Definition Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession NC_005125
Length 4,659,019

Click here to switch to the map view.

The map label for this gene is 37520883

Identifier: 37520883

GI number: 37520883

Start: 1407237

End: 1407752

Strand: Reverse

Name: 37520883

Synonym: gll1314

Alternate gene names: NA

Gene position: 1407752-1407237 (Counterclockwise)

Preceding gene: 37520884

Following gene: 37520882

Centisome position: 30.22

GC content: 63.95

Gene sequence:

>516_bases
ATGAAACTGTCTTTGGCCTTGAGTGCGTGTGCCCTAGTGCTGTTGTCTGCCGCTCCGTTGAGCGCCATCGTCGCCAACGG
GGAAACTTTCTTCAGCGTCGTGCCCAAGCTCACCCGCGCCATGACGACCAACGTCAGCGCCTCGTACAACACCGCGACCT
ACACCTTCGACGTCGCTGTCCCCTCCGACAGCGGCGAACCCCTCGGCGGCCTGATCGTGGGCATTCCCCGGCGCGTGCGC
GTTCCTGACCCCGGCCAGATCCGGGTGTTGAGCGGGGGCACTTCGGTACCGCTGCAAGTCGAGAGCCTAAGCGGGCAGCG
CCTGCGGTTGAACCTGCAAAAGCCGGTCAGCCCGGGCCAGGCGGTTACTATCGAACTTTCGACGATGCGCAACCCCCGCG
GCGGCGGCACGTACTTGTTTGAAATCAACGCCCAACCCGCCGGCACCAACCCGTTTACCTACTTTCTCGGCTTCGGCCGG
TTGGAGTTCTTTGCCGGCGGTAGCGGCAGCAGCTAG

Upstream 100 bases:

>100_bases
GCCGGAGCATTGTATCTAGTGTTACAAATCATGCTCAGGGATGGACAGCAGAGCGCTTTGGGTATACGAGTAAGTTTGCT
GGATCCAGGGAGCTTTCTGC

Downstream 100 bases:

>100_bases
CAGCGGCGGTGGCGACGGGTTTTTGGTGCAATTACAAATTGGGTAAGGGCAATTTGCATTTGTGCTATTATCCGACGTCT
GTTCGCGCCAAGCAGCAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MKLSLALSACALVLLSAAPLSAIVANGETFFSVVPKLTRAMTTNVSASYNTATYTFDVAVPSDSGEPLGGLIVGIPRRVR
VPDPGQIRVLSGGTSVPLQVESLSGQRLRLNLQKPVSPGQAVTIELSTMRNPRGGGTYLFEINAQPAGTNPFTYFLGFGR
LEFFAGGSGSS

Sequences:

>Translated_171_residues
MKLSLALSACALVLLSAAPLSAIVANGETFFSVVPKLTRAMTTNVSASYNTATYTFDVAVPSDSGEPLGGLIVGIPRRVR
VPDPGQIRVLSGGTSVPLQVESLSGQRLRLNLQKPVSPGQAVTIELSTMRNPRGGGTYLFEINAQPAGTNPFTYFLGFGR
LEFFAGGSGSS
>Mature_171_residues
MKLSLALSACALVLLSAAPLSAIVANGETFFSVVPKLTRAMTTNVSASYNTATYTFDVAVPSDSGEPLGGLIVGIPRRVR
VPDPGQIRVLSGGTSVPLQVESLSGQRLRLNLQKPVSPGQAVTIELSTMRNPRGGGTYLFEINAQPAGTNPFTYFLGFGR
LEFFAGGSGSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17850; Mature: 17850

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSLALSACALVLLSAAPLSAIVANGETFFSVVPKLTRAMTTNVSASYNTATYTFDVAV
CEEEHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEE
PSDSGEPLGGLIVGIPRRVRVPDPGQIRVLSGGTSVPLQVESLSGQRLRLNLQKPVSPGQ
CCCCCCCCCEEEEECCCEEECCCCCEEEEEECCCCCCEEEECCCCCEEEEEECCCCCCCC
AVTIELSTMRNPRGGGTYLFEINAQPAGTNPFTYFLGFGRLEFFAGGSGSS
EEEEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEECCEEEEEECCCCCC
>Mature Secondary Structure
MKLSLALSACALVLLSAAPLSAIVANGETFFSVVPKLTRAMTTNVSASYNTATYTFDVAV
CEEEHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEE
PSDSGEPLGGLIVGIPRRVRVPDPGQIRVLSGGTSVPLQVESLSGQRLRLNLQKPVSPGQ
CCCCCCCCCEEEEECCCEEECCCCCEEEEEECCCCCCEEEECCCCCEEEEEECCCCCCCC
AVTIELSTMRNPRGGGTYLFEINAQPAGTNPFTYFLGFGRLEFFAGGSGSS
EEEEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEECCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA