Click here to switch to the map view.

The map label for this gene is padR [H]

Identifier: 37520998

GI number: 37520998

Start: 1533926

End: 1534480

Strand: Direct

Name: padR [H]

Synonym: glr1429

Alternate gene names: 37520998

Gene position: 1533926-1534480 (Clockwise)

Preceding gene: 37520994

Following gene: 37520999

Centisome position: 32.92

GC content: 62.34

Gene sequence:

>555_bases
ATGGCACTGGCGCACGCGATACTGGCACTGCTGGCGGACCGCTCCTTCAGCGGTTACGAGTTGACTAAAGAATTCGAAGG
CTCGGTGGGGTGTTTCTGGAAAGCGACCCACCAGCAGATTTACCGGGAGTTGGCGGCGCTTGAGGAGCGCGCTTTCGTGC
ACGCGGATCTGGTCACCCAGGAAGGACGGCCCAACAAGAAGCTCTACGAATTGACGGAGGCGGGCAAGCGCTGGCTTTCC
GAGTGGCTGGCCGAGCCGAGCGAACCGTGCGTGATCCGCGAGGACATGCTAGTCAAAATGTTCGCGGGTTATCTCACCTC
CCCGGAGGTGCTCATCGCCGAAATCGAAAGGCGCAAGGCCTTGCACGCCGAGAAGCTCGAGTACTACCGACAGGTCGAGC
GGGAGCACTTCGGCGATCTGAGCACCATACCGATCGAGAAGCGCTTCGGGTACCTTTCGCTCAAGCGCGGGCTGCGCTAT
GAAGCGGACTGGGTGGCGTGGTGCGACGAAGCGGCGGCCCTGCTGCACTCCCCCACCTTCGCACCGCCCGGGTAA

Upstream 100 bases:

>100_bases
ATCGAATTTGTCAAATGCAATTTGCTGCACTGCAACTCATTGCATATTGGCAGTTTAGATGCAACAATTTGCATAAGTCA
AGCCCCCGGATCAAAATCAC

Downstream 100 bases:

>100_bases
ACCCCGATACAATCGGGTCCGGTGTTCGCTGTCCTGCACTATGGCCCTGACGGTCGTCTTCAACGGAAATTATCTGTCGC
TGCGGCCTACCGGCATCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MALAHAILALLADRSFSGYELTKEFEGSVGCFWKATHQQIYRELAALEERAFVHADLVTQEGRPNKKLYELTEAGKRWLS
EWLAEPSEPCVIREDMLVKMFAGYLTSPEVLIAEIERRKALHAEKLEYYRQVEREHFGDLSTIPIEKRFGYLSLKRGLRY
EADWVAWCDEAAALLHSPTFAPPG

Sequences:

>Translated_184_residues
MALAHAILALLADRSFSGYELTKEFEGSVGCFWKATHQQIYRELAALEERAFVHADLVTQEGRPNKKLYELTEAGKRWLS
EWLAEPSEPCVIREDMLVKMFAGYLTSPEVLIAEIERRKALHAEKLEYYRQVEREHFGDLSTIPIEKRFGYLSLKRGLRY
EADWVAWCDEAAALLHSPTFAPPG
>Mature_183_residues
ALAHAILALLADRSFSGYELTKEFEGSVGCFWKATHQQIYRELAALEERAFVHADLVTQEGRPNKKLYELTEAGKRWLSE
WLAEPSEPCVIREDMLVKMFAGYLTSPEVLIAEIERRKALHAEKLEYYRQVEREHFGDLSTIPIEKRFGYLSLKRGLRYE
ADWVAWCDEAAALLHSPTFAPPG

Specific function: Negative transcriptional regulator of padC phenolic acid decarboxylase [H]

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018309
- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR; PF10400 Vir_act_alpha_C [H]

EC number: NA

Molecular weight: Translated: 21147; Mature: 21016

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALAHAILALLADRSFSGYELTKEFEGSVGCFWKATHQQIYRELAALEERAFVHADLVTQ
CHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
EGRPNKKLYELTEAGKRWLSEWLAEPSEPCVIREDMLVKMFAGYLTSPEVLIAEIERRKA
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LHAEKLEYYRQVEREHFGDLSTIPIEKRFGYLSLKRGLRYEADWVAWCDEAAALLHSPTF
HHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
APPG
CCCC
>Mature Secondary Structure 
ALAHAILALLADRSFSGYELTKEFEGSVGCFWKATHQQIYRELAALEERAFVHADLVTQ
HHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
EGRPNKKLYELTEAGKRWLSEWLAEPSEPCVIREDMLVKMFAGYLTSPEVLIAEIERRKA
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LHAEKLEYYRQVEREHFGDLSTIPIEKRFGYLSLKRGLRYEADWVAWCDEAAALLHSPTF
HHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
APPG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]