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The map label for this gene is glgB [H]

Identifier: 37521000

GI number: 37521000

Start: 1535661

End: 1537394

Strand: Reverse

Name: glgB [H]

Synonym: gll1431

Alternate gene names: 37521000

Gene position: 1537394-1535661 (Counterclockwise)

Preceding gene: 37521001

Following gene: 37520997

Centisome position: 33.0

GC content: 59.69

Gene sequence:

>1734_bases
ATGTCATCGGTCTGCAATGGGGAGATTATGACGACGACCAAAGATCCGTCCGAGAGCAAGGTGCAGCCGCAGTCCGAAGC
AAAAGCCGATGCGAAGACCGGCATGATTCGCTTTCAACTGCTGGCCCCCTACAACGAAAAAGCGGCACTCGTAGGCTCAT
TCTCGAACTGGGAAGAGATCCCAATGGAGAAGGACGACAAGGGCTGCTTTTTCGTCGAGATCGATTTACCGGATGGTGAA
CATCAGTACAAGTTCAAGCTCGTTTCCAAGAGTTTCTTCTGCGAGGGCGAGACGGTGGCGATCGCCGACCCGTATGCCCG
CCAAGTCGATGAGAAAAACCGCGAAAATACCGTCATCCGCATCAAAGACGGCAAGCAAATCACCGACGAGTATGTCTGGG
AGCACGACGATGTGCCCCTTTCCCCGGACGACCATTTGATCATCTATGAACTGCACGTGAGCGCCTTTGGCGGCGACACG
TTCATCGATGCGATCCAACAGCTCGACTACCTGGTGGATCTGGGGGTCAACTGCGTGCAGTTGATGCCCGTCACCGAGTA
CCCGGGCGAGCACTACTGGGGTTACAACCCCCGCCATCCCTTTGCCCCCGAATCCTCCTACGGCAAGCCCGAAGATCTCA
AAGCCTTCGTGGACGCCTGTCACGAGCGCGGTTTTCGGGTCATCCTGGACATTGTCCTCAACCACTCCGAATCGGAAAGC
CCGCTCACGCGCATCGACTTTACCTACTGGTTCTATGCGCCGGGCACCGAGCCGGACGAACCGGGCAATGTCTGGGGACC
CAAGTTCAACCTCGAATTTTACGACGAGCACTACAAGCGCAACCCGGCCCGCGAATACCTCTACGATCTGGTCGATTACT
GGGTGCGCGAGTACCACATCGACGGCTACCGCATCGACGCCGCCGCCCAAATTAAATACTTCGATTTTCTGGGCGAAGTG
GCCAGGCGTTCGAAGGCCAATTCGGGGGGCAAACCCTTCTACCTCGTCGGCGAGCATATCCCCGAAAACCCGGCGATTAC
CGGTGCGGACGGCCCGATGGACGGCGCCTACCACGAGACTTACTACTGGATGATCGATGATCTGATGGTGCGCAACATGT
TCGACACCGACCAGATTGTCGACTCGATCAACCCCCTGCACCACGGCTATCCGGGGCCGAGCAACGCCGTCAACTTCTAC
GAAAACCACGACAAGCCCCGCCTGCTGCAGCGGCTGCGCGACGCGGGCATCAACGAAGAGGGCAGCTTCAAGCGCCTGGA
GTGCGCGGCGGCCTTGCTGATGACCTCGGTGGGTCTGCCGATGCTCTACCAGGGCCAGGCGATGGGCCAGGCCTATCCCC
AGGACGAGGAAGTGCACGCGGTGGAGTGGACACTGCTCGATCACGACCGGCACGTGGCGCTTCTGGAGCGCTACAAAGGT
CTCATCGACCTGCGGCGCGAGACCCAGGCGCTCTGGACCAACGAGATCGATTTTTTCCACATCGACCAAGAAGCGCGGGT
GATCGCCTACGTGCGCTTCAACGCCGAGGGCTCGCGGGTGGCGGTCGTCGCCCACCTGGGCGACGGCAACCTGGGCGATT
ACCAGGTGCCCTGCTTCCCCGAGGACGGCCACTGGTTCGAGAAGACCCGCCTCTACGAAGTCGACGTCGAAGGCGGCATC
CTCAACGTGCACTTGAGCGATTGGGACGTGCATGTCTTCCGCAACGGCGGCTGA

Upstream 100 bases:

>100_bases
GGGGTGAGAGGCTGGGAGGGAGCTATCGGTTCTACCGGCGGGTAGATACCGGGATTTGGGAGCTGTCCTACATTGCATAT
AGCAGAAACCGGCCTTGGAA

Downstream 100 bases:

>100_bases
CCCCCACAAACCCCCGACGCCTCACCACCCCCCTTCTCAAGGGGGGGCAGGGGGGGATCCCACCCCCTCAATCACCTGCC
AGGTCGCCTCGGCGGTGCGC

Product: alpha-glucanotransferase

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 577; Mature: 576

Protein sequence:

>577_residues
MSSVCNGEIMTTTKDPSESKVQPQSEAKADAKTGMIRFQLLAPYNEKAALVGSFSNWEEIPMEKDDKGCFFVEIDLPDGE
HQYKFKLVSKSFFCEGETVAIADPYARQVDEKNRENTVIRIKDGKQITDEYVWEHDDVPLSPDDHLIIYELHVSAFGGDT
FIDAIQQLDYLVDLGVNCVQLMPVTEYPGEHYWGYNPRHPFAPESSYGKPEDLKAFVDACHERGFRVILDIVLNHSESES
PLTRIDFTYWFYAPGTEPDEPGNVWGPKFNLEFYDEHYKRNPAREYLYDLVDYWVREYHIDGYRIDAAAQIKYFDFLGEV
ARRSKANSGGKPFYLVGEHIPENPAITGADGPMDGAYHETYYWMIDDLMVRNMFDTDQIVDSINPLHHGYPGPSNAVNFY
ENHDKPRLLQRLRDAGINEEGSFKRLECAAALLMTSVGLPMLYQGQAMGQAYPQDEEVHAVEWTLLDHDRHVALLERYKG
LIDLRRETQALWTNEIDFFHIDQEARVIAYVRFNAEGSRVAVVAHLGDGNLGDYQVPCFPEDGHWFEKTRLYEVDVEGGI
LNVHLSDWDVHVFRNGG

Sequences:

>Translated_577_residues
MSSVCNGEIMTTTKDPSESKVQPQSEAKADAKTGMIRFQLLAPYNEKAALVGSFSNWEEIPMEKDDKGCFFVEIDLPDGE
HQYKFKLVSKSFFCEGETVAIADPYARQVDEKNRENTVIRIKDGKQITDEYVWEHDDVPLSPDDHLIIYELHVSAFGGDT
FIDAIQQLDYLVDLGVNCVQLMPVTEYPGEHYWGYNPRHPFAPESSYGKPEDLKAFVDACHERGFRVILDIVLNHSESES
PLTRIDFTYWFYAPGTEPDEPGNVWGPKFNLEFYDEHYKRNPAREYLYDLVDYWVREYHIDGYRIDAAAQIKYFDFLGEV
ARRSKANSGGKPFYLVGEHIPENPAITGADGPMDGAYHETYYWMIDDLMVRNMFDTDQIVDSINPLHHGYPGPSNAVNFY
ENHDKPRLLQRLRDAGINEEGSFKRLECAAALLMTSVGLPMLYQGQAMGQAYPQDEEVHAVEWTLLDHDRHVALLERYKG
LIDLRRETQALWTNEIDFFHIDQEARVIAYVRFNAEGSRVAVVAHLGDGNLGDYQVPCFPEDGHWFEKTRLYEVDVEGGI
LNVHLSDWDVHVFRNGG
>Mature_576_residues
SSVCNGEIMTTTKDPSESKVQPQSEAKADAKTGMIRFQLLAPYNEKAALVGSFSNWEEIPMEKDDKGCFFVEIDLPDGEH
QYKFKLVSKSFFCEGETVAIADPYARQVDEKNRENTVIRIKDGKQITDEYVWEHDDVPLSPDDHLIIYELHVSAFGGDTF
IDAIQQLDYLVDLGVNCVQLMPVTEYPGEHYWGYNPRHPFAPESSYGKPEDLKAFVDACHERGFRVILDIVLNHSESESP
LTRIDFTYWFYAPGTEPDEPGNVWGPKFNLEFYDEHYKRNPAREYLYDLVDYWVREYHIDGYRIDAAAQIKYFDFLGEVA
RRSKANSGGKPFYLVGEHIPENPAITGADGPMDGAYHETYYWMIDDLMVRNMFDTDQIVDSINPLHHGYPGPSNAVNFYE
NHDKPRLLQRLRDAGINEEGSFKRLECAAALLMTSVGLPMLYQGQAMGQAYPQDEEVHAVEWTLLDHDRHVALLERYKGL
IDLRRETQALWTNEIDFFHIDQEARVIAYVRFNAEGSRVAVVAHLGDGNLGDYQVPCFPEDGHWFEKTRLYEVDVEGGIL
NVHLSDWDVHVFRNGG

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=303, Percent_Identity=27.0627062706271, Blast_Score=80, Evalue=7e-15,
Organism=Escherichia coli, GI1789839, Length=577, Percent_Identity=22.7036395147314, Blast_Score=97, Evalue=4e-21,
Organism=Escherichia coli, GI2367229, Length=258, Percent_Identity=29.8449612403101, Blast_Score=86, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17554896, Length=287, Percent_Identity=28.9198606271777, Blast_Score=79, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI32564391, Length=223, Percent_Identity=27.8026905829596, Blast_Score=68, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6320826, Length=309, Percent_Identity=26.2135922330097, Blast_Score=77, Evalue=6e-15,
Organism=Drosophila melanogaster, GI28573410, Length=301, Percent_Identity=27.2425249169435, Blast_Score=77, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 66163; Mature: 66032

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVCNGEIMTTTKDPSESKVQPQSEAKADAKTGMIRFQLLAPYNEKAALVGSFSNWEEI
CCCCCCCEEEEECCCCCCCCCCCHHHHHCHHHCCEEEEEEECCCCCCEEEEECCCCHHHC
PMEKDDKGCFFVEIDLPDGEHQYKFKLVSKSFFCEGETVAIADPYARQVDEKNRENTVIR
CCCCCCCCEEEEEEECCCCCCEEEEEEECCEEECCCCEEEEECHHHHHHHCCCCCCCEEE
IKDGKQITDEYVWEHDDVPLSPDDHLIIYELHVSAFGGDTFIDAIQQLDYLVDLGVNCVQ
EECCCCCCHHHCCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEE
LMPVTEYPGEHYWGYNPRHPFAPESSYGKPEDLKAFVDACHERGFRVILDIVLNHSESES
EEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHCCCCCCC
PLTRIDFTYWFYAPGTEPDEPGNVWGPKFNLEFYDEHYKRNPAREYLYDLVDYWVREYHI
CCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHCC
DGYRIDAAAQIKYFDFLGEVARRSKANSGGKPFYLVGEHIPENPAITGADGPMDGAYHET
CCEEECCEEEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEECCCCCCCCCCCEE
YYWMIDDLMVRNMFDTDQIVDSINPLHHGYPGPSNAVNFYENHDKPRLLQRLRDAGINEE
EEEHHHHHHHHCCCCHHHHHHHCCHHHCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCCC
GSFKRLECAAALLMTSVGLPMLYQGQAMGQAYPQDEEVHAVEWTLLDHDRHVALLERYKG
CCCHHHHHHHHHHHHHCCCCEEECCCHHCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHH
LIDLRRETQALWTNEIDFFHIDQEARVIAYVRFNAEGSRVAVVAHLGDGNLGDYQVPCFP
HHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCCCEECCEEC
EDGHWFEKTRLYEVDVEGGILNVHLSDWDVHVFRNGG
CCCCEECCEEEEEEECCCCEEEEEECCCEEEEEECCC
>Mature Secondary Structure 
SSVCNGEIMTTTKDPSESKVQPQSEAKADAKTGMIRFQLLAPYNEKAALVGSFSNWEEI
CCCCCCEEEEECCCCCCCCCCCHHHHHCHHHCCEEEEEEECCCCCCEEEEECCCCHHHC
PMEKDDKGCFFVEIDLPDGEHQYKFKLVSKSFFCEGETVAIADPYARQVDEKNRENTVIR
CCCCCCCCEEEEEEECCCCCCEEEEEEECCEEECCCCEEEEECHHHHHHHCCCCCCCEEE
IKDGKQITDEYVWEHDDVPLSPDDHLIIYELHVSAFGGDTFIDAIQQLDYLVDLGVNCVQ
EECCCCCCHHHCCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEE
LMPVTEYPGEHYWGYNPRHPFAPESSYGKPEDLKAFVDACHERGFRVILDIVLNHSESES
EEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHCCCCCCC
PLTRIDFTYWFYAPGTEPDEPGNVWGPKFNLEFYDEHYKRNPAREYLYDLVDYWVREYHI
CCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHCC
DGYRIDAAAQIKYFDFLGEVARRSKANSGGKPFYLVGEHIPENPAITGADGPMDGAYHET
CCEEECCEEEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEECCCCCCCCCCCEE
YYWMIDDLMVRNMFDTDQIVDSINPLHHGYPGPSNAVNFYENHDKPRLLQRLRDAGINEE
EEEHHHHHHHHCCCCHHHHHHHCCHHHCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCCC
GSFKRLECAAALLMTSVGLPMLYQGQAMGQAYPQDEEVHAVEWTLLDHDRHVALLERYKG
CCCHHHHHHHHHHHHHCCCCEEECCCHHCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHH
LIDLRRETQALWTNEIDFFHIDQEARVIAYVRFNAEGSRVAVVAHLGDGNLGDYQVPCFP
HHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCCCEECCEEC
EDGHWFEKTRLYEVDVEGGILNVHLSDWDVHVFRNGG
CCCCEECCEEEEEEECCCCEEEEEECCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]