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The map label for this gene is zam [H]

Identifier: 37521017

GI number: 37521017

Start: 1550178

End: 1552286

Strand: Reverse

Name: zam [H]

Synonym: gll1448

Alternate gene names: 37521017

Gene position: 1552286-1550178 (Counterclockwise)

Preceding gene: 37521019

Following gene: 37521014

Centisome position: 33.32

GC content: 66.62

Gene sequence:

>2109_bases
ATGGGCATGCAATTTTCTGTACACGACTTGCTGGGTCTACTCTCACCGGAACGCTCGGTGGCGCCGAAGGTGCTTCAGCA
AAAGCTTTCCCTCGATGACGGCGCGGCGCTTGCCCAGCTGCAACTGGTGCTCGACGCCCTCGAGAAAGTCGGCCTGATCG
AGAAAATGCAGGGCCGCTACCGCCTGGTTGCCAACGAAGAAATCGTCGGCGGACGCCTGCGCTGCAGCTCAAAAGGCTTC
TGCTTTGTGACCCCCGAGCAGCCGGAGGCGGAGGAAATTTTTGTCGTCGAAGGTAGCCTCAAAAATGCCTGGAATGGCGA
TCGGGTGCTGGTGCGCCTGCTCAAAAAAGCTTCGCGCCGCCGCAAACCCGAAGGAGAAGTGGTGCTGGTGACCGAGCGGG
CGCACACCGCCCTGGTGGGCCGCCTCGCCGAAGCGGACGCGGGCGAAGACAAGCCCAAACTCCTGCAGGTCGCTCCCCTG
GACGACCGGCTGGGCAGCGTTCTGGAGTTGGTCGATGCCGAAATTCCGGACGTGGCGGCCGACTTGATTGTCGAGGTGGA
GATCACCCGCTATCCTCTAGGGCGGCGGCCGGCCAAATGCCGATTGCTGCGCGTGCTCGGCCACGCCAACGATCCGCTGG
TGGATCTCGACCTGGTGGCCAGCCGCTATCAGTTGCCGCTCGAGTTTCCCCAGGCGGTGCTCGATGCGGCTGCACAGCTT
GCCGCATCCGCGGCGCCGGAGGGGCGCGAGGATCTGCAGGCGCTCGAAGTGTGGGCGCTGCCGGGGGAATTGCTCCAGAC
GGCCCTCTCGTTGGTACCGACGGAGGGCGGTTGGGAACTGGGTTTGCACGTGAGCGATGTGGCGGTGCTGGTGGAGGCGG
GTTCGACCCTCGACGCCGAGGCCTACCGGCGCGGCCTGGCGGCGCGCCTGCGCGATCGCAGCCTCAGACTGTGGCCCGAC
GCGCTGCTGGAGCGTTGCGCTCTGCTGCCCGACACCGGCCGTTCCGCCTGGTCGGTGCTGGTAAACCTCGACACCACGGG
CCAGGTGCGCGCCTTTCGCTGGACACCCTCGCTGGTGCGCGCCCGCGGCCGCCTGGAGAGCCTGAGTGAACCCTACGCCG
CCGTCGCCGCCGCCCTGGCCGCCCAGGGGACAGGCCCGCTGCTCGGCGCTTCGGATCCGCGCATTTTTATCGAACTGCTC
GAATCGCTCATCGGGCAGCATCTGGCCCACCTGCACCTGGGGGCACCCTTTTTGTTCGAGCCGGGGCCGCAGGGCGGCGA
GGTGGTCGACTGGCTGCGCCTGGCGCGCGCCTGCGGCCTGGAGGTGCCCGAGGCGGACGCTTCGGTGGAACTCACCGTGC
GGCAGTACCGCACCTGGCTTCTGGAGCAGCCCGAGGGGGCCAACCGCGCCCTGCGCGAGCTGCTGCTGACCACCCTGCCG
GTGGAACAATTCGCGGCGGAGCCCCGGCACCACTTCGGGCGCGACAGCATGGCGGTCGCCCCTTTTGGCCGTCCGCTCGA
ACACTACGGCGACCTGTTGGTGCAGCGCTTACTCCAGCAGGTGCACACCGACGGCCGCGATCGCAAGACGCCGCGCAGCA
AGGTGAGCGTCGATCTGCACTCTTCGAACTGCCATGGGCTCATCGACTGGCCGGTGCTCAAACCCAAAGTCCAAAAAGAC
TGGGAGGAGGCGCTGCCAGGCTCGGTAAGCCACCTCAGCGCGCGGCTGCAGCAGGTGCACCAGGCCCAGGCGGACCTGGA
GGGCTTCGAGCGCATCGGCCGGCTCGGCACCCAGACCGAACCCCTCAGGGGGCTGATTACCGGTGTGCAATCCTACGGAT
TTTTCGTCGCCGTCGAAGAACCCTTCGTCGAGGGCCTGGTGCACGTCAGCGGTCTCAAAGACGACTGGTACACCTTCCAG
GCGCGCGAACCCGCCTTGATCGGCAGACGCAGCCGCCGCCGCTTTCAAATTGGCGACACGGTCACCGTCAAAGTCAAGGG
GATAGACTACTACCGCCAACAAGTGGACTTGATGGTGGTGCGCGACGAGTCGGAACCACCCACGGAGGAGGGTACCGAAG
CGCCGCTGCTTGCCGCACCGGAAGCGTGA

Upstream 100 bases:

>100_bases
GGCACCCAGTGTAAGACTCCCCGTGCGAACAACAGGGCCTAAACGTTACCATGAACGCTAATCGGGCAAGCTCACTAAAC
AAGATCTATGGAAGCGGGGT

Downstream 100 bases:

>100_bases
ACGGCGGCGTTGCCCCTCAGCCGCCGTTGGGCAGCGAGGCGGCGCTGATCGAACTGGAAGAAAGCACCCGGCTTTCGATC
GTCTTTTCGATGAAGGGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 702; Mature: 701

Protein sequence:

>702_residues
MGMQFSVHDLLGLLSPERSVAPKVLQQKLSLDDGAALAQLQLVLDALEKVGLIEKMQGRYRLVANEEIVGGRLRCSSKGF
CFVTPEQPEAEEIFVVEGSLKNAWNGDRVLVRLLKKASRRRKPEGEVVLVTERAHTALVGRLAEADAGEDKPKLLQVAPL
DDRLGSVLELVDAEIPDVAADLIVEVEITRYPLGRRPAKCRLLRVLGHANDPLVDLDLVASRYQLPLEFPQAVLDAAAQL
AASAAPEGREDLQALEVWALPGELLQTALSLVPTEGGWELGLHVSDVAVLVEAGSTLDAEAYRRGLAARLRDRSLRLWPD
ALLERCALLPDTGRSAWSVLVNLDTTGQVRAFRWTPSLVRARGRLESLSEPYAAVAAALAAQGTGPLLGASDPRIFIELL
ESLIGQHLAHLHLGAPFLFEPGPQGGEVVDWLRLARACGLEVPEADASVELTVRQYRTWLLEQPEGANRALRELLLTTLP
VEQFAAEPRHHFGRDSMAVAPFGRPLEHYGDLLVQRLLQQVHTDGRDRKTPRSKVSVDLHSSNCHGLIDWPVLKPKVQKD
WEEALPGSVSHLSARLQQVHQAQADLEGFERIGRLGTQTEPLRGLITGVQSYGFFVAVEEPFVEGLVHVSGLKDDWYTFQ
AREPALIGRRSRRRFQIGDTVTVKVKGIDYYRQQVDLMVVRDESEPPTEEGTEAPLLAAPEA

Sequences:

>Translated_702_residues
MGMQFSVHDLLGLLSPERSVAPKVLQQKLSLDDGAALAQLQLVLDALEKVGLIEKMQGRYRLVANEEIVGGRLRCSSKGF
CFVTPEQPEAEEIFVVEGSLKNAWNGDRVLVRLLKKASRRRKPEGEVVLVTERAHTALVGRLAEADAGEDKPKLLQVAPL
DDRLGSVLELVDAEIPDVAADLIVEVEITRYPLGRRPAKCRLLRVLGHANDPLVDLDLVASRYQLPLEFPQAVLDAAAQL
AASAAPEGREDLQALEVWALPGELLQTALSLVPTEGGWELGLHVSDVAVLVEAGSTLDAEAYRRGLAARLRDRSLRLWPD
ALLERCALLPDTGRSAWSVLVNLDTTGQVRAFRWTPSLVRARGRLESLSEPYAAVAAALAAQGTGPLLGASDPRIFIELL
ESLIGQHLAHLHLGAPFLFEPGPQGGEVVDWLRLARACGLEVPEADASVELTVRQYRTWLLEQPEGANRALRELLLTTLP
VEQFAAEPRHHFGRDSMAVAPFGRPLEHYGDLLVQRLLQQVHTDGRDRKTPRSKVSVDLHSSNCHGLIDWPVLKPKVQKD
WEEALPGSVSHLSARLQQVHQAQADLEGFERIGRLGTQTEPLRGLITGVQSYGFFVAVEEPFVEGLVHVSGLKDDWYTFQ
AREPALIGRRSRRRFQIGDTVTVKVKGIDYYRQQVDLMVVRDESEPPTEEGTEAPLLAAPEA
>Mature_701_residues
GMQFSVHDLLGLLSPERSVAPKVLQQKLSLDDGAALAQLQLVLDALEKVGLIEKMQGRYRLVANEEIVGGRLRCSSKGFC
FVTPEQPEAEEIFVVEGSLKNAWNGDRVLVRLLKKASRRRKPEGEVVLVTERAHTALVGRLAEADAGEDKPKLLQVAPLD
DRLGSVLELVDAEIPDVAADLIVEVEITRYPLGRRPAKCRLLRVLGHANDPLVDLDLVASRYQLPLEFPQAVLDAAAQLA
ASAAPEGREDLQALEVWALPGELLQTALSLVPTEGGWELGLHVSDVAVLVEAGSTLDAEAYRRGLAARLRDRSLRLWPDA
LLERCALLPDTGRSAWSVLVNLDTTGQVRAFRWTPSLVRARGRLESLSEPYAAVAAALAAQGTGPLLGASDPRIFIELLE
SLIGQHLAHLHLGAPFLFEPGPQGGEVVDWLRLARACGLEVPEADASVELTVRQYRTWLLEQPEGANRALRELLLTTLPV
EQFAAEPRHHFGRDSMAVAPFGRPLEHYGDLLVQRLLQQVHTDGRDRKTPRSKVSVDLHSSNCHGLIDWPVLKPKVQKDW
EEALPGSVSHLSARLQQVHQAQADLEGFERIGRLGTQTEPLRGLITGVQSYGFFVAVEEPFVEGLVHVSGLKDDWYTFQA
REPALIGRRSRRRFQIGDTVTVKVKGIDYYRQQVDLMVVRDESEPPTEEGTEAPLLAAPEA

Specific function: Not known; control resistance to the carbonic anhydrase inhibitor acetazolamide [H]

COG id: COG0557

COG function: function code K; Exoribonuclease R

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI190014623, Length=265, Percent_Identity=25.2830188679245, Blast_Score=76, Evalue=1e-13,
Organism=Homo sapiens, GI190014625, Length=265, Percent_Identity=25.2830188679245, Blast_Score=75, Evalue=2e-13,
Organism=Escherichia coli, GI87082383, Length=735, Percent_Identity=22.9931972789116, Blast_Score=132, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011129
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR022967
- InterPro:   IPR013223
- InterPro:   IPR001900
- InterPro:   IPR022966
- InterPro:   IPR011805 [H]

Pfam domain/function: PF08206 OB_RNB; PF00773 RNB; PF00575 S1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 77268; Mature: 77137

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMQFSVHDLLGLLSPERSVAPKVLQQKLSLDDGAALAQLQLVLDALEKVGLIEKMQGRY
CCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCE
RLVANEEIVGGRLRCSSKGFCFVTPEQPEAEEIFVVEGSLKNAWNGDRVLVRLLKKASRR
EEEECCCEECCEEEECCCCEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHC
RKPEGEVVLVTERAHTALVGRLAEADAGEDKPKLLQVAPLDDRLGSVLELVDAEIPDVAA
CCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCHHHH
DLIVEVEITRYPLGRRPAKCRLLRVLGHANDPLVDLDLVASRYQLPLEFPQAVLDAAAQL
CEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHH
AASAAPEGREDLQALEVWALPGELLQTALSLVPTEGGWELGLHVSDVAVLVEAGSTLDAE
HHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEECEEHHHEEEEEECCCCCCHH
AYRRGLAARLRDRSLRLWPDALLERCALLPDTGRSAWSVLVNLDTTGQVRAFRWTPSLVR
HHHHHHHHHHHCCCCEECHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEECCHHHHH
ARGRLESLSEPYAAVAAALAAQGTGPLLGASDPRIFIELLESLIGQHLAHLHLGAPFLFE
HHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEC
PGPQGGEVVDWLRLARACGLEVPEADASVELTVRQYRTWLLEQPEGANRALRELLLTTLP
CCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
VEQFAAEPRHHFGRDSMAVAPFGRPLEHYGDLLVQRLLQQVHTDGRDRKTPRSKVSVDLH
HHHHHCCHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE
SSNCHGLIDWPVLKPKVQKDWEEALPGSVSHLSARLQQVHQAQADLEGFERIGRLGTQTE
CCCCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
PLRGLITGVQSYGFFVAVEEPFVEGLVHVSGLKDDWYTFQAREPALIGRRSRRRFQIGDT
HHHHHHHHHHHCCEEEEECCHHHHHHHHHCCCCCCCEEEECCCCHHHCCCCCCEEECCCE
VTVKVKGIDYYRQQVDLMVVRDESEPPTEEGTEAPLLAAPEA
EEEEEECCHHHHHCEEEEEEECCCCCCCCCCCCCCCEECCCC
>Mature Secondary Structure 
GMQFSVHDLLGLLSPERSVAPKVLQQKLSLDDGAALAQLQLVLDALEKVGLIEKMQGRY
CCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCE
RLVANEEIVGGRLRCSSKGFCFVTPEQPEAEEIFVVEGSLKNAWNGDRVLVRLLKKASRR
EEEECCCEECCEEEECCCCEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHC
RKPEGEVVLVTERAHTALVGRLAEADAGEDKPKLLQVAPLDDRLGSVLELVDAEIPDVAA
CCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCHHHH
DLIVEVEITRYPLGRRPAKCRLLRVLGHANDPLVDLDLVASRYQLPLEFPQAVLDAAAQL
CEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHH
AASAAPEGREDLQALEVWALPGELLQTALSLVPTEGGWELGLHVSDVAVLVEAGSTLDAE
HHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEECEEHHHEEEEEECCCCCCHH
AYRRGLAARLRDRSLRLWPDALLERCALLPDTGRSAWSVLVNLDTTGQVRAFRWTPSLVR
HHHHHHHHHHHCCCCEECHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEECCHHHHH
ARGRLESLSEPYAAVAAALAAQGTGPLLGASDPRIFIELLESLIGQHLAHLHLGAPFLFE
HHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEC
PGPQGGEVVDWLRLARACGLEVPEADASVELTVRQYRTWLLEQPEGANRALRELLLTTLP
CCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
VEQFAAEPRHHFGRDSMAVAPFGRPLEHYGDLLVQRLLQQVHTDGRDRKTPRSKVSVDLH
HHHHHCCHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE
SSNCHGLIDWPVLKPKVQKDWEEALPGSVSHLSARLQQVHQAQADLEGFERIGRLGTQTE
CCCCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
PLRGLITGVQSYGFFVAVEEPFVEGLVHVSGLKDDWYTFQAREPALIGRRSRRRFQIGDT
HHHHHHHHHHHCCEEEEECCHHHHHHHHHCCCCCCCEEEECCCCHHHCCCCCCEEECCCE
VTVKVKGIDYYRQQVDLMVVRDESEPPTEEGTEAPLLAAPEA
EEEEEECCHHHHHCEEEEEEECCCCCCCCCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7727754; 8905231 [H]