| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is yhjO [H]
Identifier: 37521114
GI number: 37521114
Start: 1665947
End: 1667209
Strand: Reverse
Name: yhjO [H]
Synonym: gll1545
Alternate gene names: 37521114
Gene position: 1667209-1665947 (Counterclockwise)
Preceding gene: 37521115
Following gene: 37521109
Centisome position: 35.78
GC content: 66.98
Gene sequence:
>1263_bases GTGACGAGCAAGCCGCCCGCAACGGCGCGCCCTAGCTTCCTGCCGGACCTGCCGGCGCCCGTCTGGATTTTGTTTGCCGG TCGGCTGCTCGCCTCGCTCGGGCTGGGCTTCGTGCTGTTCTATTCGGCCATCTTTTTTACCGGTGCGCTGGGCATCAGCT ACACCCAGCTCGGGCTGGGCCTCGCTTCCTCGGCAGTCAGCGGCATTTTCGCCCGCCTGGTGGGCGGCACGCTCACCGAC CGCCCCGATTGGGGGCGGCGGCGCACGCTGCTGGCGGCCCTGGTGATCTTGAGCGTCGGTTATGTCATGTTTGCGCTTGC GGACAATTTCGCGCTCTTCGTGGCGGCAAACGTGATTACCGGTTGGGGCTTCGGCCTTTACTGGCCCGCCAACGAGGCGG TGGTGGCCGATTTGACCGAGGGCAAGCAGCGCGCCGAAGCTTACGGTCTTACGCGCTCGGGCGACAGCATCGGTCTGGGA TTGGGGGCGGTGGTGGGCATTGCGGTGATCGCCCTGACCGGCAACTACCGTCTGCTCTTCTGGCTCAACGCCTGCGCGTT TTTGGGATTTTTTGCCGTGGTGGCCCGGGGTGTCCCCGAGACGCGCCCGGAGCATCTGGAGGCGCACCCATCCCTGGGGG GTTATCCTGAGGCGCTGCGCGACCGCAACTTGTGGTTGTACGCGGCGGCAAACCTGGTCTTCACCACGATCGTTGCCCAA CTCGAAAGCACCGTGCCCGTCTACCTGCGCAACTTCGCGGGCCTCAGCACCGAGGCGGTGGGTGCCTGCTTCACCCTGCA CGTCGCGCTGATGGCCGCCATTCAGCTGTGGGTGGCCCGGGGCACTTCGGCCTGGCGGCGCACCCGCACCCTGATGCTCG CAGCGGTGGTGCTGGCGGCGGCGCTGGTCATCATCTGGCTTGCCGGAACCATCGCGGGGTCCGCTTTGGGTCTCGCGGCA CTGGCTTTGGCGGTGGCGGCGGTGGGGCTCACCTTTATGCATCCGGCGGCGGCGACGCTGGTGGCGGCGATGTCCCCGCA AAATATGCGGGGGGTGTACCTGTCGATCAATTCCCAGTGCTGGGCGTTGGGTTATATGATCGGCCCCGCCGTGGGCGGAC GGATCCTGGATCTGCCCCGGCCTCTGAGCGACTGGCTCTGGCCGGGCTTTGGGCTGCTGCTGCTCCTCGACTGTCTGGTG CTGGGCTGGCTGGAAGTGCGCCTGCCGCCCGCGGTCAATGCGGCCGGGAAGGTGCAGTCTTGA
Upstream 100 bases:
>100_bases AAAGAAAATCTCTGGGGTACCAAGCTGCTGGCGGACGCGGCGATGGTGCTGACCACCCCGCGCATCAAAGCGGCCCTGGA GCGACTGCCGGAGCCTACCA
Downstream 100 bases:
>100_bases TGGATAGCGGCACTTTCTCTTGAGGCTTAAGAGCGAGTTGGATCCGCAAGCTTCACTCGTAATGACCGCCGGTGACTTTG CCGCGGAAGACGACGTACTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MTSKPPATARPSFLPDLPAPVWILFAGRLLASLGLGFVLFYSAIFFTGALGISYTQLGLGLASSAVSGIFARLVGGTLTD RPDWGRRRTLLAALVILSVGYVMFALADNFALFVAANVITGWGFGLYWPANEAVVADLTEGKQRAEAYGLTRSGDSIGLG LGAVVGIAVIALTGNYRLLFWLNACAFLGFFAVVARGVPETRPEHLEAHPSLGGYPEALRDRNLWLYAAANLVFTTIVAQ LESTVPVYLRNFAGLSTEAVGACFTLHVALMAAIQLWVARGTSAWRRTRTLMLAAVVLAAALVIIWLAGTIAGSALGLAA LALAVAAVGLTFMHPAAATLVAAMSPQNMRGVYLSINSQCWALGYMIGPAVGGRILDLPRPLSDWLWPGFGLLLLLDCLV LGWLEVRLPPAVNAAGKVQS
Sequences:
>Translated_420_residues MTSKPPATARPSFLPDLPAPVWILFAGRLLASLGLGFVLFYSAIFFTGALGISYTQLGLGLASSAVSGIFARLVGGTLTD RPDWGRRRTLLAALVILSVGYVMFALADNFALFVAANVITGWGFGLYWPANEAVVADLTEGKQRAEAYGLTRSGDSIGLG LGAVVGIAVIALTGNYRLLFWLNACAFLGFFAVVARGVPETRPEHLEAHPSLGGYPEALRDRNLWLYAAANLVFTTIVAQ LESTVPVYLRNFAGLSTEAVGACFTLHVALMAAIQLWVARGTSAWRRTRTLMLAAVVLAAALVIIWLAGTIAGSALGLAA LALAVAAVGLTFMHPAAATLVAAMSPQNMRGVYLSINSQCWALGYMIGPAVGGRILDLPRPLSDWLWPGFGLLLLLDCLV LGWLEVRLPPAVNAAGKVQS >Mature_419_residues TSKPPATARPSFLPDLPAPVWILFAGRLLASLGLGFVLFYSAIFFTGALGISYTQLGLGLASSAVSGIFARLVGGTLTDR PDWGRRRTLLAALVILSVGYVMFALADNFALFVAANVITGWGFGLYWPANEAVVADLTEGKQRAEAYGLTRSGDSIGLGL GAVVGIAVIALTGNYRLLFWLNACAFLGFFAVVARGVPETRPEHLEAHPSLGGYPEALRDRNLWLYAAANLVFTTIVAQL ESTVPVYLRNFAGLSTEAVGACFTLHVALMAAIQLWVARGTSAWRRTRTLMLAAVVLAAALVIIWLAGTIAGSALGLAAL ALAVAAVGLTFMHPAAATLVAAMSPQNMRGVYLSINSQCWALGYMIGPAVGGRILDLPRPLSDWLWPGFGLLLLLDCLVL GWLEVRLPPAVNAAGKVQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 44356; Mature: 44224
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKPPATARPSFLPDLPAPVWILFAGRLLASLGLGFVLFYSAIFFTGALGISYTQLGLG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LASSAVSGIFARLVGGTLTDRPDWGRRRTLLAALVILSVGYVMFALADNFALFVAANVIT HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH GWGFGLYWPANEAVVADLTEGKQRAEAYGLTRSGDSIGLGLGAVVGIAVIALTGNYRLLF CCCCEEEECCCCCEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEECCEEEEH WLNACAFLGFFAVVARGVPETRPEHLEAHPSLGGYPEALRDRNLWLYAAANLVFTTIVAQ HHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHCCCEEEEHHHHHHHHHHHHH LESTVPVYLRNFAGLSTEAVGACFTLHVALMAAIQLWVARGTSAWRRTRTLMLAAVVLAA HHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ALVIIWLAGTIAGSALGLAALALAVAAVGLTFMHPAAATLVAAMSPQNMRGVYLSINSQC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCH WALGYMIGPAVGGRILDLPRPLSDWLWPGFGLLLLLDCLVLGWLEVRLPPAVNAAGKVQS HHHHHHHHHHCCCEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TSKPPATARPSFLPDLPAPVWILFAGRLLASLGLGFVLFYSAIFFTGALGISYTQLGLG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LASSAVSGIFARLVGGTLTDRPDWGRRRTLLAALVILSVGYVMFALADNFALFVAANVIT HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH GWGFGLYWPANEAVVADLTEGKQRAEAYGLTRSGDSIGLGLGAVVGIAVIALTGNYRLLF CCCCEEEECCCCCEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEECCEEEEH WLNACAFLGFFAVVARGVPETRPEHLEAHPSLGGYPEALRDRNLWLYAAANLVFTTIVAQ HHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHCCCEEEEHHHHHHHHHHHHH LESTVPVYLRNFAGLSTEAVGACFTLHVALMAAIQLWVARGTSAWRRTRTLMLAAVVLAA HHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ALVIIWLAGTIAGSALGLAALALAVAAVGLTFMHPAAATLVAAMSPQNMRGVYLSINSQC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCH WALGYMIGPAVGGRILDLPRPLSDWLWPGFGLLLLLDCLVLGWLEVRLPPAVNAAGKVQS HHHHHHHHHHCCCEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]