| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is arnT [H]
Identifier: 37520900
GI number: 37520900
Start: 1423771
End: 1425603
Strand: Direct
Name: arnT [H]
Synonym: glr1331
Alternate gene names: 37520900
Gene position: 1423771-1425603 (Clockwise)
Preceding gene: 37520898
Following gene: 37520908
Centisome position: 30.56
GC content: 61.87
Gene sequence:
>1833_bases ATGTTACAATCCGTTGTTCAAGGTCAGGCGACAGAGAGCCCAGAGGCGATGCTGCAGTCATCGAAGCGCGCTCCTTCCTT TGCGGATGTTCTTACCAGCTTAGGTCTGATGGTCTACACCGCGCCGCTGCTGCTGCTGCACGCGGGCCGCCAGAGCCTGA TCGGCACCGACGAGGGCTACTACGCCCAGATGGCGCGCGAAATGATCCGTGGCGGCCAGTGGCTCGCCCCGAGCTTTCTG GGAGAACCCTGGTTCGAGAAGCCCCCCCTCAACCCCTGGCTGATTGCCATCAGCTTTCAGACGTTCGGAATTAGCGAATG GAGCGCCAGGCTGCCGAGCGTGATTGCCGGGGTGGCGGGAGTCTTGCTCACCTACTGGATTGGCCGGACGCTGGTGGGGC CGCGCCGGGCGCTACTTGGGGCACTGGTGCTGCCCACGATGTACCTGTGGTTGTTCTACGGGCGTGTGGCCGTCACCGAC GTCATCCTCACTACGCTCGAACTGGCGGGCCTGGGCTGTCTGCTGCTGGCCGTCCGGCCCGGCTGGAGAGCGCTCGCCGC CGGGTGGGGTATCGCCGTCGGGCTCGGATTGCTCCTCAAGACAACGATGATCCTGCTGCCGGCCGTCGCCACCTTGCCCT GGCTCATCTGGCGCAACCGCGAGCACCGTTTGCTCACCAACCCGTATCTTTATGCCGGACTCGCGGCCGGGGTGGGGCTG TTCGGCTCCTGGTACGCGACGGCCACGAACGTCTACGGCGCGCTCGTCTACGAACAGCTGTTCGGGCATCTGTTTAAGCT CGGCAACAAAGAATTTCATCCGGTGGGGCCGTTCTACTATTTCTGGAACTTACCGGCCAATACTTTCCCGTGGACCTTTC TGGCCCTGGGCGGAGTCTGGGCGCTCCAGCGCGAAAAAAAGGCGCCGTTGCTGCTCTGGAGCTATCCGCTGGTACTGCTG TCGCTGTTGCAGCTGTTTTCTACCAAAGAACCGTACTACTTGATCCAAGCTTGCCCGTTTATTGCCCTGCTGGCCGGGGT GTGGATCGACCATTGTTGGCAGCGCAGGCGCGGACGCTCCCTGGCCGCCACCAGCTTCCTGGTGGGAATGGTGGGTCTAT TGCTGGTTGTTGCGGCCCCAGTGCTTGCCTTCAACCCCACCTGGATAGACGGGGTGCAGCTTTATTTGCCCCTGGGCCTG GCTCTGGGGATTCTCTGGCTGGGGGTGCCGGTCTTCTTCCGGGTTCGGCGCAGCCTGCCCTCCGCCCAGACGCTCTGGAC GGTTTCGCTCATCGGCGGTCCGTACTTCGCCCTGCTGCTCGCGGTCCTCACCACCTTCCTGGGCGACTTCTATCCCGACT TCAAAGCCTTTTCCCAGCAGCGCCTCGCAGGCTACATCGATCCGGACGCTCCGATTGCCATGGTCTACGAAAAGAATGGC GAGCGGGTCTCAGAATTTATCGCCTTGACGTTCTACACTCCCAACCCGAGCGTGCAACTCGATGCGGCCGGGGTGCGCGC AGACGATACCCAGCGCCACTGGTGGCTCTCCCCCGAATCGCGCCAATTGCTCGACAAGTCGGGCTTTATCTACAAGCCGC TCGTCGAAGTCTTTGGCTGGACCCTTGCTCGGCGCGTCAATGCCGACAACTCCAGTTCCTCAGGTGTAAGTCTTCATGCA ATGGCTGCAAAACGGGGGGAGCCGAACCGCGTCTCAATAAGTAATGGTCATGTTGTTGGTGTTGGCCGCCTCCAGGATGT GTGGGCGCAGCCTGGGATCGTTCAGGGCGAAGGAGCGCTCATGAACCAAAGCGTTCGCAGCCCGCTCGTATAA
Upstream 100 bases:
>100_bases AGTACGCGCACCGATTCGGGATAGTCGCACTCGTGGGAGCGGCCTACCAGCCGAGAAGCAAGCCCCAGCACCGCCACGAT CTCAGTGGCGCTGGGTATCA
Downstream 100 bases:
>100_bases CGCGATAGATTCCTCGTCGTTGTGCGCGTTGTAGCAAAGAAGGCCGTCGATGTTGGGGTATGCATCGTAAAAGTAGCGCG ACCAGGACTGGCTTAACCCC
Product: hypothetical protein
Products: NA
Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]
Number of amino acids: Translated: 610; Mature: 610
Protein sequence:
>610_residues MLQSVVQGQATESPEAMLQSSKRAPSFADVLTSLGLMVYTAPLLLLHAGRQSLIGTDEGYYAQMAREMIRGGQWLAPSFL GEPWFEKPPLNPWLIAISFQTFGISEWSARLPSVIAGVAGVLLTYWIGRTLVGPRRALLGALVLPTMYLWLFYGRVAVTD VILTTLELAGLGCLLLAVRPGWRALAAGWGIAVGLGLLLKTTMILLPAVATLPWLIWRNREHRLLTNPYLYAGLAAGVGL FGSWYATATNVYGALVYEQLFGHLFKLGNKEFHPVGPFYYFWNLPANTFPWTFLALGGVWALQREKKAPLLLWSYPLVLL SLLQLFSTKEPYYLIQACPFIALLAGVWIDHCWQRRRGRSLAATSFLVGMVGLLLVVAAPVLAFNPTWIDGVQLYLPLGL ALGILWLGVPVFFRVRRSLPSAQTLWTVSLIGGPYFALLLAVLTTFLGDFYPDFKAFSQQRLAGYIDPDAPIAMVYEKNG ERVSEFIALTFYTPNPSVQLDAAGVRADDTQRHWWLSPESRQLLDKSGFIYKPLVEVFGWTLARRVNADNSSSSGVSLHA MAAKRGEPNRVSISNGHVVGVGRLQDVWAQPGIVQGEGALMNQSVRSPLV
Sequences:
>Translated_610_residues MLQSVVQGQATESPEAMLQSSKRAPSFADVLTSLGLMVYTAPLLLLHAGRQSLIGTDEGYYAQMAREMIRGGQWLAPSFL GEPWFEKPPLNPWLIAISFQTFGISEWSARLPSVIAGVAGVLLTYWIGRTLVGPRRALLGALVLPTMYLWLFYGRVAVTD VILTTLELAGLGCLLLAVRPGWRALAAGWGIAVGLGLLLKTTMILLPAVATLPWLIWRNREHRLLTNPYLYAGLAAGVGL FGSWYATATNVYGALVYEQLFGHLFKLGNKEFHPVGPFYYFWNLPANTFPWTFLALGGVWALQREKKAPLLLWSYPLVLL SLLQLFSTKEPYYLIQACPFIALLAGVWIDHCWQRRRGRSLAATSFLVGMVGLLLVVAAPVLAFNPTWIDGVQLYLPLGL ALGILWLGVPVFFRVRRSLPSAQTLWTVSLIGGPYFALLLAVLTTFLGDFYPDFKAFSQQRLAGYIDPDAPIAMVYEKNG ERVSEFIALTFYTPNPSVQLDAAGVRADDTQRHWWLSPESRQLLDKSGFIYKPLVEVFGWTLARRVNADNSSSSGVSLHA MAAKRGEPNRVSISNGHVVGVGRLQDVWAQPGIVQGEGALMNQSVRSPLV >Mature_610_residues MLQSVVQGQATESPEAMLQSSKRAPSFADVLTSLGLMVYTAPLLLLHAGRQSLIGTDEGYYAQMAREMIRGGQWLAPSFL GEPWFEKPPLNPWLIAISFQTFGISEWSARLPSVIAGVAGVLLTYWIGRTLVGPRRALLGALVLPTMYLWLFYGRVAVTD VILTTLELAGLGCLLLAVRPGWRALAAGWGIAVGLGLLLKTTMILLPAVATLPWLIWRNREHRLLTNPYLYAGLAAGVGL FGSWYATATNVYGALVYEQLFGHLFKLGNKEFHPVGPFYYFWNLPANTFPWTFLALGGVWALQREKKAPLLLWSYPLVLL SLLQLFSTKEPYYLIQACPFIALLAGVWIDHCWQRRRGRSLAATSFLVGMVGLLLVVAAPVLAFNPTWIDGVQLYLPLGL ALGILWLGVPVFFRVRRSLPSAQTLWTVSLIGGPYFALLLAVLTTFLGDFYPDFKAFSQQRLAGYIDPDAPIAMVYEKNG ERVSEFIALTFYTPNPSVQLDAAGVRADDTQRHWWLSPESRQLLDKSGFIYKPLVEVFGWTLARRVNADNSSSSGVSLHA MAAKRGEPNRVSISNGHVVGVGRLQDVWAQPGIVQGEGALMNQSVRSPLV
Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 83 family [H]
Homologues:
Organism=Escherichia coli, GI1788591, Length=322, Percent_Identity=25.776397515528, Blast_Score=82, Evalue=9e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022839 - InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: =2.4.2.43 [H]
Molecular weight: Translated: 67311; Mature: 67311
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQSVVQGQATESPEAMLQSSKRAPSFADVLTSLGLMVYTAPLLLLHAGRQSLIGTDEGY CCCHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCH YAQMAREMIRGGQWLAPSFLGEPWFEKPPLNPWLIAISFQTFGISEWSARLPSVIAGVAG HHHHHHHHHCCCCEECHHHCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHH VLLTYWIGRTLVGPRRALLGALVLPTMYLWLFYGRVAVTDVILTTLELAGLGCLLLAVRP HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC GWRALAAGWGIAVGLGLLLKTTMILLPAVATLPWLIWRNREHRLLTNPYLYAGLAAGVGL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHH FGSWYATATNVYGALVYEQLFGHLFKLGNKEFHPVGPFYYFWNLPANTFPWTFLALGGVW HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCHH ALQREKKAPLLLWSYPLVLLSLLQLFSTKEPYYLIQACPFIALLAGVWIDHCWQRRRGRS HHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCC LAATSFLVGMVGLLLVVAAPVLAFNPTWIDGVQLYLPLGLALGILWLGVPVFFRVRRSLP HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SAQTLWTVSLIGGPYFALLLAVLTTFLGDFYPDFKAFSQQRLAGYIDPDAPIAMVYEKNG CCHHEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEECCC ERVSEFIALTFYTPNPSVQLDAAGVRADDTQRHWWLSPESRQLLDKSGFIYKPLVEVFGW HHEEEEEEEEEECCCCCEEEECCCCCCCCCCCEEECCCHHHHHHHCCCCHHHHHHHHHHH TLARRVNADNSSSSGVSLHAMAAKRGEPNRVSISNGHVVGVGRLQDVWAQPGIVQGEGAL HHHHHCCCCCCCCCCEEEEEEHHCCCCCCEEEECCCCEEEECHHHHHHCCCCEECCCCHH MNQSVRSPLV HHHHHCCCCC >Mature Secondary Structure MLQSVVQGQATESPEAMLQSSKRAPSFADVLTSLGLMVYTAPLLLLHAGRQSLIGTDEGY CCCHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCH YAQMAREMIRGGQWLAPSFLGEPWFEKPPLNPWLIAISFQTFGISEWSARLPSVIAGVAG HHHHHHHHHCCCCEECHHHCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHH VLLTYWIGRTLVGPRRALLGALVLPTMYLWLFYGRVAVTDVILTTLELAGLGCLLLAVRP HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC GWRALAAGWGIAVGLGLLLKTTMILLPAVATLPWLIWRNREHRLLTNPYLYAGLAAGVGL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHH FGSWYATATNVYGALVYEQLFGHLFKLGNKEFHPVGPFYYFWNLPANTFPWTFLALGGVW HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCHH ALQREKKAPLLLWSYPLVLLSLLQLFSTKEPYYLIQACPFIALLAGVWIDHCWQRRRGRS HHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCC LAATSFLVGMVGLLLVVAAPVLAFNPTWIDGVQLYLPLGLALGILWLGVPVFFRVRRSLP HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SAQTLWTVSLIGGPYFALLLAVLTTFLGDFYPDFKAFSQQRLAGYIDPDAPIAMVYEKNG CCHHEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEECCC ERVSEFIALTFYTPNPSVQLDAAGVRADDTQRHWWLSPESRQLLDKSGFIYKPLVEVFGW HHEEEEEEEEEECCCCCEEEECCCCCCCCCCCEEECCCHHHHHHHCCCCHHHHHHHHHHH TLARRVNADNSSSSGVSLHAMAAKRGEPNRVSISNGHVVGVGRLQDVWAQPGIVQGEGAL HHHHHCCCCCCCCCCEEEEEEHHCCCCCCEEEECCCCEEEECHHHHHHCCCCEECCCCHH MNQSVRSPLV HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA