| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is btuB [H]
Identifier: 37520954
GI number: 37520954
Start: 1484209
End: 1486896
Strand: Direct
Name: btuB [H]
Synonym: glr1385
Alternate gene names: 37520954
Gene position: 1484209-1486896 (Clockwise)
Preceding gene: 37520952
Following gene: 37520955
Centisome position: 31.86
GC content: 62.5
Gene sequence:
>2688_bases ATGGAAATGAATAATACGATCCAACGCAAGTTGGGATCAGGTTTAGTCTGGGCGGCACTGCTGCCTGCTATGTCCACCGG TCTGTTGAACTCAGCAGCATTTGCTCAACCCGACCAGATTGCCGGTCTGCCCCAAAATGCCGTTGCTCGCGCCGCAGAAG CGAAAAGTCAAACCCTGAGCATCGAAGGGGCCAAGCAGCTTCTCGAAAAGTCCAGCGCTAAAGCTAACGATCTGACTTAC CGCCCGGCGATGTGGGACTGGACAACACCCGCCACGGTCCAGAGCGGCGGGGAACCGCAGACCGCCCAGGCGACCCCGTC TACCCCGCCTGCCGCTGAACCGGCACCTGCCGATCCTGCTGCCGAACCCAATGAGCAGACCGATATTCTCGACGAAGTGT CGGTGACCGCCACCCGCAGGCTCACCCGGGCGCGCGACACCACCGCGACCACCTACACCATCAACCGGGAAGACTTCCAG AAGCAGGGGGCCACCACCGTCACCGACGCGCTGCTGTTGGTGCCCGGCTTCGTCGGACAGCCCTCCCTGGGCGGTGTTCG CAACGCTGCGGGCAACTTTTTGCGCGGTTTTGACGACCAACGCTTCCAGGTGCTCAAAGACGGCTTACCCTTGCAGCGTT CCTCCAACAACCGCACCGACGTCTCCCGCTTCCAGGTAGCCGACCTCGAACGCATTGAAGTGGTCACCGGCGGGGCGACG CTGCGCTACGGCTCCGGTGCGGTGGGCGGGGTGATCAACCTCATTACCGAGACGCCCAAGGGGCCGCCGAAGCTGACGCT CTCTTACGAAGCGGGCAGCTACGGATTTTCGCGCTATCTCGCCAAGTACGGCGGGGGCGACGACACCTTCAGCTACAACC TGGTCTTCACCAGCACCGTCGCTTTCAACAACTATCCCTTTTCTTACACCCTGCCCAACTCCGCCCAGTTCTATCCGCAG GGCACGCTCGTGCCGAACCCCAACTTCGCCTCCGACCCGGAGAACCAGCCGGAGACGGTCGACCTGTTCGGTTATCTGCA GCCCGAAGTGGGACCGCCCATCAAGGTACAGGGGACGGCCGATGTGGCCTTCAACGCCAGCGACACCTACTCGGGCAAGC TGACCTTCAAGCCCGATCCGAGCAACCGCCTGACTTTCCGGGTCAGCCAGCAGAATAGCCGCAACGCCCAGAACGGGCCG GGAACCTACAGCTTCAGCACCTGCTTCGGCGGGCCGAGCGCTTCACCCAACGGCACGTTGAACCTGGAGCGCTTCTTGCC CCTGGACGCCAACGGCAACGAGGTCGCCTGCAGCCCGCAGCGCTTTTTGGTCAACACCCGCTCCAACCTGCTGACCTTCG GCGGCTCTCCTTTTACTTATACCCAGTCGCTCTCGGGGGTGCCTCTGGCCCCCGGGCAGGCCTACCCGACGGCGGAAGGG GCGATTGGCACCATCGACTTTTTCGCGGTGACCAGCCAGTCACAGACGGAAGTGGCCCTGCAGTGGGACTACGACATCAC CCCGACCACCAGCCTCAACAGCTACATCTACTACTTCAAGTTCTCCGGCAACGGCAGCCGCCCCCCCCAGTTCGGCGTCA ATACCAATATTCTGGGCGGCGCTCCCGCTCTATCGCTCGGTCCGCTTTCCCAGCCCTTTTTCGAAGGCCAGCTCTTTGCC ATCGAGTCGGTGCTCAACCACCGCTTCAGCCCCGGCGGCAACATCCAGTTTGGTGTGAACGTCCGCGAGGACCGTTCCTA CCAGCAAAAAGCGGGCGGCAGCACCTTCTTCGACCGGGCCTTCACCCGCTCCTCGGTCTTCGCCATTGCCGACATCAGCT TCAGCGACCAGTTCAAGGCCAACCTGGGCGCCCGATTCACCTACTCGAACCAGTACGGCACGGTGGGCACCCCGGCGGTG GGTCTGCGCTACACGCCCGCCAACTTCATCTCGTTCCGCACCAACTACTCCTACGTTTTCAACTCGCCCAGCCTGTCGGA CCTGTTCGTGGGCAGTCCGCAAGGACCGTTCTTTCAGAACCCGAATCTGCGGCCGGAGGCGGGCGTCACCTGGGACGCGG GCATCGACCTCACGCCGGCCCCCAACGTCGGCATCCGCGCCACCTACTTCAACACCTACCTCGACGGGGTGATCAGCACG GTCGTCTTCCCCAACCCGGACTTCATCAACTTCGCCCTCACCCCCGGATTTACGCCCTTTTTGCAGCAGCAGCGCAACCT GGCCAGCCGTTACGCCTCGGGCCTCGAGGTGGACGCCAGGTGGCAGGTGAATCCCGAGGTGTCGCTGCGGGCGGTGTGGA CGAACCAGGACGCACGGGCCTACGGATTTACAGACAGCATCGACCAATCGACCTTCCCGTTCTTCTACGGATTCCAAGAT CCCAACATTCCCTTCAACAACGTGGTCGTCTCGGCCACCTACGCCACCAAGGGGCTGACGGCGACACTGCTGGGCCGCTA CGACAGCGGCAAGCGGCGCTTCGCTTCGACGGAATATATACCTGACTGGTTCACGCTGGACTTGAACGTGGAGGTGCCGA TCACGTCGTTCTTTATCCTGACGGGCAGCGTCTTTAACATCACCGATACGCAGTACCAGTACCTCGACGGCATCCCGGCA CCGGGGACAACCTTCCGGGTGGGCGGGCGCTTCGAGATTGGTGGCTGA
Upstream 100 bases:
>100_bases TTCACGCTGATCGACAATTCAAGTCCCAATCTGGTATTAGACTAAAGAATCCCGCTTTCGCAAGGTGGGACTCATGGATT TCCACTGTGGTATGGAGTGA
Downstream 100 bases:
>100_bases CGTTACCAGCAAGAGAAAACGATTCGTTCGTTGTTTGGGACATAGATTCTGAGCCAGAACAAAAACATCGGTCCATTTGG GCCGATGTTTTTGTTCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Cobalamin receptor; Outer membrane cobalamin translocator [H]
Number of amino acids: Translated: 895; Mature: 895
Protein sequence:
>895_residues MEMNNTIQRKLGSGLVWAALLPAMSTGLLNSAAFAQPDQIAGLPQNAVARAAEAKSQTLSIEGAKQLLEKSSAKANDLTY RPAMWDWTTPATVQSGGEPQTAQATPSTPPAAEPAPADPAAEPNEQTDILDEVSVTATRRLTRARDTTATTYTINREDFQ KQGATTVTDALLLVPGFVGQPSLGGVRNAAGNFLRGFDDQRFQVLKDGLPLQRSSNNRTDVSRFQVADLERIEVVTGGAT LRYGSGAVGGVINLITETPKGPPKLTLSYEAGSYGFSRYLAKYGGGDDTFSYNLVFTSTVAFNNYPFSYTLPNSAQFYPQ GTLVPNPNFASDPENQPETVDLFGYLQPEVGPPIKVQGTADVAFNASDTYSGKLTFKPDPSNRLTFRVSQQNSRNAQNGP GTYSFSTCFGGPSASPNGTLNLERFLPLDANGNEVACSPQRFLVNTRSNLLTFGGSPFTYTQSLSGVPLAPGQAYPTAEG AIGTIDFFAVTSQSQTEVALQWDYDITPTTSLNSYIYYFKFSGNGSRPPQFGVNTNILGGAPALSLGPLSQPFFEGQLFA IESVLNHRFSPGGNIQFGVNVREDRSYQQKAGGSTFFDRAFTRSSVFAIADISFSDQFKANLGARFTYSNQYGTVGTPAV GLRYTPANFISFRTNYSYVFNSPSLSDLFVGSPQGPFFQNPNLRPEAGVTWDAGIDLTPAPNVGIRATYFNTYLDGVIST VVFPNPDFINFALTPGFTPFLQQQRNLASRYASGLEVDARWQVNPEVSLRAVWTNQDARAYGFTDSIDQSTFPFFYGFQD PNIPFNNVVVSATYATKGLTATLLGRYDSGKRRFASTEYIPDWFTLDLNVEVPITSFFILTGSVFNITDTQYQYLDGIPA PGTTFRVGGRFEIGG
Sequences:
>Translated_895_residues MEMNNTIQRKLGSGLVWAALLPAMSTGLLNSAAFAQPDQIAGLPQNAVARAAEAKSQTLSIEGAKQLLEKSSAKANDLTY RPAMWDWTTPATVQSGGEPQTAQATPSTPPAAEPAPADPAAEPNEQTDILDEVSVTATRRLTRARDTTATTYTINREDFQ KQGATTVTDALLLVPGFVGQPSLGGVRNAAGNFLRGFDDQRFQVLKDGLPLQRSSNNRTDVSRFQVADLERIEVVTGGAT LRYGSGAVGGVINLITETPKGPPKLTLSYEAGSYGFSRYLAKYGGGDDTFSYNLVFTSTVAFNNYPFSYTLPNSAQFYPQ GTLVPNPNFASDPENQPETVDLFGYLQPEVGPPIKVQGTADVAFNASDTYSGKLTFKPDPSNRLTFRVSQQNSRNAQNGP GTYSFSTCFGGPSASPNGTLNLERFLPLDANGNEVACSPQRFLVNTRSNLLTFGGSPFTYTQSLSGVPLAPGQAYPTAEG AIGTIDFFAVTSQSQTEVALQWDYDITPTTSLNSYIYYFKFSGNGSRPPQFGVNTNILGGAPALSLGPLSQPFFEGQLFA IESVLNHRFSPGGNIQFGVNVREDRSYQQKAGGSTFFDRAFTRSSVFAIADISFSDQFKANLGARFTYSNQYGTVGTPAV GLRYTPANFISFRTNYSYVFNSPSLSDLFVGSPQGPFFQNPNLRPEAGVTWDAGIDLTPAPNVGIRATYFNTYLDGVIST VVFPNPDFINFALTPGFTPFLQQQRNLASRYASGLEVDARWQVNPEVSLRAVWTNQDARAYGFTDSIDQSTFPFFYGFQD PNIPFNNVVVSATYATKGLTATLLGRYDSGKRRFASTEYIPDWFTLDLNVEVPITSFFILTGSVFNITDTQYQYLDGIPA PGTTFRVGGRFEIGG >Mature_895_residues MEMNNTIQRKLGSGLVWAALLPAMSTGLLNSAAFAQPDQIAGLPQNAVARAAEAKSQTLSIEGAKQLLEKSSAKANDLTY RPAMWDWTTPATVQSGGEPQTAQATPSTPPAAEPAPADPAAEPNEQTDILDEVSVTATRRLTRARDTTATTYTINREDFQ KQGATTVTDALLLVPGFVGQPSLGGVRNAAGNFLRGFDDQRFQVLKDGLPLQRSSNNRTDVSRFQVADLERIEVVTGGAT LRYGSGAVGGVINLITETPKGPPKLTLSYEAGSYGFSRYLAKYGGGDDTFSYNLVFTSTVAFNNYPFSYTLPNSAQFYPQ GTLVPNPNFASDPENQPETVDLFGYLQPEVGPPIKVQGTADVAFNASDTYSGKLTFKPDPSNRLTFRVSQQNSRNAQNGP GTYSFSTCFGGPSASPNGTLNLERFLPLDANGNEVACSPQRFLVNTRSNLLTFGGSPFTYTQSLSGVPLAPGQAYPTAEG AIGTIDFFAVTSQSQTEVALQWDYDITPTTSLNSYIYYFKFSGNGSRPPQFGVNTNILGGAPALSLGPLSQPFFEGQLFA IESVLNHRFSPGGNIQFGVNVREDRSYQQKAGGSTFFDRAFTRSSVFAIADISFSDQFKANLGARFTYSNQYGTVGTPAV GLRYTPANFISFRTNYSYVFNSPSLSDLFVGSPQGPFFQNPNLRPEAGVTWDAGIDLTPAPNVGIRATYFNTYLDGVIST VVFPNPDFINFALTPGFTPFLQQQRNLASRYASGLEVDARWQVNPEVSLRAVWTNQDARAYGFTDSIDQSTFPFFYGFQD PNIPFNNVVVSATYATKGLTATLLGRYDSGKRRFASTEYIPDWFTLDLNVEVPITSFFILTGSVFNITDTQYQYLDGIPA PGTTFRVGGRFEIGG
Specific function: Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TonB-dependent receptor family. BtuB (TC 1.B.14.3.1) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790405, Length=145, Percent_Identity=31.0344827586207, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1790743, Length=152, Percent_Identity=33.5526315789474, Blast_Score=64, Evalue=5e-11,
Paralogues:
None
Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010101 - InterPro: IPR010916 - InterPro: IPR010917 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 96987; Mature: 96987
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMNNTIQRKLGSGLVWAALLPAMSTGLLNSAAFAQPDQIAGLPQNAVARAAEAKSQTLS CCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHEEE IEGAKQLLEKSSAKANDLTYRPAMWDWTTPATVQSGGEPQTAQATPSTPPAAEPAPADPA HHHHHHHHHHCCCCCCCEEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCC AEPNEQTDILDEVSVTATRRLTRARDTTATTYTINREDFQKQGATTVTDALLLVPGFVGQ CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHCCCHHHHHHHHHCCCCCCC PSLGGVRNAAGNFLRGFDDQRFQVLKDGLPLQRSSNNRTDVSRFQVADLERIEVVTGGAT CCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHEEECCCEEEEEEECCEE LRYGSGAVGGVINLITETPKGPPKLTLSYEAGSYGFSRYLAKYGGGDDTFSYNLVFTSTV EEECCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEEEEEEE AFNNYPFSYTLPNSAQFYPQGTLVPNPNFASDPENQPETVDLFGYLQPEVGPPIKVQGTA EECCCCEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECC DVAFNASDTYSGKLTFKPDPSNRLTFRVSQQNSRNAQNGPGTYSFSTCFGGPSASPNGTL EEEECCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCEE NLERFLPLDANGNEVACSPQRFLVNTRSNLLTFGGSPFTYTQSLSGVPLAPGQAYPTAEG EEHEEEEECCCCCEEEECCHHEEEECCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCC AIGTIDFFAVTSQSQTEVALQWDYDITPTTSLNSYIYYFKFSGNGSRPPQFGVNTNILGG CEEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC APALSLGPLSQPFFEGQLFAIESVLNHRFSPGGNIQFGVNVREDRSYQQKAGGSTFFDRA CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHCCCCHHHHHH FTRSSVFAIADISFSDQFKANLGARFTYSNQYGTVGTPAVGLRYTPANFISFRTNYSYVF HCCCCEEEEEECCCCCCHHHCCCEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCEEEE NSPSLSDLFVGSPQGPFFQNPNLRPEAGVTWDAGIDLTPAPNVGIRATYFNTYLDGVIST CCCCCCEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHH VVFPNPDFINFALTPGFTPFLQQQRNLASRYASGLEVDARWQVNPEVSLRAVWTNQDARA EECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEEECCCCEE YGFTDSIDQSTFPFFYGFQDPNIPFNNVVVSATYATKGLTATLLGRYDSGKRRFASTEYI ECCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCEECCCCCC PDWFTLDLNVEVPITSFFILTGSVFNITDTQYQYLDGIPAPGTTFRVGGRFEIGG CCEEEEEEEEECCCEEEEEEECCEEEECCCCHHHHCCCCCCCCEEEECCEEECCC >Mature Secondary Structure MEMNNTIQRKLGSGLVWAALLPAMSTGLLNSAAFAQPDQIAGLPQNAVARAAEAKSQTLS CCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHEEE IEGAKQLLEKSSAKANDLTYRPAMWDWTTPATVQSGGEPQTAQATPSTPPAAEPAPADPA HHHHHHHHHHCCCCCCCEEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCC AEPNEQTDILDEVSVTATRRLTRARDTTATTYTINREDFQKQGATTVTDALLLVPGFVGQ CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHCCCHHHHHHHHHCCCCCCC PSLGGVRNAAGNFLRGFDDQRFQVLKDGLPLQRSSNNRTDVSRFQVADLERIEVVTGGAT CCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHEEECCCEEEEEEECCEE LRYGSGAVGGVINLITETPKGPPKLTLSYEAGSYGFSRYLAKYGGGDDTFSYNLVFTSTV EEECCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEEEEEEE AFNNYPFSYTLPNSAQFYPQGTLVPNPNFASDPENQPETVDLFGYLQPEVGPPIKVQGTA EECCCCEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECC DVAFNASDTYSGKLTFKPDPSNRLTFRVSQQNSRNAQNGPGTYSFSTCFGGPSASPNGTL EEEECCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCEE NLERFLPLDANGNEVACSPQRFLVNTRSNLLTFGGSPFTYTQSLSGVPLAPGQAYPTAEG EEHEEEEECCCCCEEEECCHHEEEECCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCC AIGTIDFFAVTSQSQTEVALQWDYDITPTTSLNSYIYYFKFSGNGSRPPQFGVNTNILGG CEEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC APALSLGPLSQPFFEGQLFAIESVLNHRFSPGGNIQFGVNVREDRSYQQKAGGSTFFDRA CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHCCCCHHHHHH FTRSSVFAIADISFSDQFKANLGARFTYSNQYGTVGTPAVGLRYTPANFISFRTNYSYVF HCCCCEEEEEECCCCCCHHHCCCEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCEEEE NSPSLSDLFVGSPQGPFFQNPNLRPEAGVTWDAGIDLTPAPNVGIRATYFNTYLDGVIST CCCCCCEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHH VVFPNPDFINFALTPGFTPFLQQQRNLASRYASGLEVDARWQVNPEVSLRAVWTNQDARA EECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEEECCCCEE YGFTDSIDQSTFPFFYGFQDPNIPFNNVVVSATYATKGLTATLLGRYDSGKRRFASTEYI ECCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCEECCCCCC PDWFTLDLNVEVPITSFFILTGSVFNITDTQYQYLDGIPAPGTTFRVGGRFEIGG CCEEEEEEEEECCCEEEEEEECCEEEECCCCHHHHCCCCCCCCEEEECCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA