 100 bases:
>100_bases AATCGACGTATCGTCCCGCTTTTTTCGATGAGCACTGAGCAACGCCTGGACAACATCGATGCCCGATTGGATCGGTTGGT TACGGTGGTCGAGCAGACCA
Product: cobalt-precorrin-6x reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MSMIWLIGGTSESRSIAQALAGARVPWVATVTTARAAGLYTGLPGEVGVGPLNTEALGAFLAAHRPLAVVDASHPFAAQI SRLAMAVGLPYLRYERPSVSLAPETEQFPDFAALVHSQVLDGRRVLLTVGVKALPLLAPLQGRAALWARVLPESAAQAHS AGFALNRLILTRPPVDAGAERELWQRLAVDTVVTKEGGEAGGVDVKQVVARQLGVRLVVIARPTLAYPRQTANLSEVLAF AQKFLHPALDQ
Sequences:
>Translated_251_residues MSMIWLIGGTSESRSIAQALAGARVPWVATVTTARAAGLYTGLPGEVGVGPLNTEALGAFLAAHRPLAVVDASHPFAAQI SRLAMAVGLPYLRYERPSVSLAPETEQFPDFAALVHSQVLDGRRVLLTVGVKALPLLAPLQGRAALWARVLPESAAQAHS AGFALNRLILTRPPVDAGAERELWQRLAVDTVVTKEGGEAGGVDVKQVVARQLGVRLVVIARPTLAYPRQTANLSEVLAF AQKFLHPALDQ >Mature_250_residues SMIWLIGGTSESRSIAQALAGARVPWVATVTTARAAGLYTGLPGEVGVGPLNTEALGAFLAAHRPLAVVDASHPFAAQIS RLAMAVGLPYLRYERPSVSLAPETEQFPDFAALVHSQVLDGRRVLLTVGVKALPLLAPLQGRAALWARVLPESAAQAHSA GFALNRLILTRPPVDAGAERELWQRLAVDTVVTKEGGEAGGVDVKQVVARQLGVRLVVIARPTLAYPRQTANLSEVLAFA QKFLHPALDQ
Specific function: Catalyzes the reduction of the macrocycle of cobalt- precorrin-6X into cobalt-precorrin-6Y [H]
COG id: COG2099
COG function: function code H; Precorrin-6x reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin-6x reductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003723 [H]
Pfam domain/function: PF02571 CbiJ [H]
EC number: NA
Molecular weight: Translated: 26580; Mature: 26449
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: PS51014 COBK_CBIJ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMIWLIGGTSESRSIAQALAGARVPWVATVTTARAAGLYTGLPGEVGVGPLNTEALGAF CEEEEEEECCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH LAAHRPLAVVDASHPFAAQISRLAMAVGLPYLRYERPSVSLAPETEQFPDFAALVHSQVL HHHCCCEEEEECCCCHHHHHHHHHHHHCCCHHEECCCCCCCCCCCHHCCHHHHHHHHHHH DGRRVLLTVGVKALPLLAPLQGRAALWARVLPESAAQAHSAGFALNRLILTRPPVDAGAE CCCEEEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHH RELWQRLAVDTVVTKEGGEAGGVDVKQVVARQLGVRLVVIARPTLAYPRQTANLSEVLAF HHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHH AQKFLHPALDQ HHHHHHHCCCC >Mature Secondary Structure SMIWLIGGTSESRSIAQALAGARVPWVATVTTARAAGLYTGLPGEVGVGPLNTEALGAF EEEEEEECCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH LAAHRPLAVVDASHPFAAQISRLAMAVGLPYLRYERPSVSLAPETEQFPDFAALVHSQVL HHHCCCEEEEECCCCHHHHHHHHHHHHCCCHHEECCCCCCCCCCCHHCCHHHHHHHHHHH DGRRVLLTVGVKALPLLAPLQGRAALWARVLPESAAQAHSAGFALNRLILTRPPVDAGAE CCCEEEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHH RELWQRLAVDTVVTKEGGEAGGVDVKQVVARQLGVRLVVIARPTLAYPRQTANLSEVLAF HHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHH AQKFLHPALDQ HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]