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The map label for this gene is fraH [H]

Identifier: 37520919

GI number: 37520919

Start: 1445106

End: 1445756

Strand: Direct

Name: fraH [H]

Synonym: glr1350

Alternate gene names: 37520919

Gene position: 1445106-1445756 (Clockwise)

Preceding gene: 37520918

Following gene: 37520920

Centisome position: 31.02

GC content: 65.28

Gene sequence:

>651_bases
GTGTGCCGAGCCGGCGGTCTCGCCACCCCCGCCGGGGCCTGTTCCACCGACTCCCTTCAAACCCCAGGAGATCAAGCTAT
GACGACCCTGTGCCCCGAATGCGGCACCCAGAACCCCGAAGGCACGCCCTACTGCATCGAGTGCGGCGCCGATCTCGCTC
AGGCGGCGGCCCAACCGGCCGGCCCCGGCGAACCGTCTTCTTCCCCATCACCGGAGGTTTCCATGACGTCTTCTTCAGAA
CCGCTGCGTCCCGCCGCCGAGCTGAACGGTGCCGCCAACGCGCGCATCGCTTCTCCGGCAACCTATCTGCAGTTGGAGCG
GGCCGTGCTCGTTCACCTTGCCACGGGCGAGCGCTTCGAAGTGCCGGTTACCCAGTCCTCGGTGGTGATCGGCAAGCCCA
ACGACGAGGTGAATGTCGATATCGACCTGTCCCACCTGGCGGGCGCCGACATCGTCTCGCGCATCCACGCGCTGGTGCGC
GAGGAGGAGGGCGATTTTTATCTGGAAGATGCCGGCAGCAGTAACGGCACTTTCCTCAACGGCGAAGCGCTCAAACCCGG
CGCCCGCTTCCGGCGCAAACTCCAACCGGGCGACACGCTGGCGCTGGGCAAAAACGAAAAGATCGCCTTTCGCTTCGAGA
TCACCGAGTAG

Upstream 100 bases:

>100_bases
TCCTGTGTGCCCAGCAAAACCGAGGGCAGCAACATCCTCAGCCTCAAAGCCACCAACCCGGCCGGTGCGCTCGTCCGCTC
GGTAACGATCGAGACCTACG

Downstream 100 bases:

>100_bases
CAAAAGCACGGCTCGAAGCCCGCAAAAATCCGAGCAGCGATTGTGGCCGCTGCCCTACGATGTTGCATCCACCGCGTCGA
GTTTCCCGGCTTCACGGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MCRAGGLATPAGACSTDSLQTPGDQAMTTLCPECGTQNPEGTPYCIECGADLAQAAAQPAGPGEPSSSPSPEVSMTSSSE
PLRPAAELNGAANARIASPATYLQLERAVLVHLATGERFEVPVTQSSVVIGKPNDEVNVDIDLSHLAGADIVSRIHALVR
EEEGDFYLEDAGSSNGTFLNGEALKPGARFRRKLQPGDTLALGKNEKIAFRFEITE

Sequences:

>Translated_216_residues
MCRAGGLATPAGACSTDSLQTPGDQAMTTLCPECGTQNPEGTPYCIECGADLAQAAAQPAGPGEPSSSPSPEVSMTSSSE
PLRPAAELNGAANARIASPATYLQLERAVLVHLATGERFEVPVTQSSVVIGKPNDEVNVDIDLSHLAGADIVSRIHALVR
EEEGDFYLEDAGSSNGTFLNGEALKPGARFRRKLQPGDTLALGKNEKIAFRFEITE
>Mature_216_residues
MCRAGGLATPAGACSTDSLQTPGDQAMTTLCPECGTQNPEGTPYCIECGADLAQAAAQPAGPGEPSSSPSPEVSMTSSSE
PLRPAAELNGAANARIASPATYLQLERAVLVHLATGERFEVPVTQSSVVIGKPNDEVNVDIDLSHLAGADIVSRIHALVR
EEEGDFYLEDAGSSNGTFLNGEALKPGARFRRKLQPGDTLALGKNEKIAFRFEITE

Specific function: Putative heterocyst to vegetative cell connection [H]

COG id: COG1716

COG function: function code T; FOG: FHA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FHA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000253
- InterPro:   IPR008984 [H]

Pfam domain/function: PF00498 FHA [H]

EC number: NA

Molecular weight: Translated: 22539; Mature: 22539

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS50006 FHA_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRAGGLATPAGACSTDSLQTPGDQAMTTLCPECGTQNPEGTPYCIECGADLAQAAAQPA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHCCCCCCCCCEEEECCCHHHHHHCCCC
GPGEPSSSPSPEVSMTSSSEPLRPAAELNGAANARIASPATYLQLERAVLVHLATGERFE
CCCCCCCCCCCCEEECCCCCCCCCHHHCCCCCCCEECCCHHHHHHHEEEEEEEECCCEEE
VPVTQSSVVIGKPNDEVNVDIDLSHLAGADIVSRIHALVREEEGDFYLEDAGSSNGTFLN
CCCCCCEEEEECCCCCEEEEEEHHHHCCHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEC
GEALKPGARFRRKLQPGDTLALGKNEKIAFRFEITE
CCCCCCHHHHHHHCCCCCEEEECCCCEEEEEEEECC
>Mature Secondary Structure
MCRAGGLATPAGACSTDSLQTPGDQAMTTLCPECGTQNPEGTPYCIECGADLAQAAAQPA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHCCCCCCCCCEEEECCCHHHHHHCCCC
GPGEPSSSPSPEVSMTSSSEPLRPAAELNGAANARIASPATYLQLERAVLVHLATGERFE
CCCCCCCCCCCCEEECCCCCCCCCHHHCCCCCCCEECCCHHHHHHHEEEEEEEECCCEEE
VPVTQSSVVIGKPNDEVNVDIDLSHLAGADIVSRIHALVREEEGDFYLEDAGSSNGTFLN
CCCCCCEEEEECCCCCEEEEEEHHHHCCHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEC
GEALKPGARFRRKLQPGDTLALGKNEKIAFRFEITE
CCCCCCHHHHHHHCCCCCEEEECCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]